RNA–Protein interactions for RNA: ENST00000543354.5

RPS6KC1-206, Transcript of ribosomal protein S6 kinase C1, humanhuman

TSL 1 (best) BASIC

Gene RPS6KC1, Length 4,082 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS6KC1-206ENST00000543354 GPRASP1Q5JY77 1395 aa16.54■□□□□ 0.24
RPS6KC1-206ENST00000543354 TEX35Q5T0J7 233 aa16.54■□□□□ 0.24
RPS6KC1-206ENST00000543354 PLEKHH1Q9ULM0 1364 aa16.53■□□□□ 0.24
RPS6KC1-206ENST00000543354 WASHC4Q2M389 1173 aa16.53■□□□□ 0.24
RPS6KC1-206ENST00000543354 SRGAP3O43295 1099 aa16.53■□□□□ 0.24
RPS6KC1-206ENST00000543354 JAKMIP1Q96N16 626 aaKnown RBP16.53■□□□□ 0.24
RPS6KC1-206ENST00000543354 PDCL3Q9H2J4 239 aa16.53■□□□□ 0.24
RPS6KC1-206ENST00000543354 TOPBP1Q92547 1522 aa16.53■□□□□ 0.24
RPS6KC1-206ENST00000543354 CCDC30Q5VVM6 783 aa16.53■□□□□ 0.24
RPS6KC1-206ENST00000543354 CYP46A1Q9Y6A2 500 aa16.52■□□□□ 0.24
RPS6KC1-206ENST00000543354 ADGRF5Q8IZF2 1346 aa16.52■□□□□ 0.24
RPS6KC1-206ENST00000543354 TRHP20396 242 aaPredicted RBP16.52■□□□□ 0.24
RPS6KC1-206ENST00000543354 SCAPERQ9BY12 1400 aa16.52■□□□□ 0.24
RPS6KC1-206ENST00000543354 ERICH4A6NGS2 130 aa16.52■□□□□ 0.23
RPS6KC1-206ENST00000543354 KRT85P78386 507 aa16.52■□□□□ 0.23
RPS6KC1-206ENST00000543354 PDCL2Q8N4E4 241 aa16.52■□□□□ 0.23
RPS6KC1-206ENST00000543354 PDCP20941 246 aa16.51■□□□□ 0.23
RPS6KC1-206ENST00000543354 TRIM29Q14134 588 aa16.51■□□□□ 0.23
RPS6KC1-206ENST00000543354 TSR1Q2NL82 804 aaKnown RBP16.51■□□□□ 0.23
RPS6KC1-206ENST00000543354 CCDC83Q8IWF9 413 aa16.51■□□□□ 0.23
RPS6KC1-206ENST00000543354 AKAP17AQ02040 695 aaKnown RBP16.51■□□□□ 0.23
RPS6KC1-206ENST00000543354 GPS2Q13227 327 aa16.51■□□□□ 0.23
RPS6KC1-206ENST00000543354 DDX11Q96FC9 970 aa16.51■□□□□ 0.23
RPS6KC1-206ENST00000543354 FCHSD2O94868 740 aa16.5■□□□□ 0.23
RPS6KC1-206ENST00000543354 TRDNQ13061 729 aa16.5■□□□□ 0.23
RPS6KC1-206ENST00000543354 NFXL1Q6ZNB6 911 aa16.5■□□□□ 0.23
RPS6KC1-206ENST00000543354 DDX58O95786 925 aaKnown RBP16.5■□□□□ 0.23
RPS6KC1-206ENST00000543354 RPAP2Q8IXW5 612 aaPredicted RBP16.5■□□□□ 0.23
RPS6KC1-206ENST00000543354 ARGLU1Q9NWB6 273 aaPredicted RBP16.5■□□□□ 0.23
RPS6KC1-206ENST00000543354 SPDYE4A6NLX3 237 aa16.5■□□□□ 0.23
RPS6KC1-206ENST00000543354 LETM1O95202 739 aaPredicted RBP16.5■□□□□ 0.23
