RNA–Protein interactions for RNA: ENST00000541297.6

CLPTM1-202, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2 BASIC

Gene CLPTM1, Length 2,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-202ENST00000541297 PLEKHG5O94827 1062 aa19.88■□□□□ 0.77
CLPTM1-202ENST00000541297 FCHSD2O94868 740 aa19.87■□□□□ 0.77
CLPTM1-202ENST00000541297 XIRP1Q702N8 1843 aaKnown RBP19.87■□□□□ 0.77
CLPTM1-202ENST00000541297 E9PSI1 815 aa19.86■□□□□ 0.77
CLPTM1-202ENST00000541297 TMPOP42166 694 aaKnown RBP19.86■□□□□ 0.77
CLPTM1-202ENST00000541297 EIF4A2Q14240 407 aaKnown RBP19.86■□□□□ 0.77
CLPTM1-202ENST00000541297 ZNF335Q9H4Z2 1342 aaPredicted RBP19.86■□□□□ 0.77
CLPTM1-202ENST00000541297 TRMT2AQ8IZ69 625 aaKnown RBP19.85■□□□□ 0.77
CLPTM1-202ENST00000541297 PHF23Q9BUL5 403 aaPredicted RBP19.85■□□□□ 0.77
CLPTM1-202ENST00000541297 PNNQ9H307 717 aaKnown RBP19.85■□□□□ 0.77
CLPTM1-202ENST00000541297 RRP1P56182 461 aaKnown RBP19.84■□□□□ 0.77
CLPTM1-202ENST00000541297 AMPHP49418 695 aa19.84■□□□□ 0.77
CLPTM1-202ENST00000541297 LMOD2Q6P5Q4 547 aa19.84■□□□□ 0.77
CLPTM1-202ENST00000541297 PHACTR3Q96KR7 559 aa19.84■□□□□ 0.77
CLPTM1-202ENST00000541297 USP54Q70EL1 1684 aa19.84■□□□□ 0.77
CLPTM1-202ENST00000541297 MST1RQ04912 1400 aa19.84■□□□□ 0.77
CLPTM1-202ENST00000541297 RIPK4P57078 832 aa19.83■□□□□ 0.76
CLPTM1-202ENST00000541297 CCDC27Q2M243 656 aa19.83■□□□□ 0.76
CLPTM1-202ENST00000541297 KIF1AQ12756 1690 aa19.82■□□□□ 0.76
CLPTM1-202ENST00000541297 NEFMP07197 916 aa19.82■□□□□ 0.76
CLPTM1-202ENST00000541297 DDX17Q92841 729 aaKnown RBP19.82■□□□□ 0.76
CLPTM1-202ENST00000541297 LTN1O94822 1766 aa19.82■□□□□ 0.76
CLPTM1-202ENST00000541297 AEBP1Q8IUX7 1158 aa19.82■□□□□ 0.76
CLPTM1-202ENST00000541297 TRIM35Q9UPQ4 493 aa19.82■□□□□ 0.76
CLPTM1-202ENST00000541297 SBNO1A3KN83 1393 aa19.81■□□□□ 0.76
CLPTM1-202ENST00000541297 FLT4P35916 1363 aa19.81■□□□□ 0.76
CLPTM1-202ENST00000541297 PLIN1O60240 522 aa19.81■□□□□ 0.76
CLPTM1-202ENST00000541297 MSH6P52701 1360 aa19.81■□□□□ 0.76
CLPTM1-202ENST00000541297 RTL5Q5HYW3 569 aaPredicted RBP19.81■□□□□ 0.76
CLPTM1-202ENST00000541297 KRT28Q7Z3Y7 464 aa19.81■□□□□ 0.76
CLPTM1-202ENST00000541297 WDR63Q8IWG1 891 aa19.81■□□□□ 0.76
CLPTM1-202ENST00000541297 NCOA3Q9Y6Q9 1424 aa19.8■□□□□ 0.76
CLPTM1-202ENST00000541297 SULT6B1Q6IMI4 303 aa19.8■□□□□ 0.76
CLPTM1-202ENST00000541297 CADPS2Q86UW7 1296 aa19.8■□□□□ 0.76
CLPTM1-202ENST00000541297 DCCP43146 1447 aa19.8■□□□□ 0.76
CLPTM1-202ENST00000541297 TRPM3Q9HCF6 1732 aaPredicted RBP19.79■□□□□ 0.76
CLPTM1-202ENST00000541297 ZBTB7CA1YPR0 619 aa19.79■□□□□ 0.76
CLPTM1-202ENST00000541297 ANO8Q9HCE9 1232 aaPredicted RBP19.78■□□□□ 0.76
CLPTM1-202ENST00000541297 DLG5Q8TDM6 1919 aa19.78■□□□□ 0.76
CLPTM1-202ENST00000541297 RGPD1P0DJD0 1748 aa19.77■□□□□ 0.76
CLPTM1-202ENST00000541297 HOXC9P31274 260 aa19.77■□□□□ 0.76
CLPTM1-202ENST00000541297 EXOC6Q8TAG9 804 aa19.77■□□□□ 0.76
CLPTM1-202ENST00000541297 NCBP3Q53F19 620 aaKnown RBP19.76■□□□□ 0.75
CLPTM1-202ENST00000541297 NPM2Q86SE8 214 aaKnown RBP19.76■□□□□ 0.75
CLPTM1-202ENST00000541297 LTV1Q96GA3 475 aaPredicted RBP19.76■□□□□ 0.75
CLPTM1-202ENST00000541297 NFE2L2Q16236 605 aa19.75■□□□□ 0.75
CLPTM1-202ENST00000541297 NFAT5O94916 1531 aa19.75■□□□□ 0.75
CLPTM1-202ENST00000541297 TSR2Q969E8 191 aaKnown RBP19.75■□□□□ 0.75
CLPTM1-202ENST00000541297 THUMPD2Q9BTF0 503 aaKnown RBP19.73■□□□□ 0.75
CLPTM1-202ENST00000541297 EYA1Q99502 592 aa19.73■□□□□ 0.75
CLPTM1-202ENST00000541297 MYH16Q9H6N6 1097 aa19.73■□□□□ 0.75
CLPTM1-202ENST00000541297 BCAR3O75815 825 aa19.72■□□□□ 0.75
CLPTM1-202ENST00000541297 GCP02774 474 aa19.72■□□□□ 0.75
CLPTM1-202ENST00000541297 KCNH5Q8NCM2 988 aa19.72■□□□□ 0.75
CLPTM1-202ENST00000541297 ALS2Q96Q42 1657 aa19.71■□□□□ 0.75
CLPTM1-202ENST00000541297 TCERG1O14776 1098 aaKnown RBP19.7■□□□□ 0.74
CLPTM1-202ENST00000541297 ARHGEF10O15013 1369 aa19.7■□□□□ 0.74
CLPTM1-202ENST00000541297 FAM83GA6ND36 823 aa19.7■□□□□ 0.74
CLPTM1-202ENST00000541297 C20orf194Q5TEA3 1177 aa19.7■□□□□ 0.74
CLPTM1-202ENST00000541297 LAS1LQ9Y4W2 734 aaKnown RBP19.7■□□□□ 0.74
CLPTM1-202ENST00000541297 KIF24Q5T7B8 1368 aa19.7■□□□□ 0.74
CLPTM1-202ENST00000541297 PDE4AP27815 886 aa19.69■□□□□ 0.74
CLPTM1-202ENST00000541297 NPHP3Q7Z494 1330 aa19.69■□□□□ 0.74
CLPTM1-202ENST00000541297 SLIT3O75094 1523 aa19.68■□□□□ 0.74
CLPTM1-202ENST00000541297 IGSF1Q8N6C5 1336 aa19.68■□□□□ 0.74
CLPTM1-202ENST00000541297 DCTN1Q14203 1278 aa19.68■□□□□ 0.74
CLPTM1-202ENST00000541297 BRINP3Q76B58 766 aa19.68■□□□□ 0.74
CLPTM1-202ENST00000541297 IP6K1Q92551 441 aa19.68■□□□□ 0.74
CLPTM1-202ENST00000541297 RTL1A6NKG5 1358 aa19.68■□□□□ 0.74
CLPTM1-202ENST00000541297 USHBP1Q8N6Y0 703 aa19.67■□□□□ 0.74
CLPTM1-202ENST00000541297 RGPD2P0DJD1 1756 aa19.67■□□□□ 0.74
CLPTM1-202ENST00000541297 SLAIN2Q9P270 581 aa19.67■□□□□ 0.74
CLPTM1-202ENST00000541297 USP19O94966 1318 aa19.66■□□□□ 0.74
CLPTM1-202ENST00000541297 EXOSC9Q06265 439 aaKnown RBP19.66■□□□□ 0.74
CLPTM1-202ENST00000541297 IL16Q14005 1332 aa19.66■□□□□ 0.74
CLPTM1-202ENST00000541297 BCL2L13Q9BXK5 485 aa19.66■□□□□ 0.74
CLPTM1-202ENST00000541297 MED1Q15648 1581 aaPredicted RBP19.65■□□□□ 0.74
CLPTM1-202ENST00000541297 BACH2Q9BYV9 841 aa19.65■□□□□ 0.74
CLPTM1-202ENST00000541297 KDRP35968 1356 aa19.65■□□□□ 0.74
CLPTM1-202ENST00000541297 ZC3H6P61129 1189 aaKnown RBP19.65■□□□□ 0.74
CLPTM1-202ENST00000541297 ARHGEF25Q86VW2 580 aa19.65■□□□□ 0.74
CLPTM1-202ENST00000541297 CABLES1Q8TDN4 633 aa19.65■□□□□ 0.74
CLPTM1-202ENST00000541297 CRBNQ96SW2 442 aa19.65■□□□□ 0.74
CLPTM1-202ENST00000541297 PXDNQ92626 1479 aa19.64■□□□□ 0.74
CLPTM1-202ENST00000541297 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.64■□□□□ 0.73
CLPTM1-202ENST00000541297 RGPD5Q99666 1765 aa19.64■□□□□ 0.73
CLPTM1-202ENST00000541297 PHRF1Q9P1Y6 1649 aaKnown RBP19.63■□□□□ 0.73
CLPTM1-202ENST00000541297 RARSP54136 660 aaKnown RBP19.63■□□□□ 0.73
CLPTM1-202ENST00000541297 LMOD3Q0VAK6 560 aa19.63■□□□□ 0.73
CLPTM1-202ENST00000541297 MTHFSDQ2M296 383 aaKnown RBP19.63■□□□□ 0.73
CLPTM1-202ENST00000541297 TNS3Q68CZ2 1445 aa19.63■□□□□ 0.73
CLPTM1-202ENST00000541297 MCM10Q7L590 875 aa19.62■□□□□ 0.73
CLPTM1-202ENST00000541297 LRRC59Q96AG4 307 aaKnown RBP19.62■□□□□ 0.73
CLPTM1-202ENST00000541297 NBPF6Q5VWK0 638 aa19.61■□□□□ 0.73
CLPTM1-202ENST00000541297 FRAT1Q92837 279 aaPredicted RBP19.61■□□□□ 0.73
CLPTM1-202ENST00000541297 NBPF4Q96M43 638 aa19.61■□□□□ 0.73
CLPTM1-202ENST00000541297 AXIN2Q9Y2T1 843 aa19.61■□□□□ 0.73
CLPTM1-202ENST00000541297 MS4A1P11836 297 aa19.6■□□□□ 0.73
CLPTM1-202ENST00000541297 CANXP27824 592 aaKnown RBP19.6■□□□□ 0.73
CLPTM1-202ENST00000541297 CALD1Q05682 793 aaKnown RBP19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms