RNA–Protein interactions for RNA: ENST00000541157.5

MRE11-210, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

TSL 4

Gene MRE11, Length 594 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-210ENST00000541157 ATN1P54259 1190 aaPredicted RBP13.48□□□□□ -0.25
MRE11-210ENST00000541157 C19orf44Q9H6X5 657 aa13.48□□□□□ -0.25
MRE11-210ENST00000541157 TAOK2Q9UL54 1235 aa13.48□□□□□ -0.25
MRE11-210ENST00000541157 SSH2Q76I76 1423 aa13.47□□□□□ -0.25
MRE11-210ENST00000541157 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.47□□□□□ -0.25
MRE11-210ENST00000541157 ZFP91Q96JP5 570 aaPredicted RBP13.47□□□□□ -0.25
MRE11-210ENST00000541157 GGNBP2Q9H3C7 697 aa13.47□□□□□ -0.25
MRE11-210ENST00000541157 LRRC7Q96NW7 1537 aa13.46□□□□□ -0.25
MRE11-210ENST00000541157 CENPBP07199 599 aaPredicted RBP13.46□□□□□ -0.25
MRE11-210ENST00000541157 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.46□□□□□ -0.25
MRE11-210ENST00000541157 FAM9BQ8IZU0 186 aa13.46□□□□□ -0.25
MRE11-210ENST00000541157 ZNF335Q9H4Z2 1342 aaPredicted RBP13.45□□□□□ -0.26
MRE11-210ENST00000541157 PMFBP1Q8TBY8 1022 aa13.45□□□□□ -0.26
MRE11-210ENST00000541157 TRIM35Q9UPQ4 493 aa13.45□□□□□ -0.26
MRE11-210ENST00000541157 XIRP1Q702N8 1843 aaKnown RBP13.45□□□□□ -0.26
MRE11-210ENST00000541157 TTC21BQ7Z4L5 1316 aa13.44□□□□□ -0.26
MRE11-210ENST00000541157 NME9Q86XW9 330 aa13.44□□□□□ -0.26
MRE11-210ENST00000541157 PELP1Q8IZL8 1130 aaKnown RBP13.44□□□□□ -0.26
MRE11-210ENST00000541157 NGDNQ8NEJ9 315 aaKnown RBP13.44□□□□□ -0.26
MRE11-210ENST00000541157 PHF8Q9UPP1 1060 aa13.44□□□□□ -0.26
MRE11-210ENST00000541157 INSRP06213 1382 aa13.44□□□□□ -0.26
MRE11-210ENST00000541157 KIF1AQ12756 1690 aa13.44□□□□□ -0.26
MRE11-210ENST00000541157 TTC21AQ8NDW8 1320 aa13.43□□□□□ -0.26
MRE11-210ENST00000541157 C1orf167Q5SNV9 1468 aa13.43□□□□□ -0.26
MRE11-210ENST00000541157 TNNT2P45379 298 aaPredicted RBP13.43□□□□□ -0.26
MRE11-210ENST00000541157 MST1RQ04912 1400 aa13.43□□□□□ -0.26
MRE11-210ENST00000541157 MSH6P52701 1360 aa13.43□□□□□ -0.26
MRE11-210ENST00000541157 OVOS2A0A0J9YW53 1432 aa13.42□□□□□ -0.26
MRE11-210ENST00000541157 OVOS2Q6IE36 1432 aa13.42□□□□□ -0.26
MRE11-210ENST00000541157 ATF3P18847 181 aa13.42□□□□□ -0.26
MRE11-210ENST00000541157 ESCO1Q5FWF5 840 aa13.41□□□□□ -0.26
MRE11-210ENST00000541157 USP54Q70EL1 1684 aa13.4□□□□□ -0.26
MRE11-210ENST00000541157 BLMP54132 1417 aaPredicted RBP13.4□□□□□ -0.26
MRE11-210ENST00000541157 MTHFSP49914 203 aa13.4□□□□□ -0.26
MRE11-210ENST00000541157 HNRNPUQ00839 825 aaKnown RBP eCLIP13.4□□□□□ -0.26
MRE11-210ENST00000541157 CADPS2Q86UW7 1296 aa13.4□□□□□ -0.26
MRE11-210ENST00000541157 COG3Q96JB2 828 aa13.4□□□□□ -0.26
MRE11-210ENST00000541157 AATKQ6ZMQ8 1374 aa13.4□□□□□ -0.26
MRE11-210ENST00000541157 USP31Q70CQ4 1352 aa13.4□□□□□ -0.26
MRE11-210ENST00000541157 PIK3C2AO00443 1686 aa13.4□□□□□ -0.26
MRE11-210ENST00000541157 SMG6Q86US8 1419 aaKnown RBP13.39□□□□□ -0.27
MRE11-210ENST00000541157 STK25O00506 426 aa13.39□□□□□ -0.27
MRE11-210ENST00000541157 CFAP53Q96M91 514 aa13.39□□□□□ -0.27
MRE11-210ENST00000541157 ORAI2Q96SN7 254 aa13.39□□□□□ -0.27
MRE11-210ENST00000541157 SHPRHQ149N8 1683 aa13.39□□□□□ -0.27
MRE11-210ENST00000541157 COL3A1P02461 1466 aaPredicted RBP13.38□□□□□ -0.27
MRE11-210ENST00000541157 BCL11BQ9C0K0 894 aaPredicted RBP13.38□□□□□ -0.27
MRE11-210ENST00000541157 GOLGA2Q08379 1002 aa13.37□□□□□ -0.27
MRE11-210ENST00000541157 WDR43Q15061 677 aaKnown RBP eCLIP13.37□□□□□ -0.27
MRE11-210ENST00000541157 STK24Q9Y6E0 443 aa13.37□□□□□ -0.27
MRE11-210ENST00000541157 CDK12Q9NYV4 1490 aaPredicted RBP13.36□□□□□ -0.27
MRE11-210ENST00000541157 PNPLA6Q8IY17 1366 aa13.36□□□□□ -0.27
MRE11-210ENST00000541157 ZBED9Q6R2W3 1325 aa13.36□□□□□ -0.27
MRE11-210ENST00000541157 TRPM3Q9HCF6 1732 aaPredicted RBP13.36□□□□□ -0.27
MRE11-210ENST00000541157 MARF1Q9Y4F3 1742 aaKnown RBP13.36□□□□□ -0.27
MRE11-210ENST00000541157 PSME1Q06323 249 aa13.35□□□□□ -0.27
MRE11-210ENST00000541157 SLC39A7Q92504 469 aa13.35□□□□□ -0.27
MRE11-210ENST00000541157 POLKQ9UBT6 870 aa13.35□□□□□ -0.27
MRE11-210ENST00000541157 ADAMTS8Q9UP79 889 aa13.35□□□□□ -0.27
MRE11-210ENST00000541157 LTBP4Q8N2S1 1624 aa13.35□□□□□ -0.27
MRE11-210ENST00000541157 FOXO3O43524 673 aa13.34□□□□□ -0.27
MRE11-210ENST00000541157 NLRP6P59044 892 aa13.32□□□□□ -0.28
MRE11-210ENST00000541157 MKRN3Q13064 507 aaKnown RBP13.32□□□□□ -0.28
MRE11-210ENST00000541157 ABTB2Q8N961 1025 aa13.32□□□□□ -0.28
MRE11-210ENST00000541157 METRNQ9UJH8 293 aa13.32□□□□□ -0.28
MRE11-210ENST00000541157 EMILIN1Q9Y6C2 1016 aa13.32□□□□□ -0.28
MRE11-210ENST00000541157 MAP2P11137 1827 aaKnown RBP13.32□□□□□ -0.28
MRE11-210ENST00000541157 C7P10643 843 aa13.31□□□□□ -0.28
MRE11-210ENST00000541157 FBLN1P23142 703 aa13.31□□□□□ -0.28
MRE11-210ENST00000541157 KRT28Q7Z3Y7 464 aa13.31□□□□□ -0.28
MRE11-210ENST00000541157 NPHP3Q7Z494 1330 aa13.31□□□□□ -0.28
MRE11-210ENST00000541157 PXDNQ92626 1479 aa13.3□□□□□ -0.28
MRE11-210ENST00000541157 XPCQ01831 940 aaPredicted RBP13.3□□□□□ -0.28
MRE11-210ENST00000541157 IER5LQ5T953 404 aa13.3□□□□□ -0.28
MRE11-210ENST00000541157 BRINP3Q76B58 766 aa13.3□□□□□ -0.28
MRE11-210ENST00000541157 HS6ST3Q8IZP7 471 aa13.3□□□□□ -0.28
MRE11-210ENST00000541157 SLAIN2Q9P270 581 aa13.3□□□□□ -0.28
MRE11-210ENST00000541157 NUDCQ9Y266 331 aa13.3□□□□□ -0.28
MRE11-210ENST00000541157 ALS2Q96Q42 1657 aa13.3□□□□□ -0.28
MRE11-210ENST00000541157 SBNO1A3KN83 1393 aa13.3□□□□□ -0.28
MRE11-210ENST00000541157 PEAK1Q9H792 1746 aa13.3□□□□□ -0.28
MRE11-210ENST00000541157 SLIT3O75094 1523 aa13.29□□□□□ -0.28
MRE11-210ENST00000541157 NFAT5O94916 1531 aa13.29□□□□□ -0.28
MRE11-210ENST00000541157 PPM1GO15355 546 aaPredicted RBP13.29□□□□□ -0.28
MRE11-210ENST00000541157 DIAPH1O60610 1272 aaKnown RBP13.29□□□□□ -0.28
MRE11-210ENST00000541157 RRS1Q15050 365 aaKnown RBP13.29□□□□□ -0.28
MRE11-210ENST00000541157 EFCAB3Q8N7B9 438 aa13.29□□□□□ -0.28
MRE11-210ENST00000541157 NUTM2GQ5VZR2 741 aa13.28□□□□□ -0.28
MRE11-210ENST00000541157 USP19O94966 1318 aa13.28□□□□□ -0.28
MRE11-210ENST00000541157 MAP3K19Q56UN5 1328 aa13.28□□□□□ -0.28
MRE11-210ENST00000541157 KIF24Q5T7B8 1368 aa13.28□□□□□ -0.28
MRE11-210ENST00000541157 U2AF1L5P0DN76 240 aaPredicted RBP13.27□□□□□ -0.29
MRE11-210ENST00000541157 U2AF1Q01081 240 aaKnown RBP eCLIP13.27□□□□□ -0.292e-8■■■■■ 32.6
MRE11-210ENST00000541157 TNS3Q68CZ2 1445 aa13.27□□□□□ -0.29
MRE11-210ENST00000541157 RTL1A6NKG5 1358 aa13.26□□□□□ -0.29
MRE11-210ENST00000541157 IL13P35225 146 aa13.26□□□□□ -0.29
MRE11-210ENST00000541157 FLT4P35916 1363 aa13.26□□□□□ -0.29
MRE11-210ENST00000541157 IQSEC2Q5JU85 1478 aa13.26□□□□□ -0.29
MRE11-210ENST00000541157 CCDC146Q8IYE0 955 aa13.26□□□□□ -0.29
MRE11-210ENST00000541157 NHSL1Q5SYE7 1610 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms