RNA–Protein interactions for RNA: ENST00000551301.1

SLC48A1-208, Transcript of solute carrier family 48 member 1, humanhuman

TSL 2

Gene SLC48A1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-208ENST00000551301 WDR17Q8IZU2 1322 aa28.5■■■□□ 2.15
SLC48A1-208ENST00000551301 CLSPNQ9HAW4 1339 aa28.5■■■□□ 2.15
SLC48A1-208ENST00000551301 USP31Q70CQ4 1352 aa28.5■■■□□ 2.15
SLC48A1-208ENST00000551301 TESK2Q96S53 571 aa28.49■■■□□ 2.15
SLC48A1-208ENST00000551301 CD163L1Q9NR16 1453 aa28.48■■■□□ 2.15
SLC48A1-208ENST00000551301 TRIM37O94972 964 aa28.48■■■□□ 2.15
SLC48A1-208ENST00000551301 NME9Q86XW9 330 aa28.48■■■□□ 2.15
SLC48A1-208ENST00000551301 CDCA7Q9BWT1 371 aaPredicted RBP28.48■■■□□ 2.15
SLC48A1-208ENST00000551301 AXIN2Q9Y2T1 843 aa28.48■■■□□ 2.15
SLC48A1-208ENST00000551301 EN1Q05925 392 aaPredicted RBP28.47■■■□□ 2.15
SLC48A1-208ENST00000551301 COL18A1P39060 1754 aa28.47■■■□□ 2.15
SLC48A1-208ENST00000551301 TMF1P82094 1093 aa28.46■■■□□ 2.15
SLC48A1-208ENST00000551301 A0A1W2PP64 1363 aa28.46■■■□□ 2.15
SLC48A1-208ENST00000551301 NFAT5O94916 1531 aa28.45■■■□□ 2.15
SLC48A1-208ENST00000551301 DDB1Q16531 1140 aa28.45■■■□□ 2.14
SLC48A1-208ENST00000551301 USP47Q96K76 1375 aa28.45■■■□□ 2.14
SLC48A1-208ENST00000551301 DISP2A7MBM2 1401 aa28.44■■■□□ 2.14
SLC48A1-208ENST00000551301 ABCC6O95255 1503 aa28.44■■■□□ 2.14
SLC48A1-208ENST00000551301 PARP4Q9UKK3 1724 aaKnown RBP28.43■■■□□ 2.14
SLC48A1-208ENST00000551301 APBA3O96018 575 aa28.43■■■□□ 2.14
SLC48A1-208ENST00000551301 CDCA8Q53HL2 280 aa28.43■■■□□ 2.14
SLC48A1-208ENST00000551301 CARD10Q9BWT7 1032 aa28.43■■■□□ 2.14
SLC48A1-208ENST00000551301 USP54Q70EL1 1684 aa28.4■■■□□ 2.14
SLC48A1-208ENST00000551301 TNS1Q9HBL0 1735 aaKnown RBP28.4■■■□□ 2.14
SLC48A1-208ENST00000551301 PARD3Q8TEW0 1356 aa28.39■■■□□ 2.14
SLC48A1-208ENST00000551301 CCDC7Q96M83 1385 aa28.38■■■□□ 2.13
SLC48A1-208ENST00000551301 OVOS2A0A0G2JMS6 1433 aa28.38■■■□□ 2.13
SLC48A1-208ENST00000551301 OVOS2A0A0J9YW53 1432 aa28.38■■■□□ 2.13
SLC48A1-208ENST00000551301 OVOS2Q6IE36 1432 aa28.38■■■□□ 2.13
SLC48A1-208ENST00000551301 RGPD5Q99666 1765 aa28.38■■■□□ 2.13
SLC48A1-208ENST00000551301 COG3Q96JB2 828 aa28.37■■■□□ 2.13
SLC48A1-208ENST00000551301 EZH2Q15910 746 aaKnown RBP28.36■■■□□ 2.13
