RNA–Protein interactions for RNA: ENST00000543627.1

DDB1-222, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-222ENST00000543627 PANK3Q9H999 370 aa15.24■□□□□ 0.03
DDB1-222ENST00000543627 AATKQ6ZMQ8 1374 aa15.24■□□□□ 0.03
DDB1-222ENST00000543627 SLIT3O75094 1523 aa15.23■□□□□ 0.03
DDB1-222ENST00000543627 AMPHP49418 695 aa15.23■□□□□ 0.03
DDB1-222ENST00000543627 CNGB1Q14028 1251 aaPredicted RBP15.23■□□□□ 0.03
DDB1-222ENST00000543627 NSD3Q9BZ95 1437 aa15.23■□□□□ 0.03
DDB1-222ENST00000543627 NRAPQ86VF7 1730 aa15.23■□□□□ 0.03
DDB1-222ENST00000543627 TCP11L2Q8N4U5 519 aa15.22■□□□□ 0.03
DDB1-222ENST00000543627 ONECUT3O60422 494 aaPredicted RBP15.21■□□□□ 0.03
DDB1-222ENST00000543627 TNNT2P45379 298 aaPredicted RBP15.21■□□□□ 0.03
DDB1-222ENST00000543627 RRS1Q15050 365 aaKnown RBP15.21■□□□□ 0.03
DDB1-222ENST00000543627 NLRP2Q9NX02 1062 aa15.21■□□□□ 0.03
DDB1-222ENST00000543627 PPM1GO15355 546 aaPredicted RBP15.2■□□□□ 0.02
DDB1-222ENST00000543627 PDE3BQ13370 1112 aa15.2■□□□□ 0.02
DDB1-222ENST00000543627 COL5A2P05997 1499 aaPredicted RBP15.2■□□□□ 0.02
DDB1-222ENST00000543627 ANKRD24Q8TF21 1146 aa15.19■□□□□ 0.02
DDB1-222ENST00000543627 CGNL1Q0VF96 1302 aa15.18■□□□□ 0.02
DDB1-222ENST00000543627 KIF7Q2M1P5 1343 aa15.18■□□□□ 0.02
DDB1-222ENST00000543627 WDR17Q8IZU2 1322 aa15.18■□□□□ 0.02
DDB1-222ENST00000543627 OVOS2A0A0J9YW53 1432 aa15.18■□□□□ 0.02
DDB1-222ENST00000543627 OVOS2Q6IE36 1432 aa15.18■□□□□ 0.02
DDB1-222ENST00000543627 MAP3K19Q56UN5 1328 aa15.17■□□□□ 0.02
DDB1-222ENST00000543627 NFAT5O94916 1531 aa15.17■□□□□ 0.02
DDB1-222ENST00000543627 SF3B2Q13435 895 aaKnown RBP15.17■□□□□ 0.02
DDB1-222ENST00000543627 IP6K1Q92551 441 aa15.17■□□□□ 0.02
DDB1-222ENST00000543627 CRB1P82279 1406 aa15.17■□□□□ 0.02
DDB1-222ENST00000543627 RGPD5Q99666 1765 aa15.16■□□□□ 0.02
DDB1-222ENST00000543627 MYOM1P52179 1685 aa15.16■□□□□ 0.02
DDB1-222ENST00000543627 LMO7Q8WWI1 1683 aa15.16■□□□□ 0.02
DDB1-222ENST00000543627 BARGINQ6ZT62 677 aa15.16■□□□□ 0.02
DDB1-222ENST00000543627 THRAP3Q9Y2W1 955 aaKnown RBP15.16■□□□□ 0.02
DDB1-222ENST00000543627 KNSTRNQ9Y448 316 aa15.16■□□□□ 0.02
DDB1-222ENST00000543627 BRWD3Q6RI45 1802 aa15.15■□□□□ 0.02
DDB1-222ENST00000543627 HOXC9P31274 260 aa15.15■□□□□ 0.02
DDB1-222ENST00000543627 CARD10Q9BWT7 1032 aa15.15■□□□□ 0.02
DDB1-222ENST00000543627 DDB1Q16531 1140 aa15.14■□□□□ 0.01
DDB1-222ENST00000543627 LTN1O94822 1766 aa15.13■□□□□ 0.01
DDB1-222ENST00000543627 COL18A1P39060 1754 aa15.13■□□□□ 0.01
DDB1-222ENST00000543627 MORC1Q86VD1 984 aa15.13■□□□□ 0.01
DDB1-222ENST00000543627 EXOC5O00471 708 aa15.12■□□□□ 0.01
DDB1-222ENST00000543627 HSP90AB2PQ58FF8 381 aa15.12■□□□□ 0.01
DDB1-222ENST00000543627 EMILIN1Q9Y6C2 1016 aa15.12■□□□□ 0.01
DDB1-222ENST00000543627 KIF20BQ96Q89 1820 aa15.12■□□□□ 0.01
DDB1-222ENST00000543627 ERBB3P21860 1342 aa15.12■□□□□ 0.01
DDB1-222ENST00000543627 TRIM37O94972 964 aa15.11■□□□□ 0.01
DDB1-222ENST00000543627 USHBP1Q8N6Y0 703 aa15.11■□□□□ 0.01
DDB1-222ENST00000543627 WASHC2AQ641Q2 1341 aa15.11■□□□□ 0.01
DDB1-222ENST00000543627 CC2D1BQ5T0F9 858 aaKnown RBP15.1■□□□□ 0.01
DDB1-222ENST00000543627 FAM196AQ6ZSG2 479 aa15.1■□□□□ 0.01
DDB1-222ENST00000543627 DEFB132Q7Z7B7 95 aa15.1■□□□□ 0.01
DDB1-222ENST00000543627 CCDC125Q86Z20 511 aa15.1■□□□□ 0.01
DDB1-222ENST00000543627 CCDC7Q96M83 1385 aa15.1■□□□□ 0.01
DDB1-222ENST00000543627 USP54Q70EL1 1684 aa15.09■□□□□ 0.01
DDB1-222ENST00000543627 IL2RBP14784 551 aa15.09■□□□□ 0.01
DDB1-222ENST00000543627 CDCA7Q9BWT1 371 aaPredicted RBP15.09■□□□□ 0.01
DDB1-222ENST00000543627 BLMP54132 1417 aaPredicted RBP15.09■□□□□ 0.01
DDB1-222ENST00000543627 EP400Q96L91 3159 aa15.08■□□□□ 0.01
DDB1-222ENST00000543627 NBPF6Q5VWK0 638 aa15.07■□□□□ 0
DDB1-222ENST00000543627 NBPF4Q96M43 638 aa15.07■□□□□ 0
DDB1-222ENST00000543627 POLKQ9UBT6 870 aa15.07■□□□□ 0
DDB1-222ENST00000543627 THSD7AQ9UPZ6 1657 aa15.06■□□□□ 0
DDB1-222ENST00000543627 BAG6P46379 1132 aa15.06■□□□□ 0
DDB1-222ENST00000543627 DDX54Q8TDD1 881 aaKnown RBP15.06■□□□□ 0
DDB1-222ENST00000543627 SMG6Q86US8 1419 aaKnown RBP15.06■□□□□ 0
DDB1-222ENST00000543627 APBA3O96018 575 aa15.05■□□□□ -0
DDB1-222ENST00000543627 EN1Q05925 392 aaPredicted RBP15.05■□□□□ -0
DDB1-222ENST00000543627 MARCH10Q8NA82 808 aaPredicted RBP15.05■□□□□ -0
DDB1-222ENST00000543627 FLT4P35916 1363 aa15.05■□□□□ -0
DDB1-222ENST00000543627 ABCC6O95255 1503 aa15.04■□□□□ -0
DDB1-222ENST00000543627 RTL1A6NKG5 1358 aa15.04■□□□□ -0
DDB1-222ENST00000543627 INSRP06213 1382 aa15.03■□□□□ -0
DDB1-222ENST00000543627 RAPGEF4Q8WZA2 1011 aa15.03■□□□□ -0
DDB1-222ENST00000543627 ACSBG1Q96GR2 724 aa15.03■□□□□ -0
DDB1-222ENST00000543627 NSD2O96028 1365 aa15.02■□□□□ -0
DDB1-222ENST00000543627 AMER1Q5JTC6 1135 aaPredicted RBP15.02■□□□□ -0
DDB1-222ENST00000543627 MAP2P11137 1827 aaKnown RBP15.01□□□□□ -0.01
DDB1-222ENST00000543627 PER1O15534 1290 aaPredicted RBP15.01□□□□□ -0.01
DDB1-222ENST00000543627 TATP17735 454 aaPredicted RBP15.01□□□□□ -0.01
DDB1-222ENST00000543627 ZEB1P37275 1124 aaPredicted RBP15.01□□□□□ -0.01
DDB1-222ENST00000543627 PEAK1Q9H792 1746 aa15□□□□□ -0.01
DDB1-222ENST00000543627 EZH2Q15910 746 aaKnown RBP15□□□□□ -0.01
DDB1-222ENST00000543627 ZCRB1Q8TBF4 217 aaKnown RBP15□□□□□ -0.01
DDB1-222ENST00000543627 RGPD2P0DJD1 1756 aa15□□□□□ -0.01
DDB1-222ENST00000543627 PARP4Q9UKK3 1724 aaKnown RBP15□□□□□ -0.01
DDB1-222ENST00000543627 OVOS2A0A0G2JMS6 1433 aa15□□□□□ -0.01
DDB1-222ENST00000543627 DISP2A7MBM2 1401 aa15□□□□□ -0.01
DDB1-222ENST00000543627 EIF4A2Q14240 407 aaKnown RBP14.99□□□□□ -0.01
DDB1-222ENST00000543627 SYTL4Q96C24 671 aaPredicted RBP14.99□□□□□ -0.01
DDB1-222ENST00000543627 EYA1Q99502 592 aa14.99□□□□□ -0.01
DDB1-222ENST00000543627 LRRC37A3O60309 1634 aa14.99□□□□□ -0.01
DDB1-222ENST00000543627 KIF24Q5T7B8 1368 aa14.98□□□□□ -0.01
DDB1-222ENST00000543627 MTHFSP49914 203 aa14.98□□□□□ -0.01
DDB1-222ENST00000543627 PTF1AQ7RTS3 328 aa14.98□□□□□ -0.01
DDB1-222ENST00000543627 KAT6BQ8WYB5 2073 aa14.97□□□□□ -0.01
DDB1-222ENST00000543627 KCNQ2O43526 872 aa14.97□□□□□ -0.01
DDB1-222ENST00000543627 ANKRD26Q9UPS8 1709 aa14.97□□□□□ -0.01
DDB1-222ENST00000543627 DDX10Q13206 875 aaKnown RBP14.96□□□□□ -0.01
DDB1-222ENST00000543627 TNS2Q63HR2 1409 aa14.96□□□□□ -0.01
DDB1-222ENST00000543627 WNK3Q9BYP7 1800 aa14.96□□□□□ -0.01
DDB1-222ENST00000543627 BCL11BQ9C0K0 894 aaPredicted RBP14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 164.2 ms