RNA–Protein interactions for RNA: ENST00000543604.1

AC053513.1-201, humanhuman

TSL 3 BASIC

Gene AC053513.1, Length 738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC053513.1-201ENST00000543604 MAP3K7O43318 606 aa12.38□□□□□ -0.43
AC053513.1-201ENST00000543604 TSR1Q2NL82 804 aaKnown RBP12.38□□□□□ -0.43
AC053513.1-201ENST00000543604 PROX2Q3B8N5 592 aa12.38□□□□□ -0.43
AC053513.1-201ENST00000543604 ZFYVE9O95405 1425 aa12.37□□□□□ -0.43
AC053513.1-201ENST00000543604 RIMS2Q9UQ26 1411 aa12.37□□□□□ -0.43
AC053513.1-201ENST00000543604 KDM2AQ9Y2K7 1162 aa12.37□□□□□ -0.43
AC053513.1-201ENST00000543604 PIK3R4Q99570 1358 aa12.37□□□□□ -0.43
AC053513.1-201ENST00000543604 NUTM2BA6NNL0 878 aaPredicted RBP12.36□□□□□ -0.43
AC053513.1-201ENST00000543604 NUTM2EB1AL46 878 aaPredicted RBP12.36□□□□□ -0.43
AC053513.1-201ENST00000543604 NUTM2AQ8IVF1 878 aaPredicted RBP12.36□□□□□ -0.43
AC053513.1-201ENST00000543604 LRP6O75581 1613 aa12.36□□□□□ -0.43
AC053513.1-201ENST00000543604 BHMG1C9JSJ3 638 aaPredicted RBP12.35□□□□□ -0.43
AC053513.1-201ENST00000543604 OSBPP22059 807 aa12.35□□□□□ -0.43
AC053513.1-201ENST00000543604 BRINP3Q76B58 766 aa12.35□□□□□ -0.43
AC053513.1-201ENST00000543604 COL16A1Q07092 1604 aaPredicted RBP12.35□□□□□ -0.43
AC053513.1-201ENST00000543604 CDK12Q9NYV4 1490 aaPredicted RBP12.34□□□□□ -0.43
AC053513.1-201ENST00000543604 SETD1AO15047 1707 aaKnown RBP12.34□□□□□ -0.43
AC053513.1-201ENST00000543604 PTPN23Q9H3S7 1636 aa12.34□□□□□ -0.43
AC053513.1-201ENST00000543604 LOC105371045A0A1W2PR82 267 aa12.34□□□□□ -0.43
AC053513.1-201ENST00000543604 MLLT3P42568 568 aaPredicted RBP12.34□□□□□ -0.43
AC053513.1-201ENST00000543604 LRRC59Q96AG4 307 aaKnown RBP12.33□□□□□ -0.44
AC053513.1-201ENST00000543604 AMOTL2Q9Y2J4 779 aa12.33□□□□□ -0.44
AC053513.1-201ENST00000543604 ANKRD50Q9ULJ7 1429 aa12.33□□□□□ -0.44
AC053513.1-201ENST00000543604 AFF2P51816 1311 aa12.33□□□□□ -0.44
AC053513.1-201ENST00000543604 AHDC1Q5TGY3 1603 aaPredicted RBP12.33□□□□□ -0.44
AC053513.1-201ENST00000543604 CROCC2H7BZ55 1655 aa12.32□□□□□ -0.44
AC053513.1-201ENST00000543604 NUTM2DQ5VT03 806 aaPredicted RBP12.32□□□□□ -0.44
AC053513.1-201ENST00000543604 RBM6P78332 1123 aaKnown RBP12.31□□□□□ -0.44
AC053513.1-201ENST00000543604 KCTD12Q96CX2 325 aaKnown RBP12.31□□□□□ -0.44
AC053513.1-201ENST00000543604 QTRT2Q9H974 415 aaKnown RBP12.31□□□□□ -0.44
AC053513.1-201ENST00000543604 DCCP43146 1447 aa12.3□□□□□ -0.44
AC053513.1-201ENST00000543604 ADAMTS13Q76LX8 1427 aa12.3□□□□□ -0.44
AC053513.1-201ENST00000543604 FAM50AQ14320 339 aaKnown RBP12.3□□□□□ -0.44
AC053513.1-201ENST00000543604 SETD5Q9C0A6 1442 aa12.29□□□□□ -0.44
AC053513.1-201ENST00000543604 ADGRL2O95490 1459 aa12.29□□□□□ -0.44
AC053513.1-201ENST00000543604 MRPL50Q8N5N7 158 aaKnown RBP12.29□□□□□ -0.44
AC053513.1-201ENST00000543604 NGLY1Q96IV0 654 aa12.29□□□□□ -0.44
AC053513.1-201ENST00000543604 C8orf37Q96NL8 207 aa12.29□□□□□ -0.44
AC053513.1-201ENST00000543604 CDHR5Q9HBB8 845 aa12.29□□□□□ -0.44
AC053513.1-201ENST00000543604 KIAA1468Q9P260 1216 aa12.29□□□□□ -0.44
AC053513.1-201ENST00000543604 RABGEF1Q9UJ41 708 aa12.29□□□□□ -0.44
AC053513.1-201ENST00000543604 CHD2O14647 1828 aaKnown RBP12.29□□□□□ -0.44
AC053513.1-201ENST00000543604 DIP2AQ14689 1571 aa12.28□□□□□ -0.44
AC053513.1-201ENST00000543604 SHPRHQ149N8 1683 aa12.28□□□□□ -0.44
AC053513.1-201ENST00000543604 TMEM131LA2VDJ0 1609 aa12.27□□□□□ -0.44
AC053513.1-201ENST00000543604 SEMA3EO15041 775 aa12.27□□□□□ -0.45
AC053513.1-201ENST00000543604 NBPF3Q9H094 633 aa12.27□□□□□ -0.45
AC053513.1-201ENST00000543604 TRIM6-TRIM34B2RNG4 842 aa12.26□□□□□ -0.45
AC053513.1-201ENST00000543604 TRPM2O94759 1503 aa12.26□□□□□ -0.45
AC053513.1-201ENST00000543604 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.25□□□□□ -0.45
AC053513.1-201ENST00000543604 GOLGA8CPA6NN73 597 aa12.25□□□□□ -0.45
AC053513.1-201ENST00000543604 ASXL1Q8IXJ9 1541 aa12.25□□□□□ -0.45
AC053513.1-201ENST00000543604 RGS12O14924 1447 aa12.24□□□□□ -0.45
AC053513.1-201ENST00000543604 ONECUT3O60422 494 aaPredicted RBP12.24□□□□□ -0.45
AC053513.1-201ENST00000543604 ATAD2Q6PL18 1390 aa12.24□□□□□ -0.45
AC053513.1-201ENST00000543604 VSIG10Q8N0Z9 540 aa12.24□□□□□ -0.45
AC053513.1-201ENST00000543604 PTPRUQ92729 1446 aa12.24□□□□□ -0.45
AC053513.1-201ENST00000543604 TSKSQ9UJT2 592 aa12.24□□□□□ -0.45
AC053513.1-201ENST00000543604 MST1RQ04912 1400 aa12.23□□□□□ -0.45
AC053513.1-201ENST00000543604 ADAMTS2O95450 1211 aa12.23□□□□□ -0.45
AC053513.1-201ENST00000543604 PNPLA6Q8IY17 1366 aa12.22□□□□□ -0.45
AC053513.1-201ENST00000543604 ZNF326Q5BKZ1 582 aaKnown RBP12.22□□□□□ -0.45
AC053513.1-201ENST00000543604 CDCA7LQ96GN5 454 aa12.22□□□□□ -0.45
AC053513.1-201ENST00000543604 HCSTQ9UBK5 93 aa12.22□□□□□ -0.45
AC053513.1-201ENST00000543604 SEPT9Q9UHD8 586 aaPredicted RBP12.22□□□□□ -0.45
AC053513.1-201ENST00000543604 GCC2Q8IWJ2 1684 aa12.22□□□□□ -0.45
AC053513.1-201ENST00000543604 NUP155O75694 1391 aa12.21□□□□□ -0.45
AC053513.1-201ENST00000543604 EP400Q96L91 3159 aa12.21□□□□□ -0.45
AC053513.1-201ENST00000543604 PRSS12P56730 875 aa12.21□□□□□ -0.45
AC053513.1-201ENST00000543604 DDX17Q92841 729 aaKnown RBP12.21□□□□□ -0.45
AC053513.1-201ENST00000543604 WNT2BQ93097 391 aa12.21□□□□□ -0.45
AC053513.1-201ENST00000543604 FAM198AQ9UFP1 575 aa12.21□□□□□ -0.45
AC053513.1-201ENST00000543604 USP21Q9UK80 565 aa12.21□□□□□ -0.45
AC053513.1-201ENST00000543604 TRPC5Q9UL62 973 aaPredicted RBP12.21□□□□□ -0.45
AC053513.1-201ENST00000543604 PTPN5P54829 565 aa12.2□□□□□ -0.46
AC053513.1-201ENST00000543604 CCDC125Q86Z20 511 aa12.2□□□□□ -0.46
AC053513.1-201ENST00000543604 METP08581 1390 aa12.19□□□□□ -0.46
AC053513.1-201ENST00000543604 ROCK1Q13464 1354 aa12.19□□□□□ -0.46
AC053513.1-201ENST00000543604 FNBP4Q8N3X1 1017 aaPredicted RBP12.19□□□□□ -0.46
AC053513.1-201ENST00000543604 NPDC1Q9NQX5 325 aaPredicted RBP12.19□□□□□ -0.46
AC053513.1-201ENST00000543604 ADGRL3Q9HAR2 1447 aa12.19□□□□□ -0.46
AC053513.1-201ENST00000543604 THSD4Q6ZMP0 1018 aa12.18□□□□□ -0.46
AC053513.1-201ENST00000543604 PACS2Q86VP3 889 aa12.18□□□□□ -0.46
AC053513.1-201ENST00000543604 MYO5BQ9ULV0 1848 aa12.17□□□□□ -0.46
AC053513.1-201ENST00000543604 LAPTM4BQ86VI4 370 aa12.17□□□□□ -0.46
AC053513.1-201ENST00000543604 SETBP1Q9Y6X0 1596 aa12.17□□□□□ -0.46
AC053513.1-201ENST00000543604 SOS2Q07890 1332 aaPredicted RBP12.16□□□□□ -0.46
AC053513.1-201ENST00000543604 C3orf80F5H4A9 247 aa12.16□□□□□ -0.46
AC053513.1-201ENST00000543604 SMAPO00193 183 aa12.16□□□□□ -0.46
AC053513.1-201ENST00000543604 UNC13BO14795 1591 aa12.16□□□□□ -0.46
AC053513.1-201ENST00000543604 C1orf167Q5SNV9 1468 aa12.15□□□□□ -0.46
AC053513.1-201ENST00000543604 PTCH1Q13635 1447 aa12.15□□□□□ -0.46
AC053513.1-201ENST00000543604 ZFRQ96KR1 1074 aaKnown RBP12.15□□□□□ -0.46
AC053513.1-201ENST00000543604 NHSL1Q5SYE7 1610 aa12.15□□□□□ -0.47
AC053513.1-201ENST00000543604 TESPA1A2RU30 521 aaPredicted RBP12.14□□□□□ -0.47
AC053513.1-201ENST00000543604 ORAI2Q96SN7 254 aa12.14□□□□□ -0.47
AC053513.1-201ENST00000543604 XRN1Q8IZH2 1706 aaKnown RBP12.14□□□□□ -0.47
AC053513.1-201ENST00000543604 E9PCH4 1651 aa12.13□□□□□ -0.47
AC053513.1-201ENST00000543604 FAM98CQ17RN3 349 aaKnown RBP12.13□□□□□ -0.47
AC053513.1-201ENST00000543604 PADI6Q6TGC4 694 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms