RNA–Protein interactions for RNA: ENST00000543941.1

C1RL-209, Transcript of complement C1r subcomponent like, humanhuman

TSL 3

Gene C1RL, Length 539 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1RL-209ENST00000543941 USP54Q70EL1 1684 aa16.22■□□□□ 0.19
C1RL-209ENST00000543941 FAM196AQ6ZSG2 479 aa16.22■□□□□ 0.19
C1RL-209ENST00000543941 PTF1AQ7RTS3 328 aa16.22■□□□□ 0.19
C1RL-209ENST00000543941 NME9Q86XW9 330 aa16.22■□□□□ 0.19
C1RL-209ENST00000543941 TONSLQ96HA7 1378 aa16.22■□□□□ 0.19
C1RL-209ENST00000543941 TTC21AQ8NDW8 1320 aa16.21■□□□□ 0.19
C1RL-209ENST00000543941 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.21■□□□□ 0.195e-7■■■□□ 16.7
C1RL-209ENST00000543941 THRAP3Q9Y2W1 955 aaKnown RBP16.21■□□□□ 0.19
C1RL-209ENST00000543941 RREB1Q92766 1687 aa16.21■□□□□ 0.18
C1RL-209ENST00000543941 USP31Q70CQ4 1352 aa16.2■□□□□ 0.18
C1RL-209ENST00000543941 PDE3BQ13370 1112 aa16.19■□□□□ 0.18
C1RL-209ENST00000543941 NUP188Q5SRE5 1749 aa16.19■□□□□ 0.18
C1RL-209ENST00000543941 WDR17Q8IZU2 1322 aa16.19■□□□□ 0.18
C1RL-209ENST00000543941 ST20-MTHFSA0A0A6YYL1 179 aa16.18■□□□□ 0.18
C1RL-209ENST00000543941 APBA3O96018 575 aa16.18■□□□□ 0.18
C1RL-209ENST00000543941 LRP5O75197 1615 aa16.18■□□□□ 0.18
C1RL-209ENST00000543941 A0A1W2PP64 1363 aa16.17■□□□□ 0.18
C1RL-209ENST00000543941 R3HDM1Q15032 1099 aaKnown RBP16.17■□□□□ 0.18
C1RL-209ENST00000543941 TOM1L2Q6ZVM7 507 aa16.17■□□□□ 0.18
C1RL-209ENST00000543941 MARCH10Q8NA82 808 aaPredicted RBP16.17■□□□□ 0.18
C1RL-209ENST00000543941 LTN1O94822 1766 aa16.17■□□□□ 0.18
C1RL-209ENST00000543941 KCNH5Q8NCM2 988 aa16.16■□□□□ 0.18
C1RL-209ENST00000543941 TMC1Q8TDI8 760 aa16.16■□□□□ 0.18
C1RL-209ENST00000543941 FBLN1P23142 703 aa16.15■□□□□ 0.18
C1RL-209ENST00000543941 OVOS2A0A0J9YW53 1432 aa16.13■□□□□ 0.17
C1RL-209ENST00000543941 OVOS2Q6IE36 1432 aa16.13■□□□□ 0.17
C1RL-209ENST00000543941 DDB1Q16531 1140 aa16.13■□□□□ 0.17
C1RL-209ENST00000543941 PUS7Q96PZ0 661 aaKnown RBP16.13■□□□□ 0.17
C1RL-209ENST00000543941 CARD10Q9BWT7 1032 aa16.13■□□□□ 0.17
C1RL-209ENST00000543941 EDC4Q6P2E9 1401 aaKnown RBP16.12■□□□□ 0.17
C1RL-209ENST00000543941 PROM2Q8N271 834 aa16.12■□□□□ 0.17
C1RL-209ENST00000543941 OVOS2A0A0G2JMS6 1433 aa16.11■□□□□ 0.17
C1RL-209ENST00000543941 ABCC6O95255 1503 aa16.1■□□□□ 0.17
C1RL-209ENST00000543941 HDGFL2Q7Z4V5 671 aaPredicted RBP16.1■□□□□ 0.17
C1RL-209ENST00000543941 RGPD2P0DJD1 1756 aa16.09■□□□□ 0.17
C1RL-209ENST00000543941 CSB-PGBD3P0DP91 1061 aa16.09■□□□□ 0.17
C1RL-209ENST00000543941 ERBB3P21860 1342 aa16.09■□□□□ 0.17
C1RL-209ENST00000543941 PARD3Q8TEW0 1356 aa16.09■□□□□ 0.17
C1RL-209ENST00000543941 BCL9O00512 1426 aa16.08■□□□□ 0.16
C1RL-209ENST00000543941 KCNQ2O43526 872 aa16.07■□□□□ 0.16
C1RL-209ENST00000543941 ANO8Q9HCE9 1232 aaPredicted RBP16.07■□□□□ 0.16
C1RL-209ENST00000543941 TERF2IPQ9NYB0 399 aa16.07■□□□□ 0.16
C1RL-209ENST00000543941 RGPD3A6NKT7 1758 aaPredicted RBP16.06■□□□□ 0.16
C1RL-209ENST00000543941 RGPD4Q7Z3J3 1758 aa16.06■□□□□ 0.16
C1RL-209ENST00000543941 USP47Q96K76 1375 aa16.06■□□□□ 0.16
C1RL-209ENST00000543941 CCDC7Q96M83 1385 aa16.06■□□□□ 0.16
C1RL-209ENST00000543941 CLSPNQ9HAW4 1339 aa16.06■□□□□ 0.16
C1RL-209ENST00000543941 PLSCR1O15162 318 aa16.06■□□□□ 0.16
C1RL-209ENST00000543941 ANKRD24Q8TF21 1146 aa16.06■□□□□ 0.16
C1RL-209ENST00000543941 BCL11BQ9C0K0 894 aaPredicted RBP16.06■□□□□ 0.16
C1RL-209ENST00000543941 CDCA7Q9BWT1 371 aaPredicted RBP16.05■□□□□ 0.16
C1RL-209ENST00000543941 PDGFDQ9GZP0 370 aaPredicted RBP16.05■□□□□ 0.16
C1RL-209ENST00000543941 TNS2Q63HR2 1409 aa16.04■□□□□ 0.16
C1RL-209ENST00000543941 EXOC5O00471 708 aa16.04■□□□□ 0.16
C1RL-209ENST00000543941 IP6K1Q92551 441 aa16.04■□□□□ 0.16
C1RL-209ENST00000543941 NLRP2Q9NX02 1062 aa16.04■□□□□ 0.16
C1RL-209ENST00000543941 FAM208AQ9UK61 1670 aaKnown RBP16.04■□□□□ 0.16
C1RL-209ENST00000543941 MAP3K19Q56UN5 1328 aa16.03■□□□□ 0.16
C1RL-209ENST00000543941 MYOM1P52179 1685 aa16.03■□□□□ 0.16
C1RL-209ENST00000543941 FYB1O15117 783 aa16.03■□□□□ 0.16
C1RL-209ENST00000543941 ANKRD36BQ8N2N9 1353 aa16.02■□□□□ 0.16
C1RL-209ENST00000543941 ACSBG1Q96GR2 724 aa16.02■□□□□ 0.16
C1RL-209ENST00000543941 CASZ1Q86V15 1759 aa16.02■□□□□ 0.15
C1RL-209ENST00000543941 NHSQ6T4R5 1651 aa16.02■□□□□ 0.15
C1RL-209ENST00000543941 LTV1Q96GA3 475 aaPredicted RBP16.01■□□□□ 0.15
C1RL-209ENST00000543941 CARD14Q9BXL6 1004 aa16.01■□□□□ 0.15
C1RL-209ENST00000543941 GGNBP2Q9H3C7 697 aa16.01■□□□□ 0.15
C1RL-209ENST00000543941 SHANK3Q9BYB0 1731 aa16.01■□□□□ 0.15
C1RL-209ENST00000543941 NINLQ9Y2I6 1382 aa16■□□□□ 0.15
C1RL-209ENST00000543941 C11orf95C9JLR9 678 aaPredicted RBP16■□□□□ 0.15
C1RL-209ENST00000543941 IL2RBP14784 551 aa16■□□□□ 0.15
C1RL-209ENST00000543941 HOXC9P31274 260 aa16■□□□□ 0.15
C1RL-209ENST00000543941 BTAF1O14981 1849 aa15.99■□□□□ 0.15
C1RL-209ENST00000543941 RRS1Q15050 365 aaKnown RBP15.99■□□□□ 0.15
C1RL-209ENST00000543941 TMF1P82094 1093 aa15.98■□□□□ 0.15
C1RL-209ENST00000543941 TXNRD1Q16881 649 aa15.98■□□□□ 0.15
C1RL-209ENST00000543941 NBPF14Q5TI25 921 aa15.98■□□□□ 0.15
C1RL-209ENST00000543941 COG3Q96JB2 828 aa15.98■□□□□ 0.15
C1RL-209ENST00000543941 KIF20BQ96Q89 1820 aa15.97■□□□□ 0.15
C1RL-209ENST00000543941 KAT6BQ8WYB5 2073 aa15.97■□□□□ 0.15
C1RL-209ENST00000543941 NBPF6Q5VWK0 638 aa15.96■□□□□ 0.15
C1RL-209ENST00000543941 NBPF4Q96M43 638 aa15.96■□□□□ 0.15
C1RL-209ENST00000543941 MEGF6O75095 1541 aa15.95■□□□□ 0.14
C1RL-209ENST00000543941 PAPPAQ13219 1627 aa15.95■□□□□ 0.14
C1RL-209ENST00000543941 USHBP1Q8N6Y0 703 aa15.94■□□□□ 0.14
C1RL-209ENST00000543941 LRRC4BQ9NT99 713 aa15.94■□□□□ 0.14
C1RL-209ENST00000543941 AMPHP49418 695 aa15.93■□□□□ 0.14
C1RL-209ENST00000543941 HSP90AB2PQ58FF8 381 aa15.93■□□□□ 0.14
C1RL-209ENST00000543941 SLC24A1O60721 1099 aa15.92■□□□□ 0.14
C1RL-209ENST00000543941 DDX54Q8TDD1 881 aaKnown RBP15.92■□□□□ 0.14
C1RL-209ENST00000543941 TIMELESSQ9UNS1 1208 aa15.92■□□□□ 0.14
C1RL-209ENST00000543941 DOT1LQ8TEK3 1739 aa15.91■□□□□ 0.14
C1RL-209ENST00000543941 NSD2O96028 1365 aa15.91■□□□□ 0.14
C1RL-209ENST00000543941 PTGER2P43116 358 aa15.91■□□□□ 0.14
C1RL-209ENST00000543941 SLC15A2Q16348 729 aa15.91■□□□□ 0.14
C1RL-209ENST00000543941 SPON1Q9HCB6 807 aa15.91■□□□□ 0.14
C1RL-209ENST00000543941 NSD3Q9BZ95 1437 aa15.91■□□□□ 0.14
C1RL-209ENST00000543941 ZBTB7AO95365 584 aa15.9■□□□□ 0.14
C1RL-209ENST00000543941 KCNQ4P56696 695 aa15.9■□□□□ 0.14
C1RL-209ENST00000543941 ZNF827Q17R98 1081 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 111 ms