SLC48A1-208ENST00000551301 CAMKK2Q96RR4 588 aa28.34■■■□□ 2.13
SLC48A1-208ENST00000551301 NLRP2Q9NX02 1062 aa28.34■■■□□ 2.13
SLC48A1-208ENST00000551301 ANKRD36BQ8N2N9 1353 aa28.34■■■□□ 2.13
SLC48A1-208ENST00000551301 SRCAPQ6ZRS2 3230 aa28.33■■■□□ 2.13
SLC48A1-208ENST00000551301 PSDA5PKW4 1024 aaPredicted RBP28.33■■■□□ 2.13
SLC48A1-208ENST00000551301 EXOC5O00471 708 aa28.33■■■□□ 2.13
SLC48A1-208ENST00000551301 LRRC37A3O60309 1634 aa28.32■■■□□ 2.12
SLC48A1-208ENST00000551301 LTN1O94822 1766 aa28.32■■■□□ 2.12
SLC48A1-208ENST00000551301 ERBB3P21860 1342 aa28.32■■■□□ 2.12
SLC48A1-208ENST00000551301 WNK3Q9BYP7 1800 aa28.3■■■□□ 2.12
SLC48A1-208ENST00000551301 CCER1Q8TC90 406 aaPredicted RBP28.3■■■□□ 2.12
SLC48A1-208ENST00000551301 ANKRD24Q8TF21 1146 aa28.3■■■□□ 2.12
SLC48A1-208ENST00000551301 NBPF14Q5TI25 921 aa28.28■■■□□ 2.12
SLC48A1-208ENST00000551301 R3HDM1Q15032 1099 aaKnown RBP28.27■■■□□ 2.12
SLC48A1-208ENST00000551301 IP6K1Q92551 441 aa28.27■■■□□ 2.12
SLC48A1-208ENST00000551301 MARCH10Q8NA82 808 aaPredicted RBP28.26■■■□□ 2.11
SLC48A1-208ENST00000551301 AMPHP49418 695 aa28.25■■■□□ 2.11
SLC48A1-208ENST00000551301 BCL11BQ9C0K0 894 aaPredicted RBP28.25■■■□□ 2.11
SLC48A1-208ENST00000551301 PEAK1Q9H792 1746 aa28.24■■■□□ 2.11
SLC48A1-208ENST00000551301 IL2RBP14784 551 aa28.24■■■□□ 2.11
SLC48A1-208ENST00000551301 BCL9O00512 1426 aa28.23■■■□□ 2.11
SLC48A1-208ENST00000551301 TNS2Q63HR2 1409 aa28.21■■■□□ 2.11
SLC48A1-208ENST00000551301 PLSCR1O15162 318 aa28.21■■■□□ 2.11
SLC48A1-208ENST00000551301 LTV1Q96GA3 475 aaPredicted RBP28.21■■■□□ 2.11
SLC48A1-208ENST00000551301 MAP3K19Q56UN5 1328 aa28.19■■■□□ 2.1
SLC48A1-208ENST00000551301 FYB1O15117 783 aa28.19■■■□□ 2.1
SLC48A1-208ENST00000551301 GGNBP2Q9H3C7 697 aa28.19■■■□□ 2.1
SLC48A1-208ENST00000551301 SBF2Q86WG5 1849 aa28.19■■■□□ 2.1
SLC48A1-208ENST00000551301 LRP5O75197 1615 aa28.18■■■□□ 2.1
SLC48A1-208ENST00000551301 RREB1Q92766 1687 aa28.17■■■□□ 2.1
SLC48A1-208ENST00000551301 HOXC9P31274 260 aa28.17■■■□□ 2.1
SLC48A1-208ENST00000551301 FAM208AQ9UK61 1670 aaKnown RBP28.16■■■□□ 2.1
SLC48A1-208ENST00000551301 RTL1A6NKG5 1358 aa28.15■■■□□ 2.1
SLC48A1-208ENST00000551301 EIF4G2P78344 907 aaKnown RBP eCLIP28.14■■■□□ 2.1
SLC48A1-208ENST00000551301 RGPD3A6NKT7 1758 aaPredicted RBP28.14■■■□□ 2.09
SLC48A1-208ENST00000551301 RGPD4Q7Z3J3 1758 aa28.14■■■□□ 2.09
SLC48A1-208ENST00000551301 NUP188Q5SRE5 1749 aa28.13■■■□□ 2.09
SLC48A1-208ENST00000551301 SMG6Q86US8 1419 aaKnown RBP28.12■■■□□ 2.09
SLC48A1-208ENST00000551301 POLR3GLQ9BT43 218 aa28.12■■■□□ 2.09
SLC48A1-208ENST00000551301 RRS1Q15050 365 aaKnown RBP28.11■■■□□ 2.09
SLC48A1-208ENST00000551301 KIF20BQ96Q89 1820 aa28.11■■■□□ 2.09
SLC48A1-208ENST00000551301 FBLN1P23142 703 aa28.1■■■□□ 2.09
SLC48A1-208ENST00000551301 PTF1AQ7RTS3 328 aa28.09■■■□□ 2.09
SLC48A1-208ENST00000551301 NSD3Q9BZ95 1437 aa28.09■■■□□ 2.09
SLC48A1-208ENST00000551301 CARD14Q9BXL6 1004 aa28.07■■■□□ 2.08
SLC48A1-208ENST00000551301 KAT6BQ8WYB5 2073 aa28.06■■■□□ 2.08
SLC48A1-208ENST00000551301 DDX54Q8TDD1 881 aaKnown RBP28.06■■■□□ 2.08
SLC48A1-208ENST00000551301 ACSBG1Q96GR2 724 aa28.06■■■□□ 2.08
SLC48A1-208ENST00000551301 CGNL1Q0VF96 1302 aa28.06■■■□□ 2.08
SLC48A1-208ENST00000551301 KIF24Q5T7B8 1368 aa28.06■■■□□ 2.08
SLC48A1-208ENST00000551301 MYOM1P52179 1685 aa28.06■■■□□ 2.08
SLC48A1-208ENST00000551301 KCNQ2O43526 872 aa28.04■■■□□ 2.08
SLC48A1-208ENST00000551301 FLT4P35916 1363 aa28.03■■■□□ 2.08
SLC48A1-208ENST00000551301 TXNRD1Q16881 649 aa28.03■■■□□ 2.08
SLC48A1-208ENST00000551301 NHSQ6T4R5 1651 aa28.03■■■□□ 2.08
SLC48A1-208ENST00000551301 INSRP06213 1382 aa28.02■■■□□ 2.08
SLC48A1-208ENST00000551301 HSPA5P11021 654 aaKnown RBP28.02■■■□□ 2.08
SLC48A1-208ENST00000551301 RAPGEF4Q8WZA2 1011 aa28.02■■■□□ 2.08
SLC48A1-208ENST00000551301 ZCRB1Q8TBF4 217 aaKnown RBP28.01■■■□□ 2.07
SLC48A1-208ENST00000551301 STK32BQ9NY57 414 aa28.01■■■□□ 2.07
SLC48A1-208ENST00000551301 SPON1Q9HCB6 807 aa28■■■□□ 2.07
SLC48A1-208ENST00000551301 NBPF6Q5VWK0 638 aa27.99■■■□□ 2.07
SLC48A1-208ENST00000551301 PROM2Q8N271 834 aa27.99■■■□□ 2.07
SLC48A1-208ENST00000551301 NBPF4Q96M43 638 aa27.99■■■□□ 2.07
SLC48A1-208ENST00000551301 PPM1GO15355 546 aaPredicted RBP27.98■■■□□ 2.07
SLC48A1-208ENST00000551301 HSP90AB2PQ58FF8 381 aa27.98■■■□□ 2.07
SLC48A1-208ENST00000551301 TATP17735 454 aaPredicted RBP27.96■■■□□ 2.07
SLC48A1-208ENST00000551301 PPP1R1BQ9UD71 204 aaPredicted RBP27.96■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms