RNA–Protein interactions for RNA: ENST00000547259.1

HDAC7-226, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-226ENST00000547259 TESK2Q96S53 571 aa16.79■□□□□ 0.28
HDAC7-226ENST00000547259 OVOS2A0A0G2JMS6 1433 aa16.79■□□□□ 0.28
HDAC7-226ENST00000547259 OVOS2A0A0J9YW53 1432 aa16.79■□□□□ 0.28
HDAC7-226ENST00000547259 OVOS2Q6IE36 1432 aa16.79■□□□□ 0.28
HDAC7-226ENST00000547259 TMF1P82094 1093 aa16.78■□□□□ 0.28
HDAC7-226ENST00000547259 DDB1Q16531 1140 aa16.78■□□□□ 0.28
HDAC7-226ENST00000547259 TOM1L2Q6ZVM7 507 aa16.78■□□□□ 0.28
HDAC7-226ENST00000547259 ZBTB7CA1YPR0 619 aa16.77■□□□□ 0.28
HDAC7-226ENST00000547259 DCAF8L1A6NGE4 600 aa16.77■□□□□ 0.28
HDAC7-226ENST00000547259 PLSCR1O15162 318 aa16.77■□□□□ 0.28
HDAC7-226ENST00000547259 SLC24A1O60721 1099 aa16.77■□□□□ 0.28
HDAC7-226ENST00000547259 SLIT3O75094 1523 aa16.76■□□□□ 0.27
HDAC7-226ENST00000547259 NUP188Q5SRE5 1749 aa16.76■□□□□ 0.27
HDAC7-226ENST00000547259 WDR17Q8IZU2 1322 aa16.75■□□□□ 0.27
HDAC7-226ENST00000547259 TTC21AQ8NDW8 1320 aa16.75■□□□□ 0.27
HDAC7-226ENST00000547259 RGPD3A6NKT7 1758 aaPredicted RBP16.75■□□□□ 0.27
HDAC7-226ENST00000547259 RGPD4Q7Z3J3 1758 aa16.75■□□□□ 0.27
HDAC7-226ENST00000547259 SPON1Q9HCB6 807 aa16.75■□□□□ 0.27
HDAC7-226ENST00000547259 BCL11BQ9C0K0 894 aaPredicted RBP16.74■□□□□ 0.27
HDAC7-226ENST00000547259 SBF2Q86WG5 1849 aa16.74■□□□□ 0.27
HDAC7-226ENST00000547259 MYOM1P52179 1685 aa16.74■□□□□ 0.27
HDAC7-226ENST00000547259 PPP1R1BQ9UD71 204 aaPredicted RBP16.73■□□□□ 0.27
HDAC7-226ENST00000547259 TTC21BQ7Z4L5 1316 aa16.72■□□□□ 0.27
HDAC7-226ENST00000547259 KCNQ2O43526 872 aa16.72■□□□□ 0.27
HDAC7-226ENST00000547259 CDCA8Q53HL2 280 aa16.72■□□□□ 0.27
HDAC7-226ENST00000547259 ARHGEF25Q86VW2 580 aa16.72■□□□□ 0.27
HDAC7-226ENST00000547259 CARD10Q9BWT7 1032 aa16.72■□□□□ 0.27
HDAC7-226ENST00000547259 PIK3C2AO00443 1686 aa16.72■□□□□ 0.27
HDAC7-226ENST00000547259 COL18A1P39060 1754 aa16.72■□□□□ 0.27
HDAC7-226ENST00000547259 BCL9O00512 1426 aa16.71■□□□□ 0.27
HDAC7-226ENST00000547259 ZNF316A6NFI3 1004 aaPredicted RBP16.71■□□□□ 0.27
HDAC7-226ENST00000547259 CSB-PGBD3P0DP91 1061 aa16.71■□□□□ 0.27
HDAC7-226ENST00000547259 POLR3GLQ9BT43 218 aa16.71■□□□□ 0.27
HDAC7-226ENST00000547259 AKAP12Q02952 1782 aa16.71■□□□□ 0.27
HDAC7-226ENST00000547259 CPSF1Q10570 1443 aaKnown RBP16.7■□□□□ 0.26
HDAC7-226ENST00000547259 PEAK1Q9H792 1746 aa16.7■□□□□ 0.26
HDAC7-226ENST00000547259 EXOC5O00471 708 aa16.7■□□□□ 0.26
HDAC7-226ENST00000547259 KIF7Q2M1P5 1343 aa16.7■□□□□ 0.26
HDAC7-226ENST00000547259 CCDC7Q96M83 1385 aa16.69■□□□□ 0.26
HDAC7-226ENST00000547259 LRRC37A3O60309 1634 aa16.69■□□□□ 0.26
HDAC7-226ENST00000547259 ABCC6O95255 1503 aa16.69■□□□□ 0.26
HDAC7-226ENST00000547259 WNK3Q9BYP7 1800 aa16.68■□□□□ 0.26
HDAC7-226ENST00000547259 KTN1Q86UP2 1357 aaKnown RBP16.68■□□□□ 0.26
HDAC7-226ENST00000547259 NINLQ9Y2I6 1382 aa16.68■□□□□ 0.26
HDAC7-226ENST00000547259 AXIN2Q9Y2T1 843 aa16.68■□□□□ 0.26
HDAC7-226ENST00000547259 RGPD5Q99666 1765 aa16.67■□□□□ 0.26
HDAC7-226ENST00000547259 WASHC2AQ641Q2 1341 aa16.67■□□□□ 0.26
HDAC7-226ENST00000547259 KAT6BQ8WYB5 2073 aa16.66■□□□□ 0.26
HDAC7-226ENST00000547259 MARCH10Q8NA82 808 aaPredicted RBP16.66■□□□□ 0.26
HDAC7-226ENST00000547259 PUS7Q96PZ0 661 aaKnown RBP16.66■□□□□ 0.26
HDAC7-226ENST00000547259 SOX12O15370 315 aa16.64■□□□□ 0.25
HDAC7-226ENST00000547259 HDGFL2Q7Z4V5 671 aaPredicted RBP16.64■□□□□ 0.25
HDAC7-226ENST00000547259 MON2Q7Z3U7 1717 aa16.63■□□□□ 0.25
HDAC7-226ENST00000547259 YY1P25490 414 aa16.63■□□□□ 0.25
HDAC7-226ENST00000547259 TMC1Q8TDI8 760 aa16.63■□□□□ 0.25
HDAC7-226ENST00000547259 STK32BQ9NY57 414 aa16.63■□□□□ 0.25
HDAC7-226ENST00000547259 USP31Q70CQ4 1352 aa16.63■□□□□ 0.25
HDAC7-226ENST00000547259 NFAT5O94916 1531 aa16.61■□□□□ 0.25
HDAC7-226ENST00000547259 TERF2IPQ9NYB0 399 aa16.61■□□□□ 0.25
HDAC7-226ENST00000547259 TXNRD1Q16881 649 aa16.6■□□□□ 0.25
HDAC7-226ENST00000547259 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.6■□□□□ 0.25
HDAC7-226ENST00000547259 TNS2Q63HR2 1409 aa16.6■□□□□ 0.25
HDAC7-226ENST00000547259 USP54Q70EL1 1684 aa16.59■□□□□ 0.25
HDAC7-226ENST00000547259 PROM2Q8N271 834 aa16.59■□□□□ 0.25
HDAC7-226ENST00000547259 NLRP2Q9NX02 1062 aa16.59■□□□□ 0.25
HDAC7-226ENST00000547259 IL2RBP14784 551 aa16.58■□□□□ 0.24
HDAC7-226ENST00000547259 SLC15A2Q16348 729 aa16.58■□□□□ 0.24
HDAC7-226ENST00000547259 SLC12A5Q9H2X9 1139 aa16.58■□□□□ 0.24
HDAC7-226ENST00000547259 ANO8Q9HCE9 1232 aaPredicted RBP16.58■□□□□ 0.24
HDAC7-226ENST00000547259 ERBB3P21860 1342 aa16.58■□□□□ 0.24
HDAC7-226ENST00000547259 CD163L1Q9NR16 1453 aa16.58■□□□□ 0.24
HDAC7-226ENST00000547259 LTN1O94822 1766 aa16.57■□□□□ 0.24
HDAC7-226ENST00000547259 CASZ1Q86V15 1759 aa16.57■□□□□ 0.24
HDAC7-226ENST00000547259 EDC4Q6P2E9 1401 aaKnown RBP16.57■□□□□ 0.24
HDAC7-226ENST00000547259 ANKRD36BQ8N2N9 1353 aa16.57■□□□□ 0.24
HDAC7-226ENST00000547259 KIF20BQ96Q89 1820 aa16.56■□□□□ 0.24
HDAC7-226ENST00000547259 A0A1W2PP64 1363 aa16.56■□□□□ 0.24
HDAC7-226ENST00000547259 PTF1AQ7RTS3 328 aa16.56■□□□□ 0.24
HDAC7-226ENST00000547259 MTFR1LQ9H019 292 aa16.55■□□□□ 0.24
HDAC7-226ENST00000547259 NHSQ6T4R5 1651 aa16.55■□□□□ 0.24
HDAC7-226ENST00000547259 ZBTB7AO95365 584 aa16.54■□□□□ 0.24
HDAC7-226ENST00000547259 NME9Q86XW9 330 aa16.54■□□□□ 0.24
HDAC7-226ENST00000547259 ANKRD24Q8TF21 1146 aa16.54■□□□□ 0.24
HDAC7-226ENST00000547259 DDX10Q13206 875 aaKnown RBP16.53■□□□□ 0.24
HDAC7-226ENST00000547259 PANK3Q9H999 370 aa16.52■□□□□ 0.24
HDAC7-226ENST00000547259 FAM208AQ9UK61 1670 aaKnown RBP16.52■□□□□ 0.23
HDAC7-226ENST00000547259 NSD3Q9BZ95 1437 aa16.52■□□□□ 0.23
HDAC7-226ENST00000547259 ANKRD26Q9UPS8 1709 aa16.51■□□□□ 0.23
HDAC7-226ENST00000547259 HMGB2P26583 209 aaKnown RBP16.51■□□□□ 0.23
HDAC7-226ENST00000547259 PTGER2P43116 358 aa16.51■□□□□ 0.23
HDAC7-226ENST00000547259 IP6K1Q92551 441 aa16.51■□□□□ 0.23
HDAC7-226ENST00000547259 ATF5Q9Y2D1 282 aaPredicted RBP16.51■□□□□ 0.23
HDAC7-226ENST00000547259 SLC27A3Q5K4L6 730 aa16.5■□□□□ 0.23
HDAC7-226ENST00000547259 ACSBG1Q96GR2 724 aa16.5■□□□□ 0.23
HDAC7-226ENST00000547259 SLC16A10Q8TF71 515 aa16.49■□□□□ 0.23
HDAC7-226ENST00000547259 COG3Q96JB2 828 aa16.49■□□□□ 0.23
HDAC7-226ENST00000547259 SYT17Q9BSW7 474 aa16.49■□□□□ 0.23
HDAC7-226ENST00000547259 PDGFDQ9GZP0 370 aaPredicted RBP16.49■□□□□ 0.23
HDAC7-226ENST00000547259 BTAF1O14981 1849 aa16.49■□□□□ 0.23
HDAC7-226ENST00000547259 CHD4Q14839 1912 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms