RNA–Protein interactions for RNA: ENST00000542018.5

RAP1B-227, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 4

Gene RAP1B, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-227ENST00000542018 NINLQ9Y2I6 1382 aa27.41■■□□□ 1.98
RAP1B-227ENST00000542018 PROM2Q8N271 834 aa27.41■■□□□ 1.98
RAP1B-227ENST00000542018 PDGFDQ9GZP0 370 aaPredicted RBP27.41■■□□□ 1.98
RAP1B-227ENST00000542018 PPP1R1BQ9UD71 204 aaPredicted RBP27.4■■□□□ 1.98
RAP1B-227ENST00000542018 RGPD5Q99666 1765 aa27.4■■□□□ 1.98
RAP1B-227ENST00000542018 DDB1Q16531 1140 aa27.39■■□□□ 1.98
RAP1B-227ENST00000542018 MARCH10Q8NA82 808 aaPredicted RBP27.39■■□□□ 1.98
RAP1B-227ENST00000542018 BCL11BQ9C0K0 894 aaPredicted RBP27.38■■□□□ 1.97
RAP1B-227ENST00000542018 TOM1L2Q6ZVM7 507 aa27.37■■□□□ 1.97
RAP1B-227ENST00000542018 BCL9O00512 1426 aa27.36■■□□□ 1.97
RAP1B-227ENST00000542018 AKAP12Q02952 1782 aa27.36■■□□□ 1.97
RAP1B-227ENST00000542018 WDR17Q8IZU2 1322 aa27.36■■□□□ 1.97
RAP1B-227ENST00000542018 UTRNP46939 3433 aa27.35■■□□□ 1.97
RAP1B-227ENST00000542018 CPSF1Q10570 1443 aaKnown RBP27.34■■□□□ 1.97
RAP1B-227ENST00000542018 ARHGEF25Q86VW2 580 aa27.33■■□□□ 1.97
RAP1B-227ENST00000542018 MYOM1P52179 1685 aa27.31■■□□□ 1.96
RAP1B-227ENST00000542018 PTGER2P43116 358 aa27.29■■□□□ 1.96
RAP1B-227ENST00000542018 NFAT5O94916 1531 aa27.28■■□□□ 1.96
RAP1B-227ENST00000542018 TTC21BQ7Z4L5 1316 aa27.28■■□□□ 1.96
RAP1B-227ENST00000542018 ZBTB7AO95365 584 aa27.28■■□□□ 1.96
RAP1B-227ENST00000542018 TRPM1Q7Z4N2 1603 aa27.27■■□□□ 1.96
RAP1B-227ENST00000542018 CDCA7Q9BWT1 371 aaPredicted RBP27.27■■□□□ 1.96
RAP1B-227ENST00000542018 CARD10Q9BWT7 1032 aa27.27■■□□□ 1.96
RAP1B-227ENST00000542018 EVC2Q86UK5 1308 aa27.25■■□□□ 1.95
RAP1B-227ENST00000542018 TXNRD1Q16881 649 aa27.25■■□□□ 1.95
RAP1B-227ENST00000542018 SOX12O15370 315 aa27.23■■□□□ 1.95
RAP1B-227ENST00000542018 L3MBTL2Q969R5 705 aa27.23■■□□□ 1.95
RAP1B-227ENST00000542018 KCNH5Q8NCM2 988 aa27.22■■□□□ 1.95
RAP1B-227ENST00000542018 ATF5Q9Y2D1 282 aaPredicted RBP27.22■■□□□ 1.95
RAP1B-227ENST00000542018 DCAF8L1A6NGE4 600 aa27.21■■□□□ 1.95
RAP1B-227ENST00000542018 ZNF692Q9BU19 519 aaPredicted RBP27.21■■□□□ 1.95
RAP1B-227ENST00000542018 SLC15A2Q16348 729 aa27.2■■□□□ 1.94
RAP1B-227ENST00000542018 TTC21AQ8NDW8 1320 aa27.19■■□□□ 1.94
RAP1B-227ENST00000542018 TNS2Q63HR2 1409 aa27.19■■□□□ 1.94
RAP1B-227ENST00000542018 EXOC5O00471 708 aa27.19■■□□□ 1.94
RAP1B-227ENST00000542018 CSB-PGBD3P0DP91 1061 aa27.19■■□□□ 1.94
RAP1B-227ENST00000542018 SGIP1Q9BQI5 828 aa27.19■■□□□ 1.94
RAP1B-227ENST00000542018 NHSQ6T4R5 1651 aa27.19■■□□□ 1.94
RAP1B-227ENST00000542018 ABCC6O95255 1503 aa27.17■■□□□ 1.94
RAP1B-227ENST00000542018 MON2Q7Z3U7 1717 aa27.17■■□□□ 1.94
RAP1B-227ENST00000542018 STK32BQ9NY57 414 aa27.17■■□□□ 1.94
RAP1B-227ENST00000542018 CCDC7Q96M83 1385 aa27.17■■□□□ 1.94
RAP1B-227ENST00000542018 PAPPAQ13219 1627 aa27.16■■□□□ 1.94
RAP1B-227ENST00000542018 FHDC1Q9C0D6 1143 aaPredicted RBP27.16■■□□□ 1.94
RAP1B-227ENST00000542018 SYT17Q9BSW7 474 aa27.15■■□□□ 1.94
RAP1B-227ENST00000542018 USP54Q70EL1 1684 aa27.14■■□□□ 1.93
RAP1B-227ENST00000542018 KTN1Q86UP2 1357 aaKnown RBP27.13■■□□□ 1.93
RAP1B-227ENST00000542018 ZNF784Q8NCA9 323 aaPredicted RBP27.13■■□□□ 1.93
RAP1B-227ENST00000542018 MTFR1LQ9H019 292 aa27.12■■□□□ 1.93
RAP1B-227ENST00000542018 ACSBG1Q96GR2 724 aa27.11■■□□□ 1.93
RAP1B-227ENST00000542018 SIN3AQ96ST3 1273 aa27.11■■□□□ 1.93
RAP1B-227ENST00000542018 BTAF1O14981 1849 aa27.11■■□□□ 1.93
RAP1B-227ENST00000542018 USP31Q70CQ4 1352 aa27.1■■□□□ 1.93
RAP1B-227ENST00000542018 LTN1O94822 1766 aa27.1■■□□□ 1.93
RAP1B-227ENST00000542018 CD163L1Q9NR16 1453 aa27.1■■□□□ 1.93
RAP1B-227ENST00000542018 ERBB3P21860 1342 aa27.1■■□□□ 1.93
RAP1B-227ENST00000542018 ROCK2O75116 1388 aaKnown RBP27.09■■□□□ 1.93
RAP1B-227ENST00000542018 CHD4Q14839 1912 aa27.08■■□□□ 1.93
RAP1B-227ENST00000542018 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.07■■□□□ 1.92
RAP1B-227ENST00000542018 NME9Q86XW9 330 aa27.06■■□□□ 1.92
RAP1B-227ENST00000542018 SBNO2Q9Y2G9 1366 aa27.06■■□□□ 1.92
RAP1B-227ENST00000542018 ZNF827Q17R98 1081 aa27.05■■□□□ 1.92
RAP1B-227ENST00000542018 LRRC4BQ9NT99 713 aa27.05■■□□□ 1.92
RAP1B-227ENST00000542018 NLRP2Q9NX02 1062 aa27.04■■□□□ 1.92
RAP1B-227ENST00000542018 KAT6BQ8WYB5 2073 aa27.04■■□□□ 1.92
RAP1B-227ENST00000542018 IL2RBP14784 551 aa27.03■■□□□ 1.92
RAP1B-227ENST00000542018 GOLGB1Q14789 3259 aaKnown RBP27.02■■□□□ 1.92
RAP1B-227ENST00000542018 ARXQ96QS3 562 aa27.02■■□□□ 1.92
RAP1B-227ENST00000542018 MAP3K5Q99683 1374 aa27.01■■□□□ 1.91
RAP1B-227ENST00000542018 ANKRD24Q8TF21 1146 aa27■■□□□ 1.91
RAP1B-227ENST00000542018 COL24A1Q17RW2 1714 aa26.99■■□□□ 1.91
RAP1B-227ENST00000542018 QSER1Q2KHR3 1735 aa26.97■■□□□ 1.91
RAP1B-227ENST00000542018 AKT1S1Q96B36 256 aa26.97■■□□□ 1.91
RAP1B-227ENST00000542018 TUBGCP6Q96RT7 1819 aa26.96■■□□□ 1.91
RAP1B-227ENST00000542018 NEUROD1Q13562 356 aa26.96■■□□□ 1.91
RAP1B-227ENST00000542018 SLC12A5Q9H2X9 1139 aa26.96■■□□□ 1.91
RAP1B-227ENST00000542018 EDC4Q6P2E9 1401 aaKnown RBP26.92■■□□□ 1.9
RAP1B-227ENST00000542018 TMC1Q8TDI8 760 aa26.91■■□□□ 1.9
RAP1B-227ENST00000542018 PNPLA7Q6ZV29 1317 aa26.9■■□□□ 1.9
RAP1B-227ENST00000542018 A0A1W2PP64 1363 aa26.9■■□□□ 1.9
RAP1B-227ENST00000542018 KCNQ4P56696 695 aa26.89■■□□□ 1.9
RAP1B-227ENST00000542018 SHANK3Q9BYB0 1731 aa26.88■■□□□ 1.89
RAP1B-227ENST00000542018 C1QTNF8P60827 252 aa26.88■■□□□ 1.89
RAP1B-227ENST00000542018 SLC27A3Q5K4L6 730 aa26.88■■□□□ 1.89
RAP1B-227ENST00000542018 DDX54Q8TDD1 881 aaKnown RBP26.88■■□□□ 1.89
RAP1B-227ENST00000542018 IP6K1Q92551 441 aa26.88■■□□□ 1.89
RAP1B-227ENST00000542018 FAM208AQ9UK61 1670 aaKnown RBP26.88■■□□□ 1.89
RAP1B-227ENST00000542018 LY75O60449 1722 aa26.87■■□□□ 1.89
RAP1B-227ENST00000542018 NSD2O96028 1365 aa26.87■■□□□ 1.89
RAP1B-227ENST00000542018 HDGFL2Q7Z4V5 671 aaPredicted RBP26.87■■□□□ 1.89
RAP1B-227ENST00000542018 DOT1LQ8TEK3 1739 aa26.87■■□□□ 1.89
RAP1B-227ENST00000542018 RGPD2P0DJD1 1756 aa26.86■■□□□ 1.89
RAP1B-227ENST00000542018 SLC16A10Q8TF71 515 aa26.86■■□□□ 1.89
RAP1B-227ENST00000542018 CARD11Q9BXL7 1154 aa26.85■■□□□ 1.89
RAP1B-227ENST00000542018 GPR162Q16538 588 aa26.84■■□□□ 1.89
RAP1B-227ENST00000542018 LTV1Q96GA3 475 aaPredicted RBP26.84■■□□□ 1.89
RAP1B-227ENST00000542018 SENP3-EIF4A1A0A087X0R7 540 aa26.83■■□□□ 1.89
RAP1B-227ENST00000542018 PRIM1P49642 420 aaKnown RBP26.83■■□□□ 1.89
RAP1B-227ENST00000542018 FBLN1P23142 703 aa26.82■■□□□ 1.88
RAP1B-227ENST00000542018 NLGN2Q8NFZ4 835 aa26.82■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms