RNA–Protein interactions for RNA: ENST00000536196.1

CHFR-212, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 597 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-212ENST00000536196 USP31Q70CQ4 1352 aa29.6■■■□□ 2.33
CHFR-212ENST00000536196 NINLQ9Y2I6 1382 aa29.6■■■□□ 2.33
CHFR-212ENST00000536196 TNS1Q9HBL0 1735 aaKnown RBP29.59■■■□□ 2.33
CHFR-212ENST00000536196 WNK3Q9BYP7 1800 aa29.59■■■□□ 2.33
CHFR-212ENST00000536196 SOX12O15370 315 aa29.59■■■□□ 2.33
CHFR-212ENST00000536196 A0A1W2PP64 1363 aa29.59■■■□□ 2.33
CHFR-212ENST00000536196 USP47Q96K76 1375 aa29.59■■■□□ 2.33
CHFR-212ENST00000536196 LTN1O94822 1766 aa29.58■■■□□ 2.33
CHFR-212ENST00000536196 ABCC6O95255 1503 aa29.57■■■□□ 2.32
CHFR-212ENST00000536196 BAG6P46379 1132 aa29.57■■■□□ 2.32
CHFR-212ENST00000536196 NME9Q86XW9 330 aa29.56■■■□□ 2.32
CHFR-212ENST00000536196 PDE3BQ13370 1112 aa29.55■■■□□ 2.32
CHFR-212ENST00000536196 AXIN2Q9Y2T1 843 aa29.55■■■□□ 2.32
CHFR-212ENST00000536196 WDR17Q8IZU2 1322 aa29.54■■■□□ 2.32
CHFR-212ENST00000536196 FAM196AQ6ZSG2 479 aa29.54■■■□□ 2.32
CHFR-212ENST00000536196 TOM1L2Q6ZVM7 507 aa29.53■■■□□ 2.32
CHFR-212ENST00000536196 TMF1P82094 1093 aa29.51■■■□□ 2.31
CHFR-212ENST00000536196 LRRC37A3O60309 1634 aa29.51■■■□□ 2.31
CHFR-212ENST00000536196 OVOS2A0A0J9YW53 1432 aa29.48■■■□□ 2.31
CHFR-212ENST00000536196 DISP2A7MBM2 1401 aa29.48■■■□□ 2.31
CHFR-212ENST00000536196 OVOS2Q6IE36 1432 aa29.48■■■□□ 2.31
CHFR-212ENST00000536196 CSB-PGBD3P0DP91 1061 aa29.47■■■□□ 2.31
CHFR-212ENST00000536196 ANKRD36BQ8N2N9 1353 aa29.45■■■□□ 2.31
CHFR-212ENST00000536196 TRIM37O94972 964 aa29.45■■■□□ 2.31
CHFR-212ENST00000536196 EN1Q05925 392 aaPredicted RBP29.44■■■□□ 2.3
CHFR-212ENST00000536196 CARD10Q9BWT7 1032 aa29.44■■■□□ 2.3
CHFR-212ENST00000536196 PEAK1Q9H792 1746 aa29.44■■■□□ 2.3
CHFR-212ENST00000536196 SBF2Q86WG5 1849 aa29.43■■■□□ 2.3
CHFR-212ENST00000536196 DDB1Q16531 1140 aa29.42■■■□□ 2.3
CHFR-212ENST00000536196 CDCA8Q53HL2 280 aa29.42■■■□□ 2.3
CHFR-212ENST00000536196 CDCA7Q9BWT1 371 aaPredicted RBP29.42■■■□□ 2.3
CHFR-212ENST00000536196 C11orf95C9JLR9 678 aaPredicted RBP29.41■■■□□ 2.3
CHFR-212ENST00000536196 CCDC7Q96M83 1385 aa29.4■■■□□ 2.3
CHFR-212ENST00000536196 OVOS2A0A0G2JMS6 1433 aa29.4■■■□□ 2.3
CHFR-212ENST00000536196 CCER1Q8TC90 406 aaPredicted RBP29.39■■■□□ 2.3
CHFR-212ENST00000536196 KIF20BQ96Q89 1820 aa29.38■■■□□ 2.29
CHFR-212ENST00000536196 MYOM1P52179 1685 aa29.38■■■□□ 2.29
CHFR-212ENST00000536196 ERBB3P21860 1342 aa29.38■■■□□ 2.29
CHFR-212ENST00000536196 APBA3O96018 575 aa29.37■■■□□ 2.29
CHFR-212ENST00000536196 COG3Q96JB2 828 aa29.37■■■□□ 2.29
CHFR-212ENST00000536196 RREB1Q92766 1687 aa29.36■■■□□ 2.29
CHFR-212ENST00000536196 FAM208AQ9UK61 1670 aaKnown RBP29.36■■■□□ 2.29
CHFR-212ENST00000536196 EZH2Q15910 746 aaKnown RBP29.35■■■□□ 2.29
CHFR-212ENST00000536196 PARD3Q8TEW0 1356 aa29.35■■■□□ 2.29
CHFR-212ENST00000536196 CAMKK2Q96RR4 588 aa29.33■■■□□ 2.29
CHFR-212ENST00000536196 ANKRD24Q8TF21 1146 aa29.32■■■□□ 2.28
CHFR-212ENST00000536196 NLRP2Q9NX02 1062 aa29.32■■■□□ 2.28
CHFR-212ENST00000536196 SRCAPQ6ZRS2 3230 aa29.31■■■□□ 2.28
CHFR-212ENST00000536196 NUP188Q5SRE5 1749 aa29.31■■■□□ 2.28
CHFR-212ENST00000536196 IP6K1Q92551 441 aa29.3■■■□□ 2.28
CHFR-212ENST00000536196 RGPD3A6NKT7 1758 aaPredicted RBP29.3■■■□□ 2.28
CHFR-212ENST00000536196 RGPD4Q7Z3J3 1758 aa29.3■■■□□ 2.28
CHFR-212ENST00000536196 TNS2Q63HR2 1409 aa29.29■■■□□ 2.28
CHFR-212ENST00000536196 EXOC5O00471 708 aa29.29■■■□□ 2.28
CHFR-212ENST00000536196 PSDA5PKW4 1024 aaPredicted RBP29.28■■■□□ 2.28
CHFR-212ENST00000536196 MARCH10Q8NA82 808 aaPredicted RBP29.28■■■□□ 2.28
CHFR-212ENST00000536196 BCL9O00512 1426 aa29.28■■■□□ 2.28
CHFR-212ENST00000536196 FYB1O15117 783 aa29.27■■■□□ 2.28
CHFR-212ENST00000536196 MAP3K19Q56UN5 1328 aa29.26■■■□□ 2.27
CHFR-212ENST00000536196 LRP5O75197 1615 aa29.26■■■□□ 2.27
CHFR-212ENST00000536196 GGNBP2Q9H3C7 697 aa29.25■■■□□ 2.27
CHFR-212ENST00000536196 RGPD2P0DJD1 1756 aa29.25■■■□□ 2.27
CHFR-212ENST00000536196 IL2RBP14784 551 aa29.23■■■□□ 2.27
CHFR-212ENST00000536196 AMPHP49418 695 aa29.23■■■□□ 2.27
CHFR-212ENST00000536196 FBLN1P23142 703 aa29.22■■■□□ 2.27
CHFR-212ENST00000536196 HOXC9P31274 260 aa29.22■■■□□ 2.27
CHFR-212ENST00000536196 RTL1A6NKG5 1358 aa29.22■■■□□ 2.27
CHFR-212ENST00000536196 KAT6BQ8WYB5 2073 aa29.21■■■□□ 2.27
CHFR-212ENST00000536196 R3HDM1Q15032 1099 aaKnown RBP29.21■■■□□ 2.27
CHFR-212ENST00000536196 LTV1Q96GA3 475 aaPredicted RBP29.21■■■□□ 2.27
CHFR-212ENST00000536196 BCL11BQ9C0K0 894 aaPredicted RBP29.21■■■□□ 2.27
CHFR-212ENST00000536196 NSD3Q9BZ95 1437 aa29.2■■■□□ 2.27
CHFR-212ENST00000536196 EIF4G2P78344 907 aaKnown RBP eCLIP29.2■■■□□ 2.26
CHFR-212ENST00000536196 NHSQ6T4R5 1651 aa29.18■■■□□ 2.26
CHFR-212ENST00000536196 CARD14Q9BXL6 1004 aa29.18■■■□□ 2.26
CHFR-212ENST00000536196 PLSCR1O15162 318 aa29.17■■■□□ 2.26
CHFR-212ENST00000536196 RRS1Q15050 365 aaKnown RBP29.17■■■□□ 2.26
CHFR-212ENST00000536196 HSPA5P11021 654 aaKnown RBP29.15■■■□□ 2.26
CHFR-212ENST00000536196 NBPF14Q5TI25 921 aa29.15■■■□□ 2.26
CHFR-212ENST00000536196 PTF1AQ7RTS3 328 aa29.15■■■□□ 2.26
CHFR-212ENST00000536196 POLR3GLQ9BT43 218 aa29.14■■■□□ 2.26
CHFR-212ENST00000536196 ANKRD26Q9UPS8 1709 aa29.12■■■□□ 2.25
CHFR-212ENST00000536196 SMG6Q86US8 1419 aaKnown RBP29.11■■■□□ 2.25
CHFR-212ENST00000536196 MAP2P11137 1827 aaKnown RBP29.11■■■□□ 2.25
CHFR-212ENST00000536196 KIF24Q5T7B8 1368 aa29.11■■■□□ 2.25
CHFR-212ENST00000536196 BTAF1O14981 1849 aa29.09■■■□□ 2.25
CHFR-212ENST00000536196 CGNL1Q0VF96 1302 aa29.09■■■□□ 2.25
CHFR-212ENST00000536196 FLT4P35916 1363 aa29.09■■■□□ 2.25
CHFR-212ENST00000536196 SHANK3Q9BYB0 1731 aa29.08■■■□□ 2.25
CHFR-212ENST00000536196 INSRP06213 1382 aa29.07■■■□□ 2.24
CHFR-212ENST00000536196 KCNQ2O43526 872 aa29.06■■■□□ 2.24
CHFR-212ENST00000536196 ACSBG1Q96GR2 724 aa29.06■■■□□ 2.24
CHFR-212ENST00000536196 MEGF6O75095 1541 aa29.04■■■□□ 2.24
CHFR-212ENST00000536196 HSP90AB2PQ58FF8 381 aa29.03■■■□□ 2.24
CHFR-212ENST00000536196 NBPF6Q5VWK0 638 aa29.03■■■□□ 2.24
CHFR-212ENST00000536196 DDX54Q8TDD1 881 aaKnown RBP29.03■■■□□ 2.24
CHFR-212ENST00000536196 NBPF4Q96M43 638 aa29.03■■■□□ 2.24
CHFR-212ENST00000536196 PROM2Q8N271 834 aa29.02■■■□□ 2.24
CHFR-212ENST00000536196 DOT1LQ8TEK3 1739 aa29.02■■■□□ 2.24
CHFR-212ENST00000536196 EMILIN1Q9Y6C2 1016 aa29.01■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms