RNA–Protein interactions for RNA: ENST00000540090.5

LPCAT3-210, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 974 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-210ENST00000540090 TTC21BQ7Z4L5 1316 aa28.71■■■□□ 2.19
LPCAT3-210ENST00000540090 QRICH2Q9H0J4 1663 aa28.71■■■□□ 2.19
LPCAT3-210ENST00000540090 YY1P25490 414 aa28.71■■■□□ 2.19
LPCAT3-210ENST00000540090 KCNH5Q8NCM2 988 aa28.71■■■□□ 2.19
LPCAT3-210ENST00000540090 BCL9O00512 1426 aa28.7■■■□□ 2.19
LPCAT3-210ENST00000540090 PROM2Q8N271 834 aa28.7■■■□□ 2.18
LPCAT3-210ENST00000540090 CARD10Q9BWT7 1032 aa28.7■■■□□ 2.18
LPCAT3-210ENST00000540090 COL18A1P39060 1754 aa28.7■■■□□ 2.18
LPCAT3-210ENST00000540090 ANO8Q9HCE9 1232 aaPredicted RBP28.69■■■□□ 2.18
LPCAT3-210ENST00000540090 NINLQ9Y2I6 1382 aa28.68■■■□□ 2.18
LPCAT3-210ENST00000540090 LRRC37A3O60309 1634 aa28.68■■■□□ 2.18
LPCAT3-210ENST00000540090 CPSF1Q10570 1443 aaKnown RBP28.68■■■□□ 2.18
LPCAT3-210ENST00000540090 PIK3C2AO00443 1686 aa28.67■■■□□ 2.18
LPCAT3-210ENST00000540090 TTC21AQ8NDW8 1320 aa28.66■■■□□ 2.18
LPCAT3-210ENST00000540090 SBF2Q86WG5 1849 aa28.64■■■□□ 2.18
LPCAT3-210ENST00000540090 DCAF8L1A6NGE4 600 aa28.64■■■□□ 2.18
LPCAT3-210ENST00000540090 CSB-PGBD3P0DP91 1061 aa28.64■■■□□ 2.18
LPCAT3-210ENST00000540090 RGPD3A6NKT7 1758 aaPredicted RBP28.64■■■□□ 2.18
LPCAT3-210ENST00000540090 RGPD4Q7Z3J3 1758 aa28.64■■■□□ 2.18
LPCAT3-210ENST00000540090 EXOC5O00471 708 aa28.63■■■□□ 2.17
LPCAT3-210ENST00000540090 SOX12O15370 315 aa28.63■■■□□ 2.17
LPCAT3-210ENST00000540090 PDGFDQ9GZP0 370 aaPredicted RBP28.62■■■□□ 2.17
LPCAT3-210ENST00000540090 SIN3AQ96ST3 1273 aa28.61■■■□□ 2.17
LPCAT3-210ENST00000540090 ROCK2O75116 1388 aaKnown RBP28.6■■■□□ 2.17
LPCAT3-210ENST00000540090 TRPM1Q7Z4N2 1603 aa28.59■■■□□ 2.17
LPCAT3-210ENST00000540090 TXNRD1Q16881 649 aa28.59■■■□□ 2.17
LPCAT3-210ENST00000540090 CCDC7Q96M83 1385 aa28.58■■■□□ 2.17
LPCAT3-210ENST00000540090 KTN1Q86UP2 1357 aaKnown RBP28.57■■■□□ 2.16
LPCAT3-210ENST00000540090 ZBTB7AO95365 584 aa28.56■■■□□ 2.16
LPCAT3-210ENST00000540090 PTGER2P43116 358 aa28.55■■■□□ 2.16
LPCAT3-210ENST00000540090 STK32BQ9NY57 414 aa28.55■■■□□ 2.16
LPCAT3-210ENST00000540090 NFAT5O94916 1531 aa28.54■■■□□ 2.16
LPCAT3-210ENST00000540090 SLC15A2Q16348 729 aa28.54■■■□□ 2.16
LPCAT3-210ENST00000540090 CASZ1Q86V15 1759 aa28.54■■■□□ 2.16
LPCAT3-210ENST00000540090 WNK3Q9BYP7 1800 aa28.53■■■□□ 2.16
LPCAT3-210ENST00000540090 NEUROD1Q13562 356 aa28.52■■■□□ 2.16
LPCAT3-210ENST00000540090 ATF5Q9Y2D1 282 aaPredicted RBP28.52■■■□□ 2.16
LPCAT3-210ENST00000540090 AKAP12Q02952 1782 aa28.52■■■□□ 2.16
LPCAT3-210ENST00000540090 USP31Q70CQ4 1352 aa28.51■■■□□ 2.16
LPCAT3-210ENST00000540090 RGPD5Q99666 1765 aa28.51■■■□□ 2.15
LPCAT3-210ENST00000540090 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.5■■■□□ 2.15
LPCAT3-210ENST00000540090 TNS2Q63HR2 1409 aa28.5■■■□□ 2.15
LPCAT3-210ENST00000540090 ABCC6O95255 1503 aa28.49■■■□□ 2.15
LPCAT3-210ENST00000540090 ERBB3P21860 1342 aa28.47■■■□□ 2.15
LPCAT3-210ENST00000540090 NLRP2Q9NX02 1062 aa28.47■■■□□ 2.15
LPCAT3-210ENST00000540090 SBNO2Q9Y2G9 1366 aa28.47■■■□□ 2.15
LPCAT3-210ENST00000540090 NME9Q86XW9 330 aa28.46■■■□□ 2.15
LPCAT3-210ENST00000540090 MTFR1LQ9H019 292 aa28.46■■■□□ 2.15
LPCAT3-210ENST00000540090 ACSBG1Q96GR2 724 aa28.45■■■□□ 2.14
LPCAT3-210ENST00000540090 UTRNP46939 3433 aa28.45■■■□□ 2.14
LPCAT3-210ENST00000540090 IL2RBP14784 551 aa28.44■■■□□ 2.14
LPCAT3-210ENST00000540090 SYT17Q9BSW7 474 aa28.44■■■□□ 2.14
LPCAT3-210ENST00000540090 SGIP1Q9BQI5 828 aa28.43■■■□□ 2.14
LPCAT3-210ENST00000540090 FHDC1Q9C0D6 1143 aaPredicted RBP28.42■■■□□ 2.14
LPCAT3-210ENST00000540090 CD163L1Q9NR16 1453 aa28.41■■■□□ 2.14
LPCAT3-210ENST00000540090 ANKRD24Q8TF21 1146 aa28.41■■■□□ 2.14
LPCAT3-210ENST00000540090 HDGFL2Q7Z4V5 671 aaPredicted RBP28.4■■■□□ 2.14
LPCAT3-210ENST00000540090 TMC1Q8TDI8 760 aa28.4■■■□□ 2.14
LPCAT3-210ENST00000540090 SLC12A5Q9H2X9 1139 aa28.4■■■□□ 2.14
LPCAT3-210ENST00000540090 MON2Q7Z3U7 1717 aa28.39■■■□□ 2.14
LPCAT3-210ENST00000540090 CARD11Q9BXL7 1154 aa28.39■■■□□ 2.14
LPCAT3-210ENST00000540090 MYOM1P52179 1685 aa28.38■■■□□ 2.13
LPCAT3-210ENST00000540090 NHSQ6T4R5 1651 aa28.36■■■□□ 2.13
LPCAT3-210ENST00000540090 USP54Q70EL1 1684 aa28.35■■■□□ 2.13
LPCAT3-210ENST00000540090 PUS7Q96PZ0 661 aaKnown RBP28.34■■■□□ 2.13
LPCAT3-210ENST00000540090 ARXQ96QS3 562 aa28.34■■■□□ 2.13
LPCAT3-210ENST00000540090 LRRC4BQ9NT99 713 aa28.34■■■□□ 2.13
LPCAT3-210ENST00000540090 TERF2IPQ9NYB0 399 aa28.34■■■□□ 2.13
LPCAT3-210ENST00000540090 EDC4Q6P2E9 1401 aaKnown RBP28.34■■■□□ 2.13
LPCAT3-210ENST00000540090 ZNF784Q8NCA9 323 aaPredicted RBP28.33■■■□□ 2.13
LPCAT3-210ENST00000540090 ZNF827Q17R98 1081 aa28.32■■■□□ 2.12
LPCAT3-210ENST00000540090 IP6K1Q92551 441 aa28.32■■■□□ 2.12
LPCAT3-210ENST00000540090 A0A1W2PP64 1363 aa28.29■■■□□ 2.12
LPCAT3-210ENST00000540090 PAPPAQ13219 1627 aa28.29■■■□□ 2.12
LPCAT3-210ENST00000540090 MAP3K5Q99683 1374 aa28.28■■■□□ 2.12
LPCAT3-210ENST00000540090 AKT1S1Q96B36 256 aa28.28■■■□□ 2.12
LPCAT3-210ENST00000540090 SLC27A3Q5K4L6 730 aa28.27■■■□□ 2.12
LPCAT3-210ENST00000540090 DDX54Q8TDD1 881 aaKnown RBP28.27■■■□□ 2.12
LPCAT3-210ENST00000540090 LTN1O94822 1766 aa28.27■■■□□ 2.12
LPCAT3-210ENST00000540090 SLC16A10Q8TF71 515 aa28.25■■■□□ 2.11
LPCAT3-210ENST00000540090 BTAF1O14981 1849 aa28.25■■■□□ 2.11
LPCAT3-210ENST00000540090 LTV1Q96GA3 475 aaPredicted RBP28.24■■■□□ 2.11
LPCAT3-210ENST00000540090 KAT6BQ8WYB5 2073 aa28.22■■■□□ 2.11
LPCAT3-210ENST00000540090 PRIM1P49642 420 aaKnown RBP28.2■■■□□ 2.1
LPCAT3-210ENST00000540090 COG3Q96JB2 828 aa28.2■■■□□ 2.1
LPCAT3-210ENST00000540090 MAP3K19Q56UN5 1328 aa28.19■■■□□ 2.1
LPCAT3-210ENST00000540090 TESK2Q96S53 571 aa28.19■■■□□ 2.1
LPCAT3-210ENST00000540090 PNPLA7Q6ZV29 1317 aa28.18■■■□□ 2.1
LPCAT3-210ENST00000540090 HOXC9P31274 260 aa28.18■■■□□ 2.1
LPCAT3-210ENST00000540090 ANKRD36BQ8N2N9 1353 aa28.17■■■□□ 2.1
LPCAT3-210ENST00000540090 FBLN1P23142 703 aa28.17■■■□□ 2.1
LPCAT3-210ENST00000540090 POLD1P28340 1107 aa28.17■■■□□ 2.1
LPCAT3-210ENST00000540090 SYTL4Q96C24 671 aaPredicted RBP28.17■■■□□ 2.1
LPCAT3-210ENST00000540090 TFCP2L1Q9NZI6 479 aa28.17■■■□□ 2.1
LPCAT3-210ENST00000540090 AMPHP49418 695 aa28.16■■■□□ 2.1
LPCAT3-210ENST00000540090 KCNQ4P56696 695 aa28.16■■■□□ 2.1
LPCAT3-210ENST00000540090 GPR162Q16538 588 aa28.16■■■□□ 2.1
LPCAT3-210ENST00000540090 ZCRB1Q8TBF4 217 aaKnown RBP28.16■■■□□ 2.1
LPCAT3-210ENST00000540090 TONSLQ96HA7 1378 aa28.15■■■□□ 2.1
LPCAT3-210ENST00000540090 ST20-MTHFSA0A0A6YYL1 179 aa28.14■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 125.6 ms