RNA–Protein interactions for RNA: ENST00000550173.1

SLC38A1-208, Transcript of solute carrier family 38 member 1, humanhuman

TSL 5

Gene SLC38A1, Length 891 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-208ENST00000550173 R3HDM1Q15032 1099 aaKnown RBP28.17■■■□□ 2.1
SLC38A1-208ENST00000550173 RGPD5Q99666 1765 aa28.16■■■□□ 2.1
SLC38A1-208ENST00000550173 TRIM26Q12899 539 aaPredicted RBP28.15■■■□□ 2.1
SLC38A1-208ENST00000550173 LRP5O75197 1615 aa28.14■■■□□ 2.1
SLC38A1-208ENST00000550173 PARD3Q8TEW0 1356 aa28.14■■■□□ 2.1
SLC38A1-208ENST00000550173 C11orf95C9JLR9 678 aaPredicted RBP28.14■■■□□ 2.1
SLC38A1-208ENST00000550173 CSB-PGBD3P0DP91 1061 aa28.14■■■□□ 2.1
SLC38A1-208ENST00000550173 DDB1Q16531 1140 aa28.14■■■□□ 2.1
SLC38A1-208ENST00000550173 HDGFL2Q7Z4V5 671 aaPredicted RBP28.14■■■□□ 2.1
SLC38A1-208ENST00000550173 NFAT5O94916 1531 aa28.13■■■□□ 2.09
SLC38A1-208ENST00000550173 SLC12A5Q9H2X9 1139 aa28.13■■■□□ 2.09
SLC38A1-208ENST00000550173 CD163L1Q9NR16 1453 aa28.13■■■□□ 2.09
SLC38A1-208ENST00000550173 OVOS2A0A0G2JMS6 1433 aa28.11■■■□□ 2.09
SLC38A1-208ENST00000550173 OVOS2A0A0J9YW53 1432 aa28.11■■■□□ 2.09
SLC38A1-208ENST00000550173 OVOS2Q6IE36 1432 aa28.11■■■□□ 2.09
SLC38A1-208ENST00000550173 NME9Q86XW9 330 aa28.11■■■□□ 2.09
SLC38A1-208ENST00000550173 USP31Q70CQ4 1352 aa28.11■■■□□ 2.09
SLC38A1-208ENST00000550173 LRRC37A3O60309 1634 aa28.1■■■□□ 2.09
SLC38A1-208ENST00000550173 CARD10Q9BWT7 1032 aa28.1■■■□□ 2.09
SLC38A1-208ENST00000550173 CDCA7Q9BWT1 371 aaPredicted RBP28.09■■■□□ 2.09
SLC38A1-208ENST00000550173 PUS7Q96PZ0 661 aaKnown RBP28.08■■■□□ 2.09
SLC38A1-208ENST00000550173 TERF2IPQ9NYB0 399 aa28.08■■■□□ 2.09
SLC38A1-208ENST00000550173 WNK3Q9BYP7 1800 aa28.08■■■□□ 2.09
SLC38A1-208ENST00000550173 PEAK1Q9H792 1746 aa28.07■■■□□ 2.08
SLC38A1-208ENST00000550173 RREB1Q92766 1687 aa28.07■■■□□ 2.08
SLC38A1-208ENST00000550173 ST20-MTHFSA0A0A6YYL1 179 aa28.06■■■□□ 2.08
SLC38A1-208ENST00000550173 EDC4Q6P2E9 1401 aaKnown RBP28.06■■■□□ 2.08
SLC38A1-208ENST00000550173 ABCC6O95255 1503 aa28.05■■■□□ 2.08
SLC38A1-208ENST00000550173 USP54Q70EL1 1684 aa28.05■■■□□ 2.08
SLC38A1-208ENST00000550173 A0A1W2PP64 1363 aa28.04■■■□□ 2.08
SLC38A1-208ENST00000550173 NBPF14Q5TI25 921 aa28.04■■■□□ 2.08
SLC38A1-208ENST00000550173 NUP188Q5SRE5 1749 aa28.04■■■□□ 2.08
SLC38A1-208ENST00000550173 MARCH10Q8NA82 808 aaPredicted RBP28.03■■■□□ 2.08
SLC38A1-208ENST00000550173 TESK2Q96S53 571 aa28.03■■■□□ 2.08
SLC38A1-208ENST00000550173 SBF2Q86WG5 1849 aa28.03■■■□□ 2.08
SLC38A1-208ENST00000550173 CCDC7Q96M83 1385 aa28.02■■■□□ 2.08
SLC38A1-208ENST00000550173 EXOC5O00471 708 aa28.01■■■□□ 2.07
SLC38A1-208ENST00000550173 SLC24A1O60721 1099 aa28■■■□□ 2.07
SLC38A1-208ENST00000550173 LTN1O94822 1766 aa27.99■■■□□ 2.07
SLC38A1-208ENST00000550173 BCL11BQ9C0K0 894 aaPredicted RBP27.99■■■□□ 2.07
SLC38A1-208ENST00000550173 ERBB3P21860 1342 aa27.98■■■□□ 2.07
SLC38A1-208ENST00000550173 NLRP2Q9NX02 1062 aa27.98■■■□□ 2.07
SLC38A1-208ENST00000550173 NINLQ9Y2I6 1382 aa27.98■■■□□ 2.07
SLC38A1-208ENST00000550173 PLSCR1O15162 318 aa27.97■■■□□ 2.07
SLC38A1-208ENST00000550173 PTF1AQ7RTS3 328 aa27.96■■■□□ 2.07
SLC38A1-208ENST00000550173 BCL9O00512 1426 aa27.95■■■□□ 2.07
SLC38A1-208ENST00000550173 ANKRD24Q8TF21 1146 aa27.95■■■□□ 2.06
SLC38A1-208ENST00000550173 RGPD3A6NKT7 1758 aaPredicted RBP27.93■■■□□ 2.06
SLC38A1-208ENST00000550173 RGPD4Q7Z3J3 1758 aa27.93■■■□□ 2.06
SLC38A1-208ENST00000550173 TNS2Q63HR2 1409 aa27.92■■■□□ 2.06
SLC38A1-208ENST00000550173 IL2RBP14784 551 aa27.9■■■□□ 2.06
SLC38A1-208ENST00000550173 COG3Q96JB2 828 aa27.9■■■□□ 2.06
SLC38A1-208ENST00000550173 USP47Q96K76 1375 aa27.89■■■□□ 2.06
SLC38A1-208ENST00000550173 TMF1P82094 1093 aa27.89■■■□□ 2.06
SLC38A1-208ENST00000550173 IP6K1Q92551 441 aa27.88■■■□□ 2.05
SLC38A1-208ENST00000550173 ANKRD36BQ8N2N9 1353 aa27.86■■■□□ 2.05
SLC38A1-208ENST00000550173 LTV1Q96GA3 475 aaPredicted RBP27.85■■■□□ 2.05
SLC38A1-208ENST00000550173 KCNQ2O43526 872 aa27.84■■■□□ 2.05
SLC38A1-208ENST00000550173 PROM2Q8N271 834 aa27.84■■■□□ 2.05
SLC38A1-208ENST00000550173 ANO8Q9HCE9 1232 aaPredicted RBP27.84■■■□□ 2.05
SLC38A1-208ENST00000550173 ACSBG1Q96GR2 724 aa27.83■■■□□ 2.05
SLC38A1-208ENST00000550173 FBLN1P23142 703 aa27.82■■■□□ 2.04
SLC38A1-208ENST00000550173 AMPHP49418 695 aa27.82■■■□□ 2.04
SLC38A1-208ENST00000550173 SPON1Q9HCB6 807 aa27.82■■■□□ 2.04
SLC38A1-208ENST00000550173 MAP3K19Q56UN5 1328 aa27.82■■■□□ 2.04
SLC38A1-208ENST00000550173 TXNRD1Q16881 649 aa27.81■■■□□ 2.04
SLC38A1-208ENST00000550173 KAT6BQ8WYB5 2073 aa27.8■■■□□ 2.04
SLC38A1-208ENST00000550173 NHSQ6T4R5 1651 aa27.79■■■□□ 2.04
SLC38A1-208ENST00000550173 FAM208AQ9UK61 1670 aaKnown RBP27.79■■■□□ 2.04
SLC38A1-208ENST00000550173 HOXC9P31274 260 aa27.79■■■□□ 2.04
SLC38A1-208ENST00000550173 CDCA8Q53HL2 280 aa27.79■■■□□ 2.04
SLC38A1-208ENST00000550173 FYB1O15117 783 aa27.77■■■□□ 2.04
SLC38A1-208ENST00000550173 GGNBP2Q9H3C7 697 aa27.77■■■□□ 2.04
SLC38A1-208ENST00000550173 PPP1R1BQ9UD71 204 aaPredicted RBP27.77■■■□□ 2.04
SLC38A1-208ENST00000550173 PCGF6Q9BYE7 350 aa27.76■■■□□ 2.03
SLC38A1-208ENST00000550173 STK32BQ9NY57 414 aa27.76■■■□□ 2.03
SLC38A1-208ENST00000550173 TIMELESSQ9UNS1 1208 aa27.76■■■□□ 2.03
SLC38A1-208ENST00000550173 RRS1Q15050 365 aaKnown RBP27.74■■■□□ 2.03
SLC38A1-208ENST00000550173 DDX54Q8TDD1 881 aaKnown RBP27.74■■■□□ 2.03
SLC38A1-208ENST00000550173 RTL1A6NKG5 1358 aa27.72■■■□□ 2.03
SLC38A1-208ENST00000550173 CASZ1Q86V15 1759 aa27.71■■■□□ 2.03
SLC38A1-208ENST00000550173 SLC15A2Q16348 729 aa27.71■■■□□ 2.03
SLC38A1-208ENST00000550173 PDGFDQ9GZP0 370 aaPredicted RBP27.71■■■□□ 2.03
SLC38A1-208ENST00000550173 BTAF1O14981 1849 aa27.71■■■□□ 2.03
SLC38A1-208ENST00000550173 RGPD2P0DJD1 1756 aa27.71■■■□□ 2.03
SLC38A1-208ENST00000550173 CLSPNQ9HAW4 1339 aa27.7■■■□□ 2.03
SLC38A1-208ENST00000550173 ZBTB7AO95365 584 aa27.68■■■□□ 2.02
SLC38A1-208ENST00000550173 KIF20BQ96Q89 1820 aa27.68■■■□□ 2.02
SLC38A1-208ENST00000550173 NBPF6Q5VWK0 638 aa27.65■■■□□ 2.02
SLC38A1-208ENST00000550173 ZCRB1Q8TBF4 217 aaKnown RBP27.65■■■□□ 2.02
SLC38A1-208ENST00000550173 NBPF4Q96M43 638 aa27.65■■■□□ 2.02
SLC38A1-208ENST00000550173 MYOM1P52179 1685 aa27.65■■■□□ 2.02
SLC38A1-208ENST00000550173 CARD14Q9BXL6 1004 aa27.64■■■□□ 2.02
SLC38A1-208ENST00000550173 SMG6Q86US8 1419 aaKnown RBP27.64■■■□□ 2.02
SLC38A1-208ENST00000550173 MEGF6O75095 1541 aa27.63■■■□□ 2.01
SLC38A1-208ENST00000550173 USHBP1Q8N6Y0 703 aa27.63■■■□□ 2.01
SLC38A1-208ENST00000550173 ATF5Q9Y2D1 282 aaPredicted RBP27.63■■■□□ 2.01
SLC38A1-208ENST00000550173 NSD3Q9BZ95 1437 aa27.62■■■□□ 2.01
SLC38A1-208ENST00000550173 SYTL4Q96C24 671 aaPredicted RBP27.62■■■□□ 2.01
SLC38A1-208ENST00000550173 HSP90AB2PQ58FF8 381 aa27.61■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms