RNA–Protein interactions for RNA: ENST00000545894.1

DDB1-224, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 2,282 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-224ENST00000545894 WDR63Q8IWG1 891 aa14.63□□□□□ -0.07
DDB1-224ENST00000545894 PHF23Q9BUL5 403 aaPredicted RBP14.63□□□□□ -0.07
DDB1-224ENST00000545894 CPSF1Q10570 1443 aaKnown RBP14.62□□□□□ -0.07
DDB1-224ENST00000545894 NEUROD2Q15784 382 aa14.62□□□□□ -0.07
DDB1-224ENST00000545894 TCP11L2Q8N4U5 519 aa14.62□□□□□ -0.07
DDB1-224ENST00000545894 ITSN1Q15811 1721 aa14.62□□□□□ -0.07
DDB1-224ENST00000545894 RRP7AQ9Y3A4 280 aaKnown RBP14.62□□□□□ -0.07
DDB1-224ENST00000545894 A0A1W2PP64 1363 aa14.61□□□□□ -0.07
DDB1-224ENST00000545894 HDGFL2Q7Z4V5 671 aaPredicted RBP14.61□□□□□ -0.07
DDB1-224ENST00000545894 UPF2Q9HAU5 1272 aaKnown RBP14.61□□□□□ -0.07
DDB1-224ENST00000545894 TERF2IPQ9NYB0 399 aa14.61□□□□□ -0.07
DDB1-224ENST00000545894 ANKRD36BQ8N2N9 1353 aa14.61□□□□□ -0.07
DDB1-224ENST00000545894 XPCQ01831 940 aaPredicted RBP14.61□□□□□ -0.07
DDB1-224ENST00000545894 PCDHB15Q9Y5E8 787 aa14.61□□□□□ -0.07
DDB1-224ENST00000545894 ROBO1Q9Y6N7 1651 aa14.6□□□□□ -0.07
DDB1-224ENST00000545894 TNNT2P45379 298 aaPredicted RBP14.6□□□□□ -0.07
DDB1-224ENST00000545894 PSME1Q06323 249 aa14.6□□□□□ -0.07
DDB1-224ENST00000545894 CCDC27Q2M243 656 aa14.6□□□□□ -0.07
DDB1-224ENST00000545894 RLBP1P12271 317 aa14.59□□□□□ -0.07
DDB1-224ENST00000545894 ZNF692Q9BU19 519 aaPredicted RBP14.59□□□□□ -0.07
DDB1-224ENST00000545894 KIF1AQ12756 1690 aa14.59□□□□□ -0.07
DDB1-224ENST00000545894 KRT28Q7Z3Y7 464 aa14.59□□□□□ -0.07
DDB1-224ENST00000545894 PDZRN3Q9UPQ7 1066 aa14.59□□□□□ -0.07
DDB1-224ENST00000545894 CFAP53Q96M91 514 aa14.58□□□□□ -0.08
DDB1-224ENST00000545894 TBC1D32Q96NH3 1257 aa14.58□□□□□ -0.08
DDB1-224ENST00000545894 RWDD1Q9H446 243 aaPredicted RBP14.58□□□□□ -0.08
DDB1-224ENST00000545894 NCBP3Q53F19 620 aaKnown RBP14.58□□□□□ -0.08
DDB1-224ENST00000545894 NPHP3Q7Z494 1330 aa14.58□□□□□ -0.08
DDB1-224ENST00000545894 SLKQ9H2G2 1235 aaPredicted RBP14.58□□□□□ -0.08
DDB1-224ENST00000545894 USP6P35125 1406 aa14.57□□□□□ -0.08
DDB1-224ENST00000545894 MYH16Q9H6N6 1097 aa14.57□□□□□ -0.08
DDB1-224ENST00000545894 TNNQ9UQP3 1299 aa14.57□□□□□ -0.08
DDB1-224ENST00000545894 MTHFSP49914 203 aa14.57□□□□□ -0.08
DDB1-224ENST00000545894 BCL2L13Q9BXK5 485 aa14.57□□□□□ -0.08
DDB1-224ENST00000545894 ANTXR1Q9H6X2 564 aa14.57□□□□□ -0.08
DDB1-224ENST00000545894 SSH2Q76I76 1423 aa14.56□□□□□ -0.08
DDB1-224ENST00000545894 SOS2Q07890 1332 aaPredicted RBP14.56□□□□□ -0.08
DDB1-224ENST00000545894 PXDNQ92626 1479 aa14.56□□□□□ -0.08
DDB1-224ENST00000545894 AKAP12Q02952 1782 aa14.55□□□□□ -0.08
DDB1-224ENST00000545894 TTC21BQ7Z4L5 1316 aa14.55□□□□□ -0.08
DDB1-224ENST00000545894 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.55□□□□□ -0.08
DDB1-224ENST00000545894 FAM43AQ8N2R8 423 aa14.55□□□□□ -0.08
DDB1-224ENST00000545894 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.55□□□□□ -0.08
DDB1-224ENST00000545894 MVPQ14764 893 aaKnown RBP14.54□□□□□ -0.08
DDB1-224ENST00000545894 EDC4Q6P2E9 1401 aaKnown RBP14.54□□□□□ -0.08
DDB1-224ENST00000545894 NHSL1Q5SYE7 1610 aa14.54□□□□□ -0.08
DDB1-224ENST00000545894 TBC1D2Q9BYX2 928 aa14.54□□□□□ -0.08
DDB1-224ENST00000545894 AHDC1Q5TGY3 1603 aaPredicted RBP14.54□□□□□ -0.08
DDB1-224ENST00000545894 MON2Q7Z3U7 1717 aa14.53□□□□□ -0.08
DDB1-224ENST00000545894 ZKSCAN2Q63HK3 967 aa14.53□□□□□ -0.08
DDB1-224ENST00000545894 SBNO1A3KN83 1393 aa14.53□□□□□ -0.08
DDB1-224ENST00000545894 NSD2O96028 1365 aa14.52□□□□□ -0.09
DDB1-224ENST00000545894 CT47B1P0C2W7 299 aaPredicted RBP14.52□□□□□ -0.09
DDB1-224ENST00000545894 NME9Q86XW9 330 aa14.52□□□□□ -0.09
DDB1-224ENST00000545894 ZRANB1Q9UGI0 708 aa14.52□□□□□ -0.09
DDB1-224ENST00000545894 NRKQ7Z2Y5 1582 aa14.51□□□□□ -0.09
DDB1-224ENST00000545894 SPATA31A3Q5VYP0 1347 aa14.51□□□□□ -0.09
DDB1-224ENST00000545894 TRPM3Q9HCF6 1732 aaPredicted RBP14.51□□□□□ -0.09
DDB1-224ENST00000545894 U2AF1L5P0DN76 240 aaPredicted RBP14.51□□□□□ -0.09
DDB1-224ENST00000545894 U2AF1Q01081 240 aaKnown RBP eCLIP14.51□□□□□ -0.09
DDB1-224ENST00000545894 L1TD1Q5T7N2 865 aaKnown RBP14.51□□□□□ -0.09
DDB1-224ENST00000545894 FTSJ3Q8IY81 847 aaKnown RBP14.51□□□□□ -0.09
DDB1-224ENST00000545894 TTC21AQ8NDW8 1320 aa14.51□□□□□ -0.09
DDB1-224ENST00000545894 FYB1O15117 783 aa14.5□□□□□ -0.09
DDB1-224ENST00000545894 PRKCSHP14314 528 aaPredicted RBP14.5□□□□□ -0.09
DDB1-224ENST00000545894 HSPA1LP34931 641 aa14.5□□□□□ -0.09
DDB1-224ENST00000545894 DZIP1LQ8IYY4 767 aaKnown RBP14.5□□□□□ -0.09
DDB1-224ENST00000545894 FBXO41Q8TF61 875 aa14.5□□□□□ -0.09
DDB1-224ENST00000545894 NUTM2GQ5VZR2 741 aa14.5□□□□□ -0.09
DDB1-224ENST00000545894 LMOD2Q6P5Q4 547 aa14.5□□□□□ -0.09
DDB1-224ENST00000545894 ABTB2Q8N961 1025 aa14.5□□□□□ -0.09
DDB1-224ENST00000545894 PHLPP1O60346 1717 aa14.49□□□□□ -0.09
DDB1-224ENST00000545894 LRRC59Q96AG4 307 aaKnown RBP14.49□□□□□ -0.09
DDB1-224ENST00000545894 TNS3Q68CZ2 1445 aa14.49□□□□□ -0.09
DDB1-224ENST00000545894 GGNBP2Q9H3C7 697 aa14.49□□□□□ -0.09
DDB1-224ENST00000545894 COL16A1Q07092 1604 aaPredicted RBP14.48□□□□□ -0.09
DDB1-224ENST00000545894 NLRP6P59044 892 aa14.47□□□□□ -0.09
DDB1-224ENST00000545894 HDAC1Q13547 482 aaPredicted RBP14.47□□□□□ -0.09
DDB1-224ENST00000545894 PIK3C2AO00443 1686 aa14.47□□□□□ -0.09
DDB1-224ENST00000545894 C22orf23Q9BZE7 217 aa14.46□□□□□ -0.09
DDB1-224ENST00000545894 SMC4Q9NTJ3 1288 aa14.46□□□□□ -0.09
DDB1-224ENST00000545894 ALS2Q96Q42 1657 aa14.46□□□□□ -0.09
DDB1-224ENST00000545894 PLEKHG5O94827 1062 aa14.46□□□□□ -0.09
DDB1-224ENST00000545894 TSR2Q969E8 191 aaKnown RBP14.46□□□□□ -0.09
DDB1-224ENST00000545894 USP31Q70CQ4 1352 aa14.46□□□□□ -0.1
DDB1-224ENST00000545894 DDX19BQ9UMR2 479 aa14.45□□□□□ -0.1
DDB1-224ENST00000545894 ARHGEF10O15013 1369 aa14.45□□□□□ -0.1
DDB1-224ENST00000545894 TRIM27P14373 513 aa14.45□□□□□ -0.1
DDB1-224ENST00000545894 MCM4P33991 863 aa14.45□□□□□ -0.1
DDB1-224ENST00000545894 EXOSC9Q06265 439 aaKnown RBP14.45□□□□□ -0.1
DDB1-224ENST00000545894 RSPH6AQ9H0K4 717 aa14.45□□□□□ -0.1
DDB1-224ENST00000545894 PNPLA6Q8IY17 1366 aa14.45□□□□□ -0.1
DDB1-224ENST00000545894 MFAP1P55081 439 aaKnown RBP14.44□□□□□ -0.1
DDB1-224ENST00000545894 COG3Q96JB2 828 aa14.44□□□□□ -0.1
DDB1-224ENST00000545894 CHMP5Q9NZZ3 219 aa14.44□□□□□ -0.1
DDB1-224ENST00000545894 CABLES1Q8TDN4 633 aa14.44□□□□□ -0.1
DDB1-224ENST00000545894 PLEKHF1Q96S99 279 aa14.44□□□□□ -0.1
DDB1-224ENST00000545894 OVOS2A0A0J9YW53 1432 aa14.44□□□□□ -0.1
DDB1-224ENST00000545894 OVOS2Q6IE36 1432 aa14.44□□□□□ -0.1
DDB1-224ENST00000545894 TMPOP42166 694 aaKnown RBP14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms