RNA–Protein interactions for RNA: ENST00000540537.5

CHFR-217, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 913 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-217ENST00000540537 A0A1W2PP64 1363 aa29.52■■■□□ 2.32
CHFR-217ENST00000540537 PARP4Q9UKK3 1724 aaKnown RBP29.52■■■□□ 2.32
CHFR-217ENST00000540537 FAM196AQ6ZSG2 479 aa29.52■■■□□ 2.32
CHFR-217ENST00000540537 ABCC6O95255 1503 aa29.51■■■□□ 2.32
CHFR-217ENST00000540537 SOX12O15370 315 aa29.51■■■□□ 2.31
CHFR-217ENST00000540537 AXIN2Q9Y2T1 843 aa29.51■■■□□ 2.31
CHFR-217ENST00000540537 USP47Q96K76 1375 aa29.51■■■□□ 2.31
CHFR-217ENST00000540537 PDE3BQ13370 1112 aa29.5■■■□□ 2.31
CHFR-217ENST00000540537 NME9Q86XW9 330 aa29.5■■■□□ 2.31
CHFR-217ENST00000540537 WDR17Q8IZU2 1322 aa29.49■■■□□ 2.31
CHFR-217ENST00000540537 TNS1Q9HBL0 1735 aaKnown RBP29.49■■■□□ 2.31
CHFR-217ENST00000540537 PCGF6Q9BYE7 350 aa29.49■■■□□ 2.31
CHFR-217ENST00000540537 RGPD5Q99666 1765 aa29.49■■■□□ 2.31
CHFR-217ENST00000540537 DISP2A7MBM2 1401 aa29.47■■■□□ 2.31
CHFR-217ENST00000540537 TOM1L2Q6ZVM7 507 aa29.47■■■□□ 2.31
CHFR-217ENST00000540537 WNK3Q9BYP7 1800 aa29.43■■■□□ 2.3
CHFR-217ENST00000540537 TMF1P82094 1093 aa29.43■■■□□ 2.3
CHFR-217ENST00000540537 OVOS2A0A0J9YW53 1432 aa29.43■■■□□ 2.3
CHFR-217ENST00000540537 OVOS2Q6IE36 1432 aa29.43■■■□□ 2.3
CHFR-217ENST00000540537 LRRC37A3O60309 1634 aa29.42■■■□□ 2.3
CHFR-217ENST00000540537 TRIM37O94972 964 aa29.41■■■□□ 2.3
CHFR-217ENST00000540537 EN1Q05925 392 aaPredicted RBP29.41■■■□□ 2.3
CHFR-217ENST00000540537 SRCAPQ6ZRS2 3230 aa29.41■■■□□ 2.3
CHFR-217ENST00000540537 LTN1O94822 1766 aa29.41■■■□□ 2.3
CHFR-217ENST00000540537 C11orf95C9JLR9 678 aaPredicted RBP29.4■■■□□ 2.3
CHFR-217ENST00000540537 CSB-PGBD3P0DP91 1061 aa29.4■■■□□ 2.3
CHFR-217ENST00000540537 CARD10Q9BWT7 1032 aa29.4■■■□□ 2.3
CHFR-217ENST00000540537 CDCA7Q9BWT1 371 aaPredicted RBP29.39■■■□□ 2.3
CHFR-217ENST00000540537 ANKRD36BQ8N2N9 1353 aa29.39■■■□□ 2.29
CHFR-217ENST00000540537 DDB1Q16531 1140 aa29.37■■■□□ 2.29
CHFR-217ENST00000540537 CDCA8Q53HL2 280 aa29.36■■■□□ 2.29
CHFR-217ENST00000540537 PEAK1Q9H792 1746 aa29.36■■■□□ 2.29
CHFR-217ENST00000540537 CCDC7Q96M83 1385 aa29.36■■■□□ 2.29
CHFR-217ENST00000540537 OVOS2A0A0G2JMS6 1433 aa29.36■■■□□ 2.29
CHFR-217ENST00000540537 ERBB3P21860 1342 aa29.34■■■□□ 2.29
CHFR-217ENST00000540537 APBA3O96018 575 aa29.33■■■□□ 2.29
CHFR-217ENST00000540537 CAMKK2Q96RR4 588 aa29.33■■■□□ 2.29
CHFR-217ENST00000540537 PARD3Q8TEW0 1356 aa29.33■■■□□ 2.29
CHFR-217ENST00000540537 EZH2Q15910 746 aaKnown RBP29.32■■■□□ 2.28
CHFR-217ENST00000540537 COG3Q96JB2 828 aa29.31■■■□□ 2.28
CHFR-217ENST00000540537 SBF2Q86WG5 1849 aa29.28■■■□□ 2.28
CHFR-217ENST00000540537 ANKRD24Q8TF21 1146 aa29.27■■■□□ 2.28
CHFR-217ENST00000540537 BCL9O00512 1426 aa29.27■■■□□ 2.28
CHFR-217ENST00000540537 RREB1Q92766 1687 aa29.26■■■□□ 2.27
CHFR-217ENST00000540537 CCER1Q8TC90 406 aaPredicted RBP29.26■■■□□ 2.27
CHFR-217ENST00000540537 IP6K1Q92551 441 aa29.26■■■□□ 2.27
CHFR-217ENST00000540537 NLRP2Q9NX02 1062 aa29.26■■■□□ 2.27
CHFR-217ENST00000540537 MARCH10Q8NA82 808 aaPredicted RBP29.25■■■□□ 2.27
CHFR-217ENST00000540537 PSDA5PKW4 1024 aaPredicted RBP29.24■■■□□ 2.27
CHFR-217ENST00000540537 EXOC5O00471 708 aa29.24■■■□□ 2.27
CHFR-217ENST00000540537 TNS2Q63HR2 1409 aa29.24■■■□□ 2.27
CHFR-217ENST00000540537 MYOM1P52179 1685 aa29.23■■■□□ 2.27
CHFR-217ENST00000540537 FYB1O15117 783 aa29.22■■■□□ 2.27
CHFR-217ENST00000540537 FAM208AQ9UK61 1670 aaKnown RBP29.21■■■□□ 2.27
CHFR-217ENST00000540537 MAP3K19Q56UN5 1328 aa29.21■■■□□ 2.27
CHFR-217ENST00000540537 NUP188Q5SRE5 1749 aa29.2■■■□□ 2.27
CHFR-217ENST00000540537 RGPD3A6NKT7 1758 aaPredicted RBP29.2■■■□□ 2.26
CHFR-217ENST00000540537 RGPD4Q7Z3J3 1758 aa29.2■■■□□ 2.26
CHFR-217ENST00000540537 KIF20BQ96Q89 1820 aa29.2■■■□□ 2.26
CHFR-217ENST00000540537 LRP5O75197 1615 aa29.2■■■□□ 2.26
CHFR-217ENST00000540537 IL2RBP14784 551 aa29.19■■■□□ 2.26
CHFR-217ENST00000540537 BCL11BQ9C0K0 894 aaPredicted RBP29.19■■■□□ 2.26
CHFR-217ENST00000540537 R3HDM1Q15032 1099 aaKnown RBP29.18■■■□□ 2.26
CHFR-217ENST00000540537 GGNBP2Q9H3C7 697 aa29.18■■■□□ 2.26
CHFR-217ENST00000540537 RTL1A6NKG5 1358 aa29.17■■■□□ 2.26
CHFR-217ENST00000540537 HOXC9P31274 260 aa29.17■■■□□ 2.26
CHFR-217ENST00000540537 AMPHP49418 695 aa29.17■■■□□ 2.26
CHFR-217ENST00000540537 FBLN1P23142 703 aa29.16■■■□□ 2.26
CHFR-217ENST00000540537 PLSCR1O15162 318 aa29.15■■■□□ 2.26
CHFR-217ENST00000540537 NSD3Q9BZ95 1437 aa29.13■■■□□ 2.25
CHFR-217ENST00000540537 LTV1Q96GA3 475 aaPredicted RBP29.13■■■□□ 2.25
CHFR-217ENST00000540537 CARD14Q9BXL6 1004 aa29.13■■■□□ 2.25
CHFR-217ENST00000540537 EIF4G2P78344 907 aaKnown RBP eCLIP29.12■■■□□ 2.25
CHFR-217ENST00000540537 NBPF14Q5TI25 921 aa29.12■■■□□ 2.25
CHFR-217ENST00000540537 PTF1AQ7RTS3 328 aa29.12■■■□□ 2.25
CHFR-217ENST00000540537 RRS1Q15050 365 aaKnown RBP29.11■■■□□ 2.25
CHFR-217ENST00000540537 NHSQ6T4R5 1651 aa29.08■■■□□ 2.25
CHFR-217ENST00000540537 RGPD2P0DJD1 1756 aa29.07■■■□□ 2.24
CHFR-217ENST00000540537 HSPA5P11021 654 aaKnown RBP29.07■■■□□ 2.24
CHFR-217ENST00000540537 KIF24Q5T7B8 1368 aa29.06■■■□□ 2.24
CHFR-217ENST00000540537 SMG6Q86US8 1419 aaKnown RBP29.03■■■□□ 2.24
CHFR-217ENST00000540537 FLT4P35916 1363 aa29.03■■■□□ 2.24
CHFR-217ENST00000540537 INSRP06213 1382 aa29.02■■■□□ 2.24
CHFR-217ENST00000540537 CGNL1Q0VF96 1302 aa29.02■■■□□ 2.24
CHFR-217ENST00000540537 KCNQ2O43526 872 aa29.02■■■□□ 2.24
CHFR-217ENST00000540537 POLR3GLQ9BT43 218 aa29.01■■■□□ 2.23
CHFR-217ENST00000540537 KAT6BQ8WYB5 2073 aa29.01■■■□□ 2.23
CHFR-217ENST00000540537 PROM2Q8N271 834 aa29■■■□□ 2.23
CHFR-217ENST00000540537 ACSBG1Q96GR2 724 aa29■■■□□ 2.23
CHFR-217ENST00000540537 NBPF6Q5VWK0 638 aa28.99■■■□□ 2.23
CHFR-217ENST00000540537 NBPF4Q96M43 638 aa28.99■■■□□ 2.23
CHFR-217ENST00000540537 HSP90AB2PQ58FF8 381 aa28.98■■■□□ 2.23
CHFR-217ENST00000540537 MEGF6O75095 1541 aa28.98■■■□□ 2.23
CHFR-217ENST00000540537 DDX54Q8TDD1 881 aaKnown RBP28.97■■■□□ 2.23
CHFR-217ENST00000540537 BTAF1O14981 1849 aa28.97■■■□□ 2.23
CHFR-217ENST00000540537 TXNRD1Q16881 649 aa28.96■■■□□ 2.23
CHFR-217ENST00000540537 ANO8Q9HCE9 1232 aaPredicted RBP28.96■■■□□ 2.23
CHFR-217ENST00000540537 ANKRD26Q9UPS8 1709 aa28.96■■■□□ 2.23
CHFR-217ENST00000540537 SHANK3Q9BYB0 1731 aa28.95■■■□□ 2.23
CHFR-217ENST00000540537 EMILIN1Q9Y6C2 1016 aa28.95■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms