RNA–Protein interactions for RNA: ENST00000538036.1

VPS37C-204, Transcript of VPS37C, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS37C, Length 506 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37C-204ENST00000538036 EVC2Q86UK5 1308 aa14.75□□□□□ -0.05
VPS37C-204ENST00000538036 MARCH10Q8NA82 808 aaPredicted RBP14.75□□□□□ -0.05
VPS37C-204ENST00000538036 CARD10Q9BWT7 1032 aa14.75□□□□□ -0.05
VPS37C-204ENST00000538036 AXIN2Q9Y2T1 843 aa14.75□□□□□ -0.05
VPS37C-204ENST00000538036 PEAK1Q9H792 1746 aa14.75□□□□□ -0.05
VPS37C-204ENST00000538036 ARHGEF25Q86VW2 580 aa14.74□□□□□ -0.05
VPS37C-204ENST00000538036 PROM2Q8N271 834 aa14.74□□□□□ -0.05
VPS37C-204ENST00000538036 EXOC5O00471 708 aa14.73□□□□□ -0.05
VPS37C-204ENST00000538036 ANO8Q9HCE9 1232 aaPredicted RBP14.73□□□□□ -0.05
VPS37C-204ENST00000538036 STK32BQ9NY57 414 aa14.72□□□□□ -0.05
VPS37C-204ENST00000538036 CPSF1Q10570 1443 aaKnown RBP14.72□□□□□ -0.05
VPS37C-204ENST00000538036 TTC21BQ7Z4L5 1316 aa14.71□□□□□ -0.05
VPS37C-204ENST00000538036 TTC21AQ8NDW8 1320 aa14.71□□□□□ -0.05
VPS37C-204ENST00000538036 LRRC37A3O60309 1634 aa14.71□□□□□ -0.05
VPS37C-204ENST00000538036 CSB-PGBD3P0DP91 1061 aa14.71□□□□□ -0.05
VPS37C-204ENST00000538036 TXNRD1Q16881 649 aa14.71□□□□□ -0.05
VPS37C-204ENST00000538036 PTF1AQ7RTS3 328 aa14.71□□□□□ -0.05
VPS37C-204ENST00000538036 PTGER2P43116 358 aa14.7□□□□□ -0.06
VPS37C-204ENST00000538036 SLC15A2Q16348 729 aa14.7□□□□□ -0.06
VPS37C-204ENST00000538036 CCDC7Q96M83 1385 aa14.7□□□□□ -0.06
VPS37C-204ENST00000538036 ZBTB7AO95365 584 aa14.69□□□□□ -0.06
VPS37C-204ENST00000538036 COL18A1P39060 1754 aa14.69□□□□□ -0.06
VPS37C-204ENST00000538036 SBF2Q86WG5 1849 aa14.69□□□□□ -0.06
VPS37C-204ENST00000538036 PDGFDQ9GZP0 370 aaPredicted RBP14.68□□□□□ -0.06
VPS37C-204ENST00000538036 MTFR1LQ9H019 292 aa14.68□□□□□ -0.06
VPS37C-204ENST00000538036 ATF5Q9Y2D1 282 aaPredicted RBP14.67□□□□□ -0.06
VPS37C-204ENST00000538036 QRICH2Q9H0J4 1663 aa14.67□□□□□ -0.06
VPS37C-204ENST00000538036 CASZ1Q86V15 1759 aa14.67□□□□□ -0.06
VPS37C-204ENST00000538036 PIK3C2AO00443 1686 aa14.66□□□□□ -0.06
VPS37C-204ENST00000538036 L3MBTL2Q969R5 705 aa14.66□□□□□ -0.06
VPS37C-204ENST00000538036 SYT17Q9BSW7 474 aa14.66□□□□□ -0.06
VPS37C-204ENST00000538036 ABCC6O95255 1503 aa14.66□□□□□ -0.06
VPS37C-204ENST00000538036 FHDC1Q9C0D6 1143 aaPredicted RBP14.65□□□□□ -0.06
VPS37C-204ENST00000538036 KTN1Q86UP2 1357 aaKnown RBP14.64□□□□□ -0.07
VPS37C-204ENST00000538036 SOX12O15370 315 aa14.64□□□□□ -0.07
VPS37C-204ENST00000538036 ZNF784Q8NCA9 323 aaPredicted RBP14.64□□□□□ -0.07
VPS37C-204ENST00000538036 SGIP1Q9BQI5 828 aa14.64□□□□□ -0.07
VPS37C-204ENST00000538036 TNS2Q63HR2 1409 aa14.64□□□□□ -0.07
VPS37C-204ENST00000538036 TRPM1Q7Z4N2 1603 aa14.63□□□□□ -0.07
VPS37C-204ENST00000538036 USP31Q70CQ4 1352 aa14.62□□□□□ -0.07
VPS37C-204ENST00000538036 WNK3Q9BYP7 1800 aa14.62□□□□□ -0.07
VPS37C-204ENST00000538036 IL2RBP14784 551 aa14.62□□□□□ -0.07
VPS37C-204ENST00000538036 AKAP12Q02952 1782 aa14.62□□□□□ -0.07
VPS37C-204ENST00000538036 NFAT5O94916 1531 aa14.61□□□□□ -0.07
VPS37C-204ENST00000538036 ROCK2O75116 1388 aaKnown RBP14.61□□□□□ -0.07
VPS37C-204ENST00000538036 ARXQ96QS3 562 aa14.61□□□□□ -0.07
VPS37C-204ENST00000538036 NLRP2Q9NX02 1062 aa14.61□□□□□ -0.07
VPS37C-204ENST00000538036 ERBB3P21860 1342 aa14.61□□□□□ -0.07
VPS37C-204ENST00000538036 MAP3K5Q99683 1374 aa14.6□□□□□ -0.07
VPS37C-204ENST00000538036 MYOM1P52179 1685 aa14.59□□□□□ -0.07
VPS37C-204ENST00000538036 SLC16A10Q8TF71 515 aa14.59□□□□□ -0.07
VPS37C-204ENST00000538036 ACSBG1Q96GR2 724 aa14.59□□□□□ -0.07
VPS37C-204ENST00000538036 SBNO2Q9Y2G9 1366 aa14.59□□□□□ -0.07
VPS37C-204ENST00000538036 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.58□□□□□ -0.08
VPS37C-204ENST00000538036 SLC27A3Q5K4L6 730 aa14.57□□□□□ -0.08
VPS37C-204ENST00000538036 HDGFL2Q7Z4V5 671 aaPredicted RBP14.57□□□□□ -0.08
VPS37C-204ENST00000538036 ANKRD24Q8TF21 1146 aa14.57□□□□□ -0.08
VPS37C-204ENST00000538036 RGPD5Q99666 1765 aa14.57□□□□□ -0.08
VPS37C-204ENST00000538036 NHSQ6T4R5 1651 aa14.56□□□□□ -0.08
VPS37C-204ENST00000538036 NME9Q86XW9 330 aa14.55□□□□□ -0.08
VPS37C-204ENST00000538036 PUS7Q96PZ0 661 aaKnown RBP14.55□□□□□ -0.08
VPS37C-204ENST00000538036 POLD1P28340 1107 aa14.54□□□□□ -0.08
VPS37C-204ENST00000538036 GPR162Q16538 588 aa14.54□□□□□ -0.08
VPS37C-204ENST00000538036 ZNF827Q17R98 1081 aa14.54□□□□□ -0.08
VPS37C-204ENST00000538036 AKT1S1Q96B36 256 aa14.54□□□□□ -0.08
VPS37C-204ENST00000538036 SIN3AQ96ST3 1273 aa14.54□□□□□ -0.08
VPS37C-204ENST00000538036 LRRC4BQ9NT99 713 aa14.54□□□□□ -0.08
VPS37C-204ENST00000538036 TERF2IPQ9NYB0 399 aa14.54□□□□□ -0.08
VPS37C-204ENST00000538036 C1QTNF8P60827 252 aa14.53□□□□□ -0.08
VPS37C-204ENST00000538036 TMC1Q8TDI8 760 aa14.53□□□□□ -0.08
VPS37C-204ENST00000538036 PAPPAQ13219 1627 aa14.52□□□□□ -0.08
VPS37C-204ENST00000538036 EDC4Q6P2E9 1401 aaKnown RBP14.52□□□□□ -0.08
VPS37C-204ENST00000538036 NEUROD1Q13562 356 aa14.52□□□□□ -0.09
VPS37C-204ENST00000538036 IP6K1Q92551 441 aa14.52□□□□□ -0.09
VPS37C-204ENST00000538036 MON2Q7Z3U7 1717 aa14.52□□□□□ -0.09
VPS37C-204ENST00000538036 USP54Q70EL1 1684 aa14.52□□□□□ -0.09
VPS37C-204ENST00000538036 CD163L1Q9NR16 1453 aa14.51□□□□□ -0.09
VPS37C-204ENST00000538036 DDX54Q8TDD1 881 aaKnown RBP14.51□□□□□ -0.09
VPS37C-204ENST00000538036 CARD11Q9BXL7 1154 aa14.51□□□□□ -0.09
VPS37C-204ENST00000538036 SLC12A5Q9H2X9 1139 aa14.51□□□□□ -0.09
VPS37C-204ENST00000538036 UTRNP46939 3433 aa14.5□□□□□ -0.09
VPS37C-204ENST00000538036 SENP3-EIF4A1A0A087X0R7 540 aa14.5□□□□□ -0.09
VPS37C-204ENST00000538036 HMGB2P26583 209 aaKnown RBP14.5□□□□□ -0.09
VPS37C-204ENST00000538036 TFCP2L1Q9NZI6 479 aa14.5□□□□□ -0.09
VPS37C-204ENST00000538036 CHD4Q14839 1912 aa14.5□□□□□ -0.09
VPS37C-204ENST00000538036 BTAF1O14981 1849 aa14.48□□□□□ -0.09
VPS37C-204ENST00000538036 PNPLA7Q6ZV29 1317 aa14.48□□□□□ -0.09
VPS37C-204ENST00000538036 SLC24A1O60721 1099 aa14.48□□□□□ -0.09
VPS37C-204ENST00000538036 PRIM1P49642 420 aaKnown RBP14.48□□□□□ -0.09
VPS37C-204ENST00000538036 ANKRD36BQ8N2N9 1353 aa14.47□□□□□ -0.09
VPS37C-204ENST00000538036 GRIN3BO60391 1043 aa14.46□□□□□ -0.09
VPS37C-204ENST00000538036 GIGYF1O75420 1035 aaPredicted RBP14.46□□□□□ -0.09
VPS37C-204ENST00000538036 KLHL34Q8N239 644 aa14.46□□□□□ -0.09
VPS37C-204ENST00000538036 ZCRB1Q8TBF4 217 aaKnown RBP14.46□□□□□ -0.09
VPS37C-204ENST00000538036 SYTL4Q96C24 671 aaPredicted RBP14.46□□□□□ -0.09
VPS37C-204ENST00000538036 COG3Q96JB2 828 aa14.46□□□□□ -0.09
VPS37C-204ENST00000538036 A0A1W2PP64 1363 aa14.46□□□□□ -0.1
VPS37C-204ENST00000538036 LTN1O94822 1766 aa14.45□□□□□ -0.1
VPS37C-204ENST00000538036 LTV1Q96GA3 475 aaPredicted RBP14.45□□□□□ -0.1
VPS37C-204ENST00000538036 KAT6BQ8WYB5 2073 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms