RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 CASZ1Q86V15 1759 aa23.25■■□□□ 1.31
DDX55-212ENST00000544738 PARP4Q9UKK3 1724 aaKnown RBP23.25■■□□□ 1.31
DDX55-212ENST00000544738 NEUROD1Q13562 356 aa23.24■■□□□ 1.31
DDX55-212ENST00000544738 MTFR1LQ9H019 292 aa23.24■■□□□ 1.31
DDX55-212ENST00000544738 MYOM1P52179 1685 aa23.24■■□□□ 1.31
DDX55-212ENST00000544738 LMO7Q8WWI1 1683 aa23.24■■□□□ 1.31
DDX55-212ENST00000544738 CENPJQ9HC77 1338 aaPredicted RBP23.24■■□□□ 1.31
DDX55-212ENST00000544738 CEP350Q5VT06 3117 aa23.21■■□□□ 1.31
DDX55-212ENST00000544738 NLRP6P59044 892 aa23.21■■□□□ 1.31
DDX55-212ENST00000544738 ARXQ96QS3 562 aa23.21■■□□□ 1.31
DDX55-212ENST00000544738 PEAK1Q9H792 1746 aa23.21■■□□□ 1.31
DDX55-212ENST00000544738 GPR162Q16538 588 aa23.2■■□□□ 1.3
DDX55-212ENST00000544738 SGIP1Q9BQI5 828 aa23.19■■□□□ 1.3
DDX55-212ENST00000544738 SBF2Q86WG5 1849 aa23.19■■□□□ 1.3
DDX55-212ENST00000544738 AATKQ6ZMQ8 1374 aa23.18■■□□□ 1.3
DDX55-212ENST00000544738 GIGYF1O75420 1035 aaPredicted RBP23.18■■□□□ 1.3
DDX55-212ENST00000544738 SRPK2P78362 688 aaKnown RBP23.18■■□□□ 1.3
DDX55-212ENST00000544738 CDCA7Q9BWT1 371 aaPredicted RBP23.18■■□□□ 1.3
DDX55-212ENST00000544738 RGPD3A6NKT7 1758 aaPredicted RBP23.18■■□□□ 1.3
DDX55-212ENST00000544738 RGPD4Q7Z3J3 1758 aa23.18■■□□□ 1.3
DDX55-212ENST00000544738 AXIN2Q9Y2T1 843 aa23.17■■□□□ 1.3
DDX55-212ENST00000544738 EXOC5O00471 708 aa23.16■■□□□ 1.3
DDX55-212ENST00000544738 TOPAZ1Q8N9V7 1692 aa23.16■■□□□ 1.3
DDX55-212ENST00000544738 CHD4Q14839 1912 aa23.16■■□□□ 1.3
DDX55-212ENST00000544738 CSB-PGBD3P0DP91 1061 aa23.15■■□□□ 1.3
DDX55-212ENST00000544738 WDR17Q8IZU2 1322 aa23.14■■□□□ 1.3
DDX55-212ENST00000544738 CABP2Q9NPB3 220 aa23.14■■□□□ 1.29
DDX55-212ENST00000544738 LRRC37A3O60309 1634 aa23.14■■□□□ 1.29
DDX55-212ENST00000544738 TRPM1Q7Z4N2 1603 aa23.14■■□□□ 1.29
DDX55-212ENST00000544738 ROCK2O75116 1388 aaKnown RBP23.14■■□□□ 1.29
DDX55-212ENST00000544738 PELP1Q8IZL8 1130 aaKnown RBP23.13■■□□□ 1.29
DDX55-212ENST00000544738 KLHL34Q8N239 644 aa23.13■■□□□ 1.29
DDX55-212ENST00000544738 PPIP5K1Q6PFW1 1433 aa23.13■■□□□ 1.29
DDX55-212ENST00000544738 BCL9O00512 1426 aa23.12■■□□□ 1.29
DDX55-212ENST00000544738 QRICH2Q9H0J4 1663 aa23.12■■□□□ 1.29
DDX55-212ENST00000544738 GOLGB1Q14789 3259 aaKnown RBP23.11■■□□□ 1.29
DDX55-212ENST00000544738 ACSBG1Q96GR2 724 aa23.11■■□□□ 1.29
DDX55-212ENST00000544738 CABP1Q9NZU7 370 aa23.11■■□□□ 1.29
DDX55-212ENST00000544738 EVC2Q86UK5 1308 aa23.1■■□□□ 1.29
DDX55-212ENST00000544738 SOX12O15370 315 aa23.1■■□□□ 1.29
DDX55-212ENST00000544738 TRIM26Q12899 539 aaPredicted RBP23.1■■□□□ 1.29
DDX55-212ENST00000544738 CARD10Q9BWT7 1032 aa23.1■■□□□ 1.29
DDX55-212ENST00000544738 BRD4O60885 1362 aaPredicted RBP23.1■■□□□ 1.29
DDX55-212ENST00000544738 ARHGEF25Q86VW2 580 aa23.06■■□□□ 1.28
DDX55-212ENST00000544738 MAP3K5Q99683 1374 aa23.05■■□□□ 1.28
DDX55-212ENST00000544738 TONSLQ96HA7 1378 aa23.04■■□□□ 1.28
DDX55-212ENST00000544738 USP6P35125 1406 aa23.03■■□□□ 1.28
DDX55-212ENST00000544738 ZNF827Q17R98 1081 aa23.03■■□□□ 1.28
DDX55-212ENST00000544738 POLD1P28340 1107 aa23.02■■□□□ 1.28
DDX55-212ENST00000544738 KCNH5Q8NCM2 988 aa23.01■■□□□ 1.27
DDX55-212ENST00000544738 SLIT3O75094 1523 aa23.01■■□□□ 1.27
DDX55-212ENST00000544738 AKAP12Q02952 1782 aa23.01■■□□□ 1.27
DDX55-212ENST00000544738 CPSF1Q10570 1443 aaKnown RBP23■■□□□ 1.27
DDX55-212ENST00000544738 ZNF692Q9BU19 519 aaPredicted RBP23■■□□□ 1.27
DDX55-212ENST00000544738 CARD11Q9BXL7 1154 aa23■■□□□ 1.27
DDX55-212ENST00000544738 COL18A1P39060 1754 aa22.99■■□□□ 1.27
DDX55-212ENST00000544738 LRRC4BQ9NT99 713 aa22.99■■□□□ 1.27
DDX55-212ENST00000544738 SBNO2Q9Y2G9 1366 aa22.98■■□□□ 1.27
DDX55-212ENST00000544738 NLGN2Q8NFZ4 835 aa22.97■■□□□ 1.27
DDX55-212ENST00000544738 SLC16A10Q8TF71 515 aa22.97■■□□□ 1.27
DDX55-212ENST00000544738 CCDC7Q96M83 1385 aa22.97■■□□□ 1.27
DDX55-212ENST00000544738 TTC21BQ7Z4L5 1316 aa22.95■■□□□ 1.26
DDX55-212ENST00000544738 KAT6BQ8WYB5 2073 aa22.95■■□□□ 1.26
DDX55-212ENST00000544738 NLRP2Q9NX02 1062 aa22.95■■□□□ 1.26
DDX55-212ENST00000544738 TNS2Q63HR2 1409 aa22.94■■□□□ 1.26
DDX55-212ENST00000544738 AKT1S1Q96B36 256 aa22.94■■□□□ 1.26
DDX55-212ENST00000544738 WNK3Q9BYP7 1800 aa22.94■■□□□ 1.26
DDX55-212ENST00000544738 GRIN3BO60391 1043 aa22.93■■□□□ 1.26
DDX55-212ENST00000544738 TFCP2L1Q9NZI6 479 aa22.93■■□□□ 1.26
DDX55-212ENST00000544738 IL2RBP14784 551 aa22.91■■□□□ 1.26
DDX55-212ENST00000544738 YBX3P16989 372 aaKnown RBP eCLIP22.91■■□□□ 1.26
DDX55-212ENST00000544738 RGPD5Q99666 1765 aa22.91■■□□□ 1.26
DDX55-212ENST00000544738 PNPLA7Q6ZV29 1317 aa22.9■■□□□ 1.26
DDX55-212ENST00000544738 TTC21AQ8NDW8 1320 aa22.9■■□□□ 1.26
DDX55-212ENST00000544738 KCNQ4P56696 695 aa22.9■■□□□ 1.26
DDX55-212ENST00000544738 PIK3C2AO00443 1686 aa22.9■■□□□ 1.26
DDX55-212ENST00000544738 NHSQ6T4R5 1651 aa22.88■■□□□ 1.25
DDX55-212ENST00000544738 SLC27A3Q5K4L6 730 aa22.88■■□□□ 1.25
DDX55-212ENST00000544738 PAPPAQ13219 1627 aa22.88■■□□□ 1.25
DDX55-212ENST00000544738 KTN1Q86UP2 1357 aaKnown RBP22.88■■□□□ 1.25
DDX55-212ENST00000544738 MSH5O43196 834 aa22.87■■□□□ 1.25
DDX55-212ENST00000544738 SHANK3Q9BYB0 1731 aa22.87■■□□□ 1.25
DDX55-212ENST00000544738 SLC24A1O60721 1099 aa22.86■■□□□ 1.25
DDX55-212ENST00000544738 DDX54Q8TDD1 881 aaKnown RBP22.86■■□□□ 1.25
DDX55-212ENST00000544738 PUS7Q96PZ0 661 aaKnown RBP22.86■■□□□ 1.25
DDX55-212ENST00000544738 GPBP1L1Q9HC44 474 aaPredicted RBP22.86■■□□□ 1.25
DDX55-212ENST00000544738 ZNF526Q8TF50 670 aaPredicted RBP22.84■■□□□ 1.25
DDX55-212ENST00000544738 SYTL4Q96C24 671 aaPredicted RBP22.84■■□□□ 1.25
DDX55-212ENST00000544738 ERBB3P21860 1342 aa22.83■■□□□ 1.25
DDX55-212ENST00000544738 ATP10DQ9P241 1426 aa22.83■■□□□ 1.25
DDX55-212ENST00000544738 BTAF1O14981 1849 aa22.83■■□□□ 1.25
DDX55-212ENST00000544738 HSPA6P17066 643 aa22.83■■□□□ 1.25
DDX55-212ENST00000544738 HDGFL2Q7Z4V5 671 aaPredicted RBP22.82■■□□□ 1.24
DDX55-212ENST00000544738 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.82■■□□□ 1.24
DDX55-212ENST00000544738 TMC1Q8TDI8 760 aa22.82■■□□□ 1.24
DDX55-212ENST00000544738 ANKRD24Q8TF21 1146 aa22.82■■□□□ 1.24
DDX55-212ENST00000544738 ABCC6O95255 1503 aa22.82■■□□□ 1.24
DDX55-212ENST00000544738 PRIM1P49642 420 aaKnown RBP22.8■■□□□ 1.24
DDX55-212ENST00000544738 TERF2IPQ9NYB0 399 aa22.8■■□□□ 1.24
DDX55-212ENST00000544738 NFAT5O94916 1531 aa22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms