RNA–Protein interactions for RNA: ENST00000551316.1

SNRPF-203, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-203ENST00000551316 ADCY9O60503 1353 aa20.56■□□□□ 0.88
SNRPF-203ENST00000551316 RGPD5Q99666 1765 aa20.55■□□□□ 0.88
SNRPF-203ENST00000551316 CFAP70Q5T0N1 1121 aa20.55■□□□□ 0.88
SNRPF-203ENST00000551316 CPDO75976 1380 aa20.55■□□□□ 0.88
SNRPF-203ENST00000551316 PCNTO95613 3336 aa20.54■□□□□ 0.88
SNRPF-203ENST00000551316 ZNF827Q17R98 1081 aa20.54■□□□□ 0.88
SNRPF-203ENST00000551316 THRAP3Q9Y2W1 955 aaKnown RBP20.54■□□□□ 0.88
SNRPF-203ENST00000551316 AATKQ6ZMQ8 1374 aa20.54■□□□□ 0.88
SNRPF-203ENST00000551316 MINK1Q8N4C8 1332 aaPredicted RBP20.53■□□□□ 0.88
SNRPF-203ENST00000551316 NGDNQ8NEJ9 315 aaKnown RBP20.53■□□□□ 0.88
SNRPF-203ENST00000551316 ARHGEF28Q8N1W1 1705 aaKnown RBP20.53■□□□□ 0.88
SNRPF-203ENST00000551316 BCL9O00512 1426 aa20.53■□□□□ 0.88
SNRPF-203ENST00000551316 COL13A1Q5TAT6 717 aaPredicted RBP20.52■□□□□ 0.88
SNRPF-203ENST00000551316 C14orf93Q9H972 538 aaKnown RBP20.52■□□□□ 0.88
SNRPF-203ENST00000551316 ZNF526Q8TF50 670 aaPredicted RBP20.51■□□□□ 0.87
SNRPF-203ENST00000551316 WDR90Q96KV7 1748 aa20.5■□□□□ 0.87
SNRPF-203ENST00000551316 USP19O94966 1318 aa20.5■□□□□ 0.87
SNRPF-203ENST00000551316 DDB1Q16531 1140 aa20.49■□□□□ 0.87
SNRPF-203ENST00000551316 C11orf95C9JLR9 678 aaPredicted RBP20.47■□□□□ 0.87
SNRPF-203ENST00000551316 POGKQ9P215 609 aa20.47■□□□□ 0.87
SNRPF-203ENST00000551316 SLC4A1APQ9BWU0 796 aaKnown RBP20.46■□□□□ 0.87
SNRPF-203ENST00000551316 GPBP1L1Q9HC44 474 aaPredicted RBP20.46■□□□□ 0.87
SNRPF-203ENST00000551316 EIF3AQ14152 1382 aaKnown RBP20.46■□□□□ 0.87
SNRPF-203ENST00000551316 WASLO00401 505 aaPredicted RBP20.45■□□□□ 0.86
SNRPF-203ENST00000551316 DNAJC5GQ8N7S2 189 aa20.45■□□□□ 0.86
SNRPF-203ENST00000551316 POLR3AO14802 1390 aaPredicted RBP20.42■□□□□ 0.86
SNRPF-203ENST00000551316 LRRC4BQ9NT99 713 aa20.41■□□□□ 0.86
SNRPF-203ENST00000551316 TRAK1Q9UPV9 953 aa20.41■□□□□ 0.86
SNRPF-203ENST00000551316 SLIT3O75094 1523 aa20.41■□□□□ 0.86
SNRPF-203ENST00000551316 KIF3CO14782 793 aa20.4■□□□□ 0.86
SNRPF-203ENST00000551316 SLC34A2O95436 690 aa20.4■□□□□ 0.86
SNRPF-203ENST00000551316 TRPM1Q7Z4N2 1603 aa20.39■□□□□ 0.86
SNRPF-203ENST00000551316 PIK3C2AO00443 1686 aa20.38■□□□□ 0.85
SNRPF-203ENST00000551316 TNS2Q63HR2 1409 aa20.38■□□□□ 0.85
SNRPF-203ENST00000551316 PNPLA7Q6ZV29 1317 aa20.38■□□□□ 0.85
SNRPF-203ENST00000551316 ZBTB7CA1YPR0 619 aa20.38■□□□□ 0.85
SNRPF-203ENST00000551316 PRELPP51888 382 aa20.37■□□□□ 0.85
SNRPF-203ENST00000551316 NUDT16Q96DE0 195 aaKnown RBP20.37■□□□□ 0.85
SNRPF-203ENST00000551316 ABCC6O95255 1503 aa20.37■□□□□ 0.85
SNRPF-203ENST00000551316 ACEP12821 1306 aa20.36■□□□□ 0.85
SNRPF-203ENST00000551316 GCP02774 474 aa20.36■□□□□ 0.85
SNRPF-203ENST00000551316 ACSBG1Q96GR2 724 aa20.36■□□□□ 0.85
SNRPF-203ENST00000551316 AKT1S1Q96B36 256 aa20.35■□□□□ 0.85
SNRPF-203ENST00000551316 TOM1L2Q6ZVM7 507 aa20.34■□□□□ 0.85
SNRPF-203ENST00000551316 ABTB2Q8N961 1025 aa20.34■□□□□ 0.85
SNRPF-203ENST00000551316 AXIN2Q9Y2T1 843 aa20.34■□□□□ 0.85
SNRPF-203ENST00000551316 GRIN3BO60391 1043 aa20.33■□□□□ 0.85
SNRPF-203ENST00000551316 HTRA3P83110 453 aa20.33■□□□□ 0.85
SNRPF-203ENST00000551316 LY75O60449 1722 aa20.33■□□□□ 0.84
SNRPF-203ENST00000551316 WDR17Q8IZU2 1322 aa20.32■□□□□ 0.84
SNRPF-203ENST00000551316 KAT6BQ8WYB5 2073 aa20.32■□□□□ 0.84
SNRPF-203ENST00000551316 POLD1P28340 1107 aa20.32■□□□□ 0.84
SNRPF-203ENST00000551316 APLP1P51693 650 aa20.32■□□□□ 0.84
SNRPF-203ENST00000551316 TNS4Q8IZW8 715 aa20.32■□□□□ 0.84
SNRPF-203ENST00000551316 PPARGC1BQ86YN6 1023 aaKnown RBP20.31■□□□□ 0.84
SNRPF-203ENST00000551316 BRD4O60885 1362 aaPredicted RBP20.31■□□□□ 0.84
SNRPF-203ENST00000551316 USP6P35125 1406 aa20.29■□□□□ 0.84
SNRPF-203ENST00000551316 CPSF1Q10570 1443 aaKnown RBP20.28■□□□□ 0.84
SNRPF-203ENST00000551316 KCNQ4P56696 695 aa20.28■□□□□ 0.84
SNRPF-203ENST00000551316 QRICH2Q9H0J4 1663 aa20.28■□□□□ 0.84
SNRPF-203ENST00000551316 CICQ96RK0 1608 aaPredicted RBP20.27■□□□□ 0.84
SNRPF-203ENST00000551316 SLC16A10Q8TF71 515 aa20.27■□□□□ 0.84
SNRPF-203ENST00000551316 DOT1LQ8TEK3 1739 aa20.27■□□□□ 0.83
SNRPF-203ENST00000551316 WWC3Q9ULE0 1092 aa20.26■□□□□ 0.83
SNRPF-203ENST00000551316 PPIP5K1Q6PFW1 1433 aa20.24■□□□□ 0.83
SNRPF-203ENST00000551316 MSL1Q68DK7 614 aa20.23■□□□□ 0.83
SNRPF-203ENST00000551316 JMYQ8N9B5 988 aa20.23■□□□□ 0.83
SNRPF-203ENST00000551316 NLRP13Q86W25 1043 aa20.22■□□□□ 0.83
SNRPF-203ENST00000551316 CDK19Q9BWU1 502 aa20.22■□□□□ 0.83
SNRPF-203ENST00000551316 USP54Q70EL1 1684 aa20.22■□□□□ 0.83
SNRPF-203ENST00000551316 PLEKHG3A1L390 1219 aa20.21■□□□□ 0.83
SNRPF-203ENST00000551316 CDCA7Q9BWT1 371 aaPredicted RBP20.21■□□□□ 0.83
SNRPF-203ENST00000551316 NFAT5O94916 1531 aa20.21■□□□□ 0.83
SNRPF-203ENST00000551316 KIAA1551Q9HCM1 1747 aa20.2■□□□□ 0.82
SNRPF-203ENST00000551316 TOGARAM1Q9Y4F4 1720 aa20.2■□□□□ 0.82
SNRPF-203ENST00000551316 KLRG1Q96E93 195 aa20.2■□□□□ 0.82
SNRPF-203ENST00000551316 CARD10Q9BWT7 1032 aa20.2■□□□□ 0.82
SNRPF-203ENST00000551316 EXOC5O00471 708 aa20.19■□□□□ 0.82
SNRPF-203ENST00000551316 C5P01031 1676 aa20.18■□□□□ 0.82
SNRPF-203ENST00000551316 TFCP2L1Q9NZI6 479 aa20.17■□□□□ 0.82
SNRPF-203ENST00000551316 MPHOSPH9Q99550 1183 aa20.16■□□□□ 0.82
SNRPF-203ENST00000551316 CCDC61Q9Y6R9 512 aa20.16■□□□□ 0.82
SNRPF-203ENST00000551316 COL23A1Q86Y22 540 aaPredicted RBP20.15■□□□□ 0.82
SNRPF-203ENST00000551316 TAF1LQ8IZX4 1826 aa20.15■□□□□ 0.82
SNRPF-203ENST00000551316 LTN1O94822 1766 aa20.14■□□□□ 0.81
SNRPF-203ENST00000551316 NMRK2Q9NPI5 230 aa20.14■□□□□ 0.81
SNRPF-203ENST00000551316 NSD2O96028 1365 aa20.13■□□□□ 0.81
SNRPF-203ENST00000551316 CCDC7Q96M83 1385 aa20.13■□□□□ 0.81
SNRPF-203ENST00000551316 TOMM70O94826 608 aa20.13■□□□□ 0.81
SNRPF-203ENST00000551316 NLRP6P59044 892 aa20.13■□□□□ 0.81
SNRPF-203ENST00000551316 PKD1L3Q7Z443 1732 aa20.13■□□□□ 0.81
SNRPF-203ENST00000551316 CSB-PGBD3P0DP91 1061 aa20.12■□□□□ 0.81
SNRPF-203ENST00000551316 ARHGEF25Q86VW2 580 aa20.12■□□□□ 0.81
SNRPF-203ENST00000551316 IGSF1Q8N6C5 1336 aa20.11■□□□□ 0.81
SNRPF-203ENST00000551316 N4BP2Q86UW6 1770 aaPredicted RBP20.11■□□□□ 0.81
SNRPF-203ENST00000551316 SOX12O15370 315 aa20.1■□□□□ 0.81
SNRPF-203ENST00000551316 SLC27A3Q5K4L6 730 aa20.1■□□□□ 0.81
SNRPF-203ENST00000551316 CD2APQ9Y5K6 639 aa20.09■□□□□ 0.81
SNRPF-203ENST00000551316 MSH5O43196 834 aa20.07■□□□□ 0.8
SNRPF-203ENST00000551316 UBR3Q6ZT12 1888 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms