RNA–Protein interactions for RNA: ENST00000543988.1

OTUB1-212, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 1 (best) BASIC

Gene OTUB1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-212ENST00000543988 SPATA31A1Q5TZJ5 1347 aa30.15■■■□□ 2.42
OTUB1-212ENST00000543988 ABCC6O95255 1503 aa30.13■■■□□ 2.41
OTUB1-212ENST00000543988 FAM98CQ17RN3 349 aaKnown RBP30.13■■■□□ 2.41
OTUB1-212ENST00000543988 ONECUT3O60422 494 aaPredicted RBP30.12■■■□□ 2.41
OTUB1-212ENST00000543988 SEPT12Q8IYM1 358 aa30.12■■■□□ 2.41
OTUB1-212ENST00000543988 PANK3Q9H999 370 aa30.1■■■□□ 2.41
OTUB1-212ENST00000543988 KIF20BQ96Q89 1820 aa30.09■■■□□ 2.41
OTUB1-212ENST00000543988 USP35Q9P2H5 1018 aa30.09■■■□□ 2.41
OTUB1-212ENST00000543988 A0A0G2JS52 829 aa30.08■■■□□ 2.41
OTUB1-212ENST00000543988 MYT1Q01538 1121 aa30.08■■■□□ 2.41
OTUB1-212ENST00000543988 CRB1P82279 1406 aa30.07■■■□□ 2.4
OTUB1-212ENST00000543988 CGNL1Q0VF96 1302 aa30.07■■■□□ 2.4
OTUB1-212ENST00000543988 WDR17Q8IZU2 1322 aa30.06■■■□□ 2.4
OTUB1-212ENST00000543988 FBLN1P23142 703 aa30.06■■■□□ 2.4
OTUB1-212ENST00000543988 THSD7AQ9UPZ6 1657 aa30.06■■■□□ 2.4
OTUB1-212ENST00000543988 CCDC7Q96M83 1385 aa30.04■■■□□ 2.4
OTUB1-212ENST00000543988 MAP3K19Q56UN5 1328 aa30.04■■■□□ 2.4
OTUB1-212ENST00000543988 TCP11L2Q8N4U5 519 aa30.04■■■□□ 2.4
OTUB1-212ENST00000543988 LTN1O94822 1766 aa30.04■■■□□ 2.4
OTUB1-212ENST00000543988 WASHC2AQ641Q2 1341 aa30.02■■■□□ 2.4
OTUB1-212ENST00000543988 TOM1L2Q6ZVM7 507 aa30.02■■■□□ 2.4
OTUB1-212ENST00000543988 CSB-PGBD3P0DP91 1061 aa30.01■■■□□ 2.39
OTUB1-212ENST00000543988 BARGINQ6ZT62 677 aa30.01■■■□□ 2.39
OTUB1-212ENST00000543988 UPF1Q92900 1129 aaKnown RBP eCLIP30.01■■■□□ 2.392e-7■■□□□ 12.6
OTUB1-212ENST00000543988 ERBB3P21860 1342 aa30■■■□□ 2.39
OTUB1-212ENST00000543988 RRS1Q15050 365 aaKnown RBP30■■■□□ 2.39
OTUB1-212ENST00000543988 BLMP54132 1417 aaPredicted RBP29.99■■■□□ 2.39
OTUB1-212ENST00000543988 IP6K1Q92551 441 aa29.99■■■□□ 2.39
OTUB1-212ENST00000543988 RGPD5Q99666 1765 aa29.99■■■□□ 2.39
OTUB1-212ENST00000543988 BRWD3Q6RI45 1802 aa29.99■■■□□ 2.39
OTUB1-212ENST00000543988 KRT27Q7Z3Y8 459 aa29.98■■■□□ 2.39
OTUB1-212ENST00000543988 THRAP3Q9Y2W1 955 aaKnown RBP29.98■■■□□ 2.39
OTUB1-212ENST00000543988 RTL1A6NKG5 1358 aa29.97■■■□□ 2.39
OTUB1-212ENST00000543988 HOXC9P31274 260 aa29.96■■■□□ 2.39
OTUB1-212ENST00000543988 AMPHP49418 695 aa29.96■■■□□ 2.39
OTUB1-212ENST00000543988 ANKRD24Q8TF21 1146 aa29.96■■■□□ 2.39
OTUB1-212ENST00000543988 CARD10Q9BWT7 1032 aa29.95■■■□□ 2.39
OTUB1-212ENST00000543988 EP400Q96L91 3159 aa29.93■■■□□ 2.38
OTUB1-212ENST00000543988 NSD2O96028 1365 aa29.92■■■□□ 2.38
OTUB1-212ENST00000543988 KNSTRNQ9Y448 316 aa29.92■■■□□ 2.38
OTUB1-212ENST00000543988 LTV1Q96GA3 475 aaPredicted RBP29.91■■■□□ 2.38
OTUB1-212ENST00000543988 NLRP2Q9NX02 1062 aa29.91■■■□□ 2.38
OTUB1-212ENST00000543988 EMILIN1Q9Y6C2 1016 aa29.9■■■□□ 2.38
OTUB1-212ENST00000543988 PEAK1Q9H792 1746 aa29.9■■■□□ 2.38
OTUB1-212ENST00000543988 DISP2A7MBM2 1401 aa29.89■■■□□ 2.38
OTUB1-212ENST00000543988 ANKRD26Q9UPS8 1709 aa29.89■■■□□ 2.38
OTUB1-212ENST00000543988 FAM182BQ5T319 152 aa29.88■■■□□ 2.37
OTUB1-212ENST00000543988 FLT4P35916 1363 aa29.88■■■□□ 2.37
OTUB1-212ENST00000543988 KIF24Q5T7B8 1368 aa29.88■■■□□ 2.37
OTUB1-212ENST00000543988 TNNT2P45379 298 aaPredicted RBP29.87■■■□□ 2.37
OTUB1-212ENST00000543988 AMER1Q5JTC6 1135 aaPredicted RBP29.87■■■□□ 2.37
OTUB1-212ENST00000543988 PARP4Q9UKK3 1724 aaKnown RBP29.86■■■□□ 2.37
OTUB1-212ENST00000543988 LRRC37A3O60309 1634 aa29.85■■■□□ 2.37
OTUB1-212ENST00000543988 WNK3Q9BYP7 1800 aa29.85■■■□□ 2.37
OTUB1-212ENST00000543988 PER1O15534 1290 aaPredicted RBP29.84■■■□□ 2.37
OTUB1-212ENST00000543988 HSP90AB2PQ58FF8 381 aa29.84■■■□□ 2.37
OTUB1-212ENST00000543988 INSRP06213 1382 aa29.84■■■□□ 2.37
OTUB1-212ENST00000543988 PDE3BQ13370 1112 aa29.83■■■□□ 2.37
OTUB1-212ENST00000543988 CDCA7Q9BWT1 371 aaPredicted RBP29.83■■■□□ 2.37
OTUB1-212ENST00000543988 POLKQ9UBT6 870 aa29.82■■■□□ 2.36
OTUB1-212ENST00000543988 FAM208AQ9UK61 1670 aaKnown RBP29.82■■■□□ 2.36
OTUB1-212ENST00000543988 PPM1GO15355 546 aaPredicted RBP29.81■■■□□ 2.36
OTUB1-212ENST00000543988 MORC1Q86VD1 984 aa29.81■■■□□ 2.36
OTUB1-212ENST00000543988 SMG6Q86US8 1419 aaKnown RBP29.8■■■□□ 2.36
OTUB1-212ENST00000543988 DDB1Q16531 1140 aa29.8■■■□□ 2.36
OTUB1-212ENST00000543988 TNS2Q63HR2 1409 aa29.77■■■□□ 2.36
OTUB1-212ENST00000543988 IL2RBP14784 551 aa29.76■■■□□ 2.35
OTUB1-212ENST00000543988 ZEB1P37275 1124 aaPredicted RBP29.76■■■□□ 2.35
OTUB1-212ENST00000543988 CCDC125Q86Z20 511 aa29.76■■■□□ 2.35
OTUB1-212ENST00000543988 NBPF6Q5VWK0 638 aa29.75■■■□□ 2.35
OTUB1-212ENST00000543988 NBPF4Q96M43 638 aa29.75■■■□□ 2.35
OTUB1-212ENST00000543988 CC2D1BQ5T0F9 858 aaKnown RBP29.74■■■□□ 2.35
OTUB1-212ENST00000543988 FAM196AQ6ZSG2 479 aa29.74■■■□□ 2.35
OTUB1-212ENST00000543988 USHBP1Q8N6Y0 703 aa29.73■■■□□ 2.35
OTUB1-212ENST00000543988 NPC1L1Q9UHC9 1359 aa29.73■■■□□ 2.35
OTUB1-212ENST00000543988 OVOS2A0A0G2JMS6 1433 aa29.72■■■□□ 2.35
OTUB1-212ENST00000543988 MARCH10Q8NA82 808 aaPredicted RBP29.71■■■□□ 2.35
OTUB1-212ENST00000543988 RGPD2P0DJD1 1756 aa29.7■■■□□ 2.35
OTUB1-212ENST00000543988 EXOC5O00471 708 aa29.7■■■□□ 2.35
OTUB1-212ENST00000543988 MEGF6O75095 1541 aa29.7■■■□□ 2.34
OTUB1-212ENST00000543988 MAP2P11137 1827 aaKnown RBP29.69■■■□□ 2.34
OTUB1-212ENST00000543988 SF3B2Q13435 895 aaKnown RBP29.68■■■□□ 2.34
OTUB1-212ENST00000543988 CNGB1Q14028 1251 aaPredicted RBP29.67■■■□□ 2.34
OTUB1-212ENST00000543988 TRIM37O94972 964 aa29.66■■■□□ 2.34
OTUB1-212ENST00000543988 EIF4A2Q14240 407 aaKnown RBP29.66■■■□□ 2.34
OTUB1-212ENST00000543988 NCAPD2Q15021 1401 aa29.65■■■□□ 2.34
OTUB1-212ENST00000543988 DEFB132Q7Z7B7 95 aa29.65■■■□□ 2.34
OTUB1-212ENST00000543988 RGPD1P0DJD0 1748 aa29.64■■■□□ 2.34
OTUB1-212ENST00000543988 BCL9O00512 1426 aa29.62■■■□□ 2.33
OTUB1-212ENST00000543988 TNS1Q9HBL0 1735 aaKnown RBP29.62■■■□□ 2.33
OTUB1-212ENST00000543988 EYA1Q99502 592 aa29.62■■■□□ 2.33
OTUB1-212ENST00000543988 RAPGEF4Q8WZA2 1011 aa29.61■■■□□ 2.33
OTUB1-212ENST00000543988 BAG6P46379 1132 aa29.59■■■□□ 2.33
OTUB1-212ENST00000543988 MTHFSP49914 203 aa29.58■■■□□ 2.33
OTUB1-212ENST00000543988 TATP17735 454 aaPredicted RBP29.57■■■□□ 2.32
OTUB1-212ENST00000543988 ZCRB1Q8TBF4 217 aaKnown RBP29.57■■■□□ 2.32
OTUB1-212ENST00000543988 DDX54Q8TDD1 881 aaKnown RBP29.56■■■□□ 2.32
OTUB1-212ENST00000543988 IGSF1Q8N6C5 1336 aa29.55■■■□□ 2.32
OTUB1-212ENST00000543988 APBA3O96018 575 aa29.54■■■□□ 2.32
OTUB1-212ENST00000543988 EN1Q05925 392 aaPredicted RBP29.54■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 118.8 ms