RPS6KC1-206ENST00000543354 ME1P48163 572 aa16.5■□□□□ 0.23
RPS6KC1-206ENST00000543354 NFE2L2Q16236 605 aa16.5■□□□□ 0.23
RPS6KC1-206ENST00000543354 TTC5Q8N0Z6 440 aa16.5■□□□□ 0.23
RPS6KC1-206ENST00000543354 PSMA5P28066 241 aa16.5■□□□□ 0.23
RPS6KC1-206ENST00000543354 TPM1P09493 284 aa16.49■□□□□ 0.23
RPS6KC1-206ENST00000543354 CKAP2LQ8IYA6 745 aa16.49■□□□□ 0.23
RPS6KC1-206ENST00000543354 CASTP20810 708 aaKnown RBP16.49■□□□□ 0.23
RPS6KC1-206ENST00000543354 CYB5RLQ6IPT4 315 aa16.49■□□□□ 0.23
RPS6KC1-206ENST00000543354 RALYLQ86SE5 291 aaKnown RBP16.49■□□□□ 0.23
RPS6KC1-206ENST00000543354 PCMTD1Q96MG8 357 aaPredicted RBP16.49■□□□□ 0.23
RPS6KC1-206ENST00000543354 PODXL2Q9NZ53 605 aa16.49■□□□□ 0.23
RPS6KC1-206ENST00000543354 EMILIN1Q9Y6C2 1016 aa16.49■□□□□ 0.23
RPS6KC1-206ENST00000543354 DNMBPQ6XZF7 1577 aa16.48■□□□□ 0.23
RPS6KC1-206ENST00000543354 FAM83GA6ND36 823 aa16.48■□□□□ 0.23
RPS6KC1-206ENST00000543354 BMP2KLQ5H9B9 411 aa16.48■□□□□ 0.23
RPS6KC1-206ENST00000543354 TRERF1Q96PN7 1200 aa16.48■□□□□ 0.23
RPS6KC1-206ENST00000543354 PPFIA3O75145 1194 aa16.48■□□□□ 0.23
RPS6KC1-206ENST00000543354 KLHL40Q2TBA0 621 aa16.48■□□□□ 0.23
RPS6KC1-206ENST00000543354 GAS2L2Q8NHY3 880 aa16.48■□□□□ 0.23
RPS6KC1-206ENST00000543354 NUP62CLQ9H1M0 184 aa16.48■□□□□ 0.23
RPS6KC1-206ENST00000543354 DMRT2Q9Y5R5 561 aa16.48■□□□□ 0.23
RPS6KC1-206ENST00000543354 ARHGEF11O15085 1522 aa16.48■□□□□ 0.23
RPS6KC1-206ENST00000543354 HCLS1P14317 486 aaPredicted RBP16.47■□□□□ 0.23
RPS6KC1-206ENST00000543354 BRPF1P55201 1214 aaPredicted RBP16.47■□□□□ 0.23
RPS6KC1-206ENST00000543354 SPATA32Q96LK8 384 aa16.47■□□□□ 0.23
RPS6KC1-206ENST00000543354 C16orf71Q8IYS4 520 aaPredicted RBP16.47■□□□□ 0.23
RPS6KC1-206ENST00000543354 C16orf45Q96MC5 204 aaPredicted RBP16.47■□□□□ 0.23
RPS6KC1-206ENST00000543354 ZSCAN23Q3MJ62 389 aa16.47■□□□□ 0.23
RPS6KC1-206ENST00000543354 TFIP11Q9UBB9 837 aaKnown RBP16.47■□□□□ 0.23
RPS6KC1-206ENST00000543354 PER1O15534 1290 aaPredicted RBP16.46■□□□□ 0.23
RPS6KC1-206ENST00000543354 CCT4P50991 539 aaKnown RBP16.46■□□□□ 0.23
RPS6KC1-206ENST00000543354 WAPLQ7Z5K2 1190 aa16.46■□□□□ 0.23
RPS6KC1-206ENST00000543354 SRCIN1Q9C0H9 1055 aa16.46■□□□□ 0.23
RPS6KC1-206ENST00000543354 NAT10Q9H0A0 1025 aaKnown RBP16.46■□□□□ 0.23
RPS6KC1-206ENST00000543354 IGSF3O75054 1194 aa16.46■□□□□ 0.23
RPS6KC1-206ENST00000543354 STK38Q15208 465 aa16.46■□□□□ 0.23
RPS6KC1-206ENST00000543354 NCBP3Q53F19 620 aaKnown RBP16.46■□□□□ 0.23
RPS6KC1-206ENST00000543354 GRIN2BQ13224 1484 aa16.45■□□□□ 0.22
RPS6KC1-206ENST00000543354 PRIM1P49642 420 aaKnown RBP16.45■□□□□ 0.22
RPS6KC1-206ENST00000543354 PSME1Q06323 249 aa16.45■□□□□ 0.22
RPS6KC1-206ENST00000543354 BLOC1S2Q6QNY1 142 aa16.45■□□□□ 0.22
RPS6KC1-206ENST00000543354 PDRG1Q9NUG6 133 aa16.45■□□□□ 0.22
RPS6KC1-206ENST00000543354 GTF2E1P29083 439 aaPredicted RBP16.45■□□□□ 0.22
RPS6KC1-206ENST00000543354 IPO7O95373 1038 aaKnown RBP16.45■□□□□ 0.22
RPS6KC1-206ENST00000543354 MX1P20591 662 aa16.45■□□□□ 0.22
RPS6KC1-206ENST00000543354 SPG7Q9UQ90 795 aa16.45■□□□□ 0.22
RPS6KC1-206ENST00000543354 FAM177BA6PVY3 158 aa16.44■□□□□ 0.22
RPS6KC1-206ENST00000543354 PATL2C9JE40 543 aaKnown RBP16.44■□□□□ 0.22
RPS6KC1-206ENST00000543354 PLB1Q6P1J6 1458 aa16.44■□□□□ 0.22
RPS6KC1-206ENST00000543354 TESK2Q96S53 571 aa16.44■□□□□ 0.22
RPS6KC1-206ENST00000543354 TTC12Q9H892 705 aaPredicted RBP16.44■□□□□ 0.22
RPS6KC1-206ENST00000543354 TRMT1Q9NXH9 659 aaKnown RBP16.44■□□□□ 0.22
RPS6KC1-206ENST00000543354 HSP90B2PQ58FF3 399 aa16.44■□□□□ 0.22
RPS6KC1-206ENST00000543354 PRPF40BQ6NWY9 871 aaKnown RBP16.44■□□□□ 0.22
RPS6KC1-206ENST00000543354 RAPGEF3O95398 923 aa16.43■□□□□ 0.22
RPS6KC1-206ENST00000543354 AACSQ86V21 672 aa16.43■□□□□ 0.22
RPS6KC1-206ENST00000543354 PARD3Q8TEW0 1356 aa16.43■□□□□ 0.22
RPS6KC1-206ENST00000543354 MARCH6O60337 910 aa16.43■□□□□ 0.22
RPS6KC1-206ENST00000543354 ADCY5O95622 1261 aa16.43■□□□□ 0.22
RPS6KC1-206ENST00000543354 ABTB2Q8N961 1025 aa16.43■□□□□ 0.22
RPS6KC1-206ENST00000543354 MAP3K11Q16584 847 aa16.43■□□□□ 0.22
RPS6KC1-206ENST00000543354 ZGPATQ8N5A5 531 aaKnown RBP16.42■□□□□ 0.22
RPS6KC1-206ENST00000543354 LAMC3Q9Y6N6 1575 aa16.42■□□□□ 0.22
RPS6KC1-206ENST00000543354 CCDC66A2RUB6 948 aa16.42■□□□□ 0.22
RPS6KC1-206ENST00000543354 DTNBO60941 627 aa16.42■□□□□ 0.22
RPS6KC1-206ENST00000543354 SERPINC1P01008 464 aa16.42■□□□□ 0.22
RPS6KC1-206ENST00000543354 NME9Q86XW9 330 aa16.42■□□□□ 0.22
RPS6KC1-206ENST00000543354 NLRP2Q9NX02 1062 aa16.42■□□□□ 0.22
RPS6KC1-206ENST00000543354 GIMAP6Q6P9H5 292 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms