RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 FAM98CQ17RN3 349 aaKnown RBP13.63□□□□□ -0.23
TNFRSF1A-214ENST00000543048 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.63□□□□□ -0.23
TNFRSF1A-214ENST00000543048 CD163L1Q9NR16 1453 aa13.62□□□□□ -0.23
TNFRSF1A-214ENST00000543048 ZBTB7CA1YPR0 619 aa13.62□□□□□ -0.23
TNFRSF1A-214ENST00000543048 CDCA8Q53HL2 280 aa13.62□□□□□ -0.23
TNFRSF1A-214ENST00000543048 CCDC125Q86Z20 511 aa13.62□□□□□ -0.23
TNFRSF1A-214ENST00000543048 RGPD5Q99666 1765 aa13.62□□□□□ -0.23
TNFRSF1A-214ENST00000543048 CAMTA1Q9Y6Y1 1673 aa13.62□□□□□ -0.23
TNFRSF1A-214ENST00000543048 SPATA31A1Q5TZJ5 1347 aa13.62□□□□□ -0.23
TNFRSF1A-214ENST00000543048 SLIT3O75094 1523 aa13.61□□□□□ -0.23
TNFRSF1A-214ENST00000543048 A0A0G2JS52 829 aa13.61□□□□□ -0.23
TNFRSF1A-214ENST00000543048 MYT1Q01538 1121 aa13.61□□□□□ -0.23
TNFRSF1A-214ENST00000543048 KRT27Q7Z3Y8 459 aa13.61□□□□□ -0.23
TNFRSF1A-214ENST00000543048 RBM42Q9BTD8 480 aaKnown RBP13.61□□□□□ -0.23
TNFRSF1A-214ENST00000543048 NINLQ9Y2I6 1382 aa13.6□□□□□ -0.23
TNFRSF1A-214ENST00000543048 LMO7Q8WWI1 1683 aa13.6□□□□□ -0.23
TNFRSF1A-214ENST00000543048 LARP1Q6PKG0 1096 aaKnown RBP13.6□□□□□ -0.23
TNFRSF1A-214ENST00000543048 ZRANB1Q9UGI0 708 aa13.6□□□□□ -0.23
TNFRSF1A-214ENST00000543048 COL18A1P39060 1754 aa13.6□□□□□ -0.23
TNFRSF1A-214ENST00000543048 EP400Q96L91 3159 aa13.6□□□□□ -0.23
TNFRSF1A-214ENST00000543048 AATKQ6ZMQ8 1374 aa13.59□□□□□ -0.23
TNFRSF1A-214ENST00000543048 USP31Q70CQ4 1352 aa13.59□□□□□ -0.23
TNFRSF1A-214ENST00000543048 SOX12O15370 315 aa13.59□□□□□ -0.23
TNFRSF1A-214ENST00000543048 ARHGEF25Q86VW2 580 aa13.59□□□□□ -0.23
TNFRSF1A-214ENST00000543048 NME9Q86XW9 330 aa13.59□□□□□ -0.23
TNFRSF1A-214ENST00000543048 USP35Q9P2H5 1018 aa13.59□□□□□ -0.23
TNFRSF1A-214ENST00000543048 EDC4Q6P2E9 1401 aaKnown RBP13.58□□□□□ -0.24
TNFRSF1A-214ENST00000543048 A0A1W2PP64 1363 aa13.58□□□□□ -0.24
TNFRSF1A-214ENST00000543048 BARGINQ6ZT62 677 aa13.57□□□□□ -0.24
TNFRSF1A-214ENST00000543048 TCP11L2Q8N4U5 519 aa13.57□□□□□ -0.24
TNFRSF1A-214ENST00000543048 AXIN2Q9Y2T1 843 aa13.57□□□□□ -0.24
TNFRSF1A-214ENST00000543048 THRAP3Q9Y2W1 955 aaKnown RBP13.57□□□□□ -0.24
TNFRSF1A-214ENST00000543048 USP54Q70EL1 1684 aa13.56□□□□□ -0.24
TNFRSF1A-214ENST00000543048 COL5A2P05997 1499 aaPredicted RBP13.55□□□□□ -0.24
TNFRSF1A-214ENST00000543048 EIF4G2P78344 907 aaKnown RBP eCLIP13.55□□□□□ -0.24
TNFRSF1A-214ENST00000543048 THSD7AQ9UPZ6 1657 aa13.55□□□□□ -0.24
TNFRSF1A-214ENST00000543048 ANKRD36BQ8N2N9 1353 aa13.55□□□□□ -0.24
TNFRSF1A-214ENST00000543048 LTN1O94822 1766 aa13.55□□□□□ -0.24
TNFRSF1A-214ENST00000543048 NFAT5O94916 1531 aa13.54□□□□□ -0.24
TNFRSF1A-214ENST00000543048 SF3B2Q13435 895 aaKnown RBP13.54□□□□□ -0.24
TNFRSF1A-214ENST00000543048 TOM1L2Q6ZVM7 507 aa13.54□□□□□ -0.24
TNFRSF1A-214ENST00000543048 CRB1P82279 1406 aa13.54□□□□□ -0.24
TNFRSF1A-214ENST00000543048 PDE3BQ13370 1112 aa13.53□□□□□ -0.24
TNFRSF1A-214ENST00000543048 COG3Q96JB2 828 aa13.53□□□□□ -0.24
TNFRSF1A-214ENST00000543048 WDR17Q8IZU2 1322 aa13.53□□□□□ -0.24
TNFRSF1A-214ENST00000543048 CSB-PGBD3P0DP91 1061 aa13.52□□□□□ -0.25
TNFRSF1A-214ENST00000543048 HSPA5P11021 654 aaKnown RBP13.52□□□□□ -0.25
TNFRSF1A-214ENST00000543048 FAM182BQ5T319 152 aa13.52□□□□□ -0.25
TNFRSF1A-214ENST00000543048 BLMP54132 1417 aaPredicted RBP13.52□□□□□ -0.25
TNFRSF1A-214ENST00000543048 FYB1O15117 783 aa13.51□□□□□ -0.25
TNFRSF1A-214ENST00000543048 FAM196AQ6ZSG2 479 aa13.51□□□□□ -0.25
TNFRSF1A-214ENST00000543048 CARD10Q9BWT7 1032 aa13.51□□□□□ -0.25
TNFRSF1A-214ENST00000543048 KAT6BQ8WYB5 2073 aa13.51□□□□□ -0.25
TNFRSF1A-214ENST00000543048 ABCC6O95255 1503 aa13.49□□□□□ -0.25
TNFRSF1A-214ENST00000543048 OVOS2A0A0J9YW53 1432 aa13.49□□□□□ -0.25
TNFRSF1A-214ENST00000543048 OVOS2Q6IE36 1432 aa13.49□□□□□ -0.25
TNFRSF1A-214ENST00000543048 IP6K1Q92551 441 aa13.49□□□□□ -0.25
TNFRSF1A-214ENST00000543048 POLR3GLQ9BT43 218 aa13.49□□□□□ -0.25
TNFRSF1A-214ENST00000543048 CDCA7Q9BWT1 371 aaPredicted RBP13.49□□□□□ -0.25
TNFRSF1A-214ENST00000543048 PARP4Q9UKK3 1724 aaKnown RBP13.49□□□□□ -0.25
TNFRSF1A-214ENST00000543048 KIF20BQ96Q89 1820 aa13.48□□□□□ -0.25
TNFRSF1A-214ENST00000543048 RGPD1P0DJD0 1748 aa13.48□□□□□ -0.25
TNFRSF1A-214ENST00000543048 MYOM1P52179 1685 aa13.48□□□□□ -0.25
TNFRSF1A-214ENST00000543048 DEFB132Q7Z7B7 95 aa13.48□□□□□ -0.25
TNFRSF1A-214ENST00000543048 CARD14Q9BXL6 1004 aa13.48□□□□□ -0.25
TNFRSF1A-214ENST00000543048 GGNBP2Q9H3C7 697 aa13.48□□□□□ -0.25
TNFRSF1A-214ENST00000543048 C11orf95C9JLR9 678 aaPredicted RBP13.47□□□□□ -0.25
TNFRSF1A-214ENST00000543048 FBLN1P23142 703 aa13.47□□□□□ -0.25
TNFRSF1A-214ENST00000543048 DDB1Q16531 1140 aa13.47□□□□□ -0.25
TNFRSF1A-214ENST00000543048 WNK3Q9BYP7 1800 aa13.47□□□□□ -0.25
TNFRSF1A-214ENST00000543048 BAG6P46379 1132 aa13.46□□□□□ -0.25
TNFRSF1A-214ENST00000543048 AMPHP49418 695 aa13.46□□□□□ -0.25
TNFRSF1A-214ENST00000543048 ANKRD24Q8TF21 1146 aa13.46□□□□□ -0.25
TNFRSF1A-214ENST00000543048 NLRP2Q9NX02 1062 aa13.46□□□□□ -0.25
TNFRSF1A-214ENST00000543048 MAP2P11137 1827 aaKnown RBP13.46□□□□□ -0.26
TNFRSF1A-214ENST00000543048 SBF2Q86WG5 1849 aa13.46□□□□□ -0.26
TNFRSF1A-214ENST00000543048 CCDC7Q96M83 1385 aa13.45□□□□□ -0.26
TNFRSF1A-214ENST00000543048 ERBB3P21860 1342 aa13.45□□□□□ -0.26
TNFRSF1A-214ENST00000543048 EXOC5O00471 708 aa13.45□□□□□ -0.26
TNFRSF1A-214ENST00000543048 TRIM37O94972 964 aa13.45□□□□□ -0.26
TNFRSF1A-214ENST00000543048 MAP3K19Q56UN5 1328 aa13.44□□□□□ -0.26
TNFRSF1A-214ENST00000543048 LTV1Q96GA3 475 aaPredicted RBP13.44□□□□□ -0.26
TNFRSF1A-214ENST00000543048 RGPD2P0DJD1 1756 aa13.43□□□□□ -0.26
TNFRSF1A-214ENST00000543048 SPDYE2BA6NHP3 402 aa13.43□□□□□ -0.26
TNFRSF1A-214ENST00000543048 SPDYE6P0CI01 402 aa13.43□□□□□ -0.26
TNFRSF1A-214ENST00000543048 HOXC9P31274 260 aa13.43□□□□□ -0.26
TNFRSF1A-214ENST00000543048 EN1Q05925 392 aaPredicted RBP13.43□□□□□ -0.26
TNFRSF1A-214ENST00000543048 SPDYE2Q495Y8 402 aa13.43□□□□□ -0.26
TNFRSF1A-214ENST00000543048 NSD3Q9BZ95 1437 aa13.43□□□□□ -0.26
TNFRSF1A-214ENST00000543048 TNS1Q9HBL0 1735 aaKnown RBP13.42□□□□□ -0.26
TNFRSF1A-214ENST00000543048 APBA3O96018 575 aa13.42□□□□□ -0.26
TNFRSF1A-214ENST00000543048 RRS1Q15050 365 aaKnown RBP13.42□□□□□ -0.26
TNFRSF1A-214ENST00000543048 MARCH10Q8NA82 808 aaPredicted RBP13.42□□□□□ -0.26
TNFRSF1A-214ENST00000543048 PANK3Q9H999 370 aa13.42□□□□□ -0.26
TNFRSF1A-214ENST00000543048 CGNL1Q0VF96 1302 aa13.41□□□□□ -0.26
TNFRSF1A-214ENST00000543048 FAM208AQ9UK61 1670 aaKnown RBP13.41□□□□□ -0.26
TNFRSF1A-214ENST00000543048 IL2RBP14784 551 aa13.41□□□□□ -0.26
TNFRSF1A-214ENST00000543048 LRRC37A3O60309 1634 aa13.41□□□□□ -0.26
TNFRSF1A-214ENST00000543048 DISP2A7MBM2 1401 aa13.4□□□□□ -0.26
TNFRSF1A-214ENST00000543048 PEAK1Q9H792 1746 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms