RNA–Protein interactions for RNA: ENST00000548709.1

ERBB3-206, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 2

Gene ERBB3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-206ENST00000548709 C1QTNF8P60827 252 aa10.53□□□□□ -0.72
ERBB3-206ENST00000548709 SLC16A10Q8TF71 515 aa10.53□□□□□ -0.72
ERBB3-206ENST00000548709 EVC2Q86UK5 1308 aa10.53□□□□□ -0.72
ERBB3-206ENST00000548709 HMGB2P26583 209 aaKnown RBP10.52□□□□□ -0.73
ERBB3-206ENST00000548709 ARXQ96QS3 562 aa10.52□□□□□ -0.73
ERBB3-206ENST00000548709 AXIN2Q9Y2T1 843 aa10.52□□□□□ -0.73
ERBB3-206ENST00000548709 TNS1Q9HBL0 1735 aaKnown RBP10.52□□□□□ -0.73
ERBB3-206ENST00000548709 CCDC7Q96M83 1385 aa10.52□□□□□ -0.73
ERBB3-206ENST00000548709 SENP3-EIF4A1A0A087X0R7 540 aa10.51□□□□□ -0.73
ERBB3-206ENST00000548709 NBPF1Q3BBV0 1214 aa10.51□□□□□ -0.73
ERBB3-206ENST00000548709 TTC21AQ8NDW8 1320 aa10.51□□□□□ -0.73
ERBB3-206ENST00000548709 GPR162Q16538 588 aa10.5□□□□□ -0.73
ERBB3-206ENST00000548709 SGIP1Q9BQI5 828 aa10.5□□□□□ -0.73
ERBB3-206ENST00000548709 PDGFDQ9GZP0 370 aaPredicted RBP10.5□□□□□ -0.73
ERBB3-206ENST00000548709 MAP3K5Q99683 1374 aa10.5□□□□□ -0.73
ERBB3-206ENST00000548709 USP6P35125 1406 aa10.5□□□□□ -0.73
ERBB3-206ENST00000548709 POLD1P28340 1107 aa10.49□□□□□ -0.73
ERBB3-206ENST00000548709 PTF1AQ7RTS3 328 aa10.49□□□□□ -0.73
ERBB3-206ENST00000548709 TTC21BQ7Z4L5 1316 aa10.49□□□□□ -0.73
ERBB3-206ENST00000548709 SLC27A3Q5K4L6 730 aa10.48□□□□□ -0.73
ERBB3-206ENST00000548709 GRIN3BO60391 1043 aa10.47□□□□□ -0.73
ERBB3-206ENST00000548709 IL2RBP14784 551 aa10.47□□□□□ -0.73
ERBB3-206ENST00000548709 RREB1Q92766 1687 aa10.47□□□□□ -0.73
ERBB3-206ENST00000548709 CRYBG1Q9Y4K1 1723 aa10.47□□□□□ -0.73
ERBB3-206ENST00000548709 GIGYF1O75420 1035 aaPredicted RBP10.46□□□□□ -0.73
ERBB3-206ENST00000548709 IFFO2Q5TF58 517 aa10.46□□□□□ -0.73
ERBB3-206ENST00000548709 NLRP2Q9NX02 1062 aa10.46□□□□□ -0.73
ERBB3-206ENST00000548709 CPSF1Q10570 1443 aaKnown RBP10.46□□□□□ -0.74
ERBB3-206ENST00000548709 NRKQ7Z2Y5 1582 aa10.46□□□□□ -0.74
ERBB3-206ENST00000548709 LMO7Q8WWI1 1683 aa10.46□□□□□ -0.74
ERBB3-206ENST00000548709 ITSN1Q15811 1721 aa10.46□□□□□ -0.74
ERBB3-206ENST00000548709 NUP188Q5SRE5 1749 aa10.44□□□□□ -0.74
ERBB3-206ENST00000548709 PHRF1Q9P1Y6 1649 aaKnown RBP10.44□□□□□ -0.74
ERBB3-206ENST00000548709 SOX12O15370 315 aa10.44□□□□□ -0.74
ERBB3-206ENST00000548709 ACSBG1Q96GR2 724 aa10.44□□□□□ -0.74
ERBB3-206ENST00000548709 PARP4Q9UKK3 1724 aaKnown RBP10.44□□□□□ -0.74
ERBB3-206ENST00000548709 SLIT3O75094 1523 aa10.43□□□□□ -0.74
ERBB3-206ENST00000548709 TFCP2L1Q9NZI6 479 aa10.43□□□□□ -0.74
ERBB3-206ENST00000548709 ERBB3P21860 1342 aa10.42□□□□□ -0.74
ERBB3-206ENST00000548709 AKT1S1Q96B36 256 aa10.42□□□□□ -0.74
ERBB3-206ENST00000548709 TNS2Q63HR2 1409 aa10.41□□□□□ -0.74
ERBB3-206ENST00000548709 KTN1Q86UP2 1357 aaKnown RBP10.41□□□□□ -0.74
ERBB3-206ENST00000548709 HDGFL2Q7Z4V5 671 aaPredicted RBP10.41□□□□□ -0.74
ERBB3-206ENST00000548709 LRRC4BQ9NT99 713 aa10.41□□□□□ -0.74
ERBB3-206ENST00000548709 RGPD3A6NKT7 1758 aaPredicted RBP10.41□□□□□ -0.74
ERBB3-206ENST00000548709 RGPD4Q7Z3J3 1758 aa10.41□□□□□ -0.74
ERBB3-206ENST00000548709 USP31Q70CQ4 1352 aa10.4□□□□□ -0.74
ERBB3-206ENST00000548709 SLC24A1O60721 1099 aa10.4□□□□□ -0.74
ERBB3-206ENST00000548709 PELP1Q8IZL8 1130 aaKnown RBP10.4□□□□□ -0.74
ERBB3-206ENST00000548709 KLHL34Q8N239 644 aa10.4□□□□□ -0.74
ERBB3-206ENST00000548709 ANKRD24Q8TF21 1146 aa10.4□□□□□ -0.74
ERBB3-206ENST00000548709 L3MBTL2Q969R5 705 aa10.4□□□□□ -0.74
ERBB3-206ENST00000548709 PEAK1Q9H792 1746 aa10.4□□□□□ -0.74
ERBB3-206ENST00000548709 ARHGEF28Q8N1W1 1705 aaKnown RBP10.39□□□□□ -0.75
ERBB3-206ENST00000548709 ZNF827Q17R98 1081 aa10.39□□□□□ -0.75
ERBB3-206ENST00000548709 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.39□□□□□ -0.75
ERBB3-206ENST00000548709 FLAD1Q8NFF5 587 aa10.39□□□□□ -0.75
ERBB3-206ENST00000548709 DDX54Q8TDD1 881 aaKnown RBP10.39□□□□□ -0.75
ERBB3-206ENST00000548709 PUS7Q96PZ0 661 aaKnown RBP10.39□□□□□ -0.75
ERBB3-206ENST00000548709 TERF2IPQ9NYB0 399 aa10.39□□□□□ -0.75
ERBB3-206ENST00000548709 ABCC6O95255 1503 aa10.38□□□□□ -0.75
ERBB3-206ENST00000548709 TOPAZ1Q8N9V7 1692 aa10.38□□□□□ -0.75
ERBB3-206ENST00000548709 IP6K1Q92551 441 aa10.38□□□□□ -0.75
ERBB3-206ENST00000548709 PRIM1P49642 420 aaKnown RBP10.37□□□□□ -0.75
ERBB3-206ENST00000548709 SYTL4Q96C24 671 aaPredicted RBP10.37□□□□□ -0.75
ERBB3-206ENST00000548709 CD2APQ9Y5K6 639 aa10.37□□□□□ -0.75
ERBB3-206ENST00000548709 ROCK2O75116 1388 aaKnown RBP10.37□□□□□ -0.75
ERBB3-206ENST00000548709 CASZ1Q86V15 1759 aa10.37□□□□□ -0.75
ERBB3-206ENST00000548709 LRRC37A3O60309 1634 aa10.36□□□□□ -0.75
ERBB3-206ENST00000548709 PNPLA7Q6ZV29 1317 aa10.36□□□□□ -0.75
ERBB3-206ENST00000548709 KIAA1210Q9ULL0 1709 aa10.36□□□□□ -0.75
ERBB3-206ENST00000548709 MSH5O43196 834 aa10.36□□□□□ -0.75
ERBB3-206ENST00000548709 ZCRB1Q8TBF4 217 aaKnown RBP10.36□□□□□ -0.75
ERBB3-206ENST00000548709 TMC1Q8TDI8 760 aa10.36□□□□□ -0.75
ERBB3-206ENST00000548709 CGNL1Q0VF96 1302 aa10.35□□□□□ -0.75
ERBB3-206ENST00000548709 UTRNP46939 3433 aa10.35□□□□□ -0.75
ERBB3-206ENST00000548709 NME9Q86XW9 330 aa10.35□□□□□ -0.75
ERBB3-206ENST00000548709 GPBP1L1Q9HC44 474 aaPredicted RBP10.35□□□□□ -0.75
ERBB3-206ENST00000548709 CCNL1Q9UK58 526 aaPredicted RBP10.35□□□□□ -0.75
ERBB3-206ENST00000548709 SBNO2Q9Y2G9 1366 aa10.35□□□□□ -0.75
ERBB3-206ENST00000548709 ANKRD36BQ8N2N9 1353 aa10.34□□□□□ -0.75
ERBB3-206ENST00000548709 AMPHP49418 695 aa10.33□□□□□ -0.76
ERBB3-206ENST00000548709 NLGN2Q8NFZ4 835 aa10.33□□□□□ -0.76
ERBB3-206ENST00000548709 COG3Q96JB2 828 aa10.33□□□□□ -0.76
ERBB3-206ENST00000548709 SLC12A5Q9H2X9 1139 aa10.33□□□□□ -0.76
ERBB3-206ENST00000548709 USP47Q96K76 1375 aa10.33□□□□□ -0.76
ERBB3-206ENST00000548709 TRPM1Q7Z4N2 1603 aa10.33□□□□□ -0.76
ERBB3-206ENST00000548709 COL18A1P39060 1754 aa10.32□□□□□ -0.76
ERBB3-206ENST00000548709 MYOM1P52179 1685 aa10.32□□□□□ -0.76
ERBB3-206ENST00000548709 YBX3P16989 372 aaKnown RBP eCLIP10.32□□□□□ -0.76
ERBB3-206ENST00000548709 HSPA6P17066 643 aa10.32□□□□□ -0.76
ERBB3-206ENST00000548709 COL23A1Q86Y22 540 aaPredicted RBP10.32□□□□□ -0.76
ERBB3-206ENST00000548709 NFAT5O94916 1531 aa10.32□□□□□ -0.76
ERBB3-206ENST00000548709 EDC4Q6P2E9 1401 aaKnown RBP10.32□□□□□ -0.76
ERBB3-206ENST00000548709 RAPGEF4Q8WZA2 1011 aa10.31□□□□□ -0.76
ERBB3-206ENST00000548709 SMARCC1Q92922 1105 aaPredicted RBP10.31□□□□□ -0.76
ERBB3-206ENST00000548709 LTV1Q96GA3 475 aaPredicted RBP10.31□□□□□ -0.76
ERBB3-206ENST00000548709 CARD11Q9BXL7 1154 aa10.31□□□□□ -0.76
ERBB3-206ENST00000548709 SBF2Q86WG5 1849 aa10.3□□□□□ -0.76
ERBB3-206ENST00000548709 PIK3C2AO00443 1686 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 113.4 ms