RNA–Protein interactions for RNA: ENST00000535527.5

CHFR-210, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 746 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-210ENST00000535527 MAP2P11137 1827 aaKnown RBP18.19■□□□□ 0.5
CHFR-210ENST00000535527 WNK3Q9BYP7 1800 aa18.19■□□□□ 0.5
CHFR-210ENST00000535527 FBLN1P23142 703 aa18.18■□□□□ 0.5
CHFR-210ENST00000535527 PANK3Q9H999 370 aa18.18■□□□□ 0.5
CHFR-210ENST00000535527 CPDO75976 1380 aa18.17■□□□□ 0.5
CHFR-210ENST00000535527 FAM83GA6ND36 823 aa18.17■□□□□ 0.5
CHFR-210ENST00000535527 FYB1O15117 783 aa18.17■□□□□ 0.5
CHFR-210ENST00000535527 A0A0G2JS52 829 aa18.16■□□□□ 0.5
CHFR-210ENST00000535527 MYT1Q01538 1121 aa18.16■□□□□ 0.5
CHFR-210ENST00000535527 CHRNA2Q15822 529 aa18.16■□□□□ 0.5
CHFR-210ENST00000535527 GGNBP2Q9H3C7 697 aa18.16■□□□□ 0.5
CHFR-210ENST00000535527 GCP02774 474 aa18.15■□□□□ 0.5
CHFR-210ENST00000535527 ZC3H6P61129 1189 aaKnown RBP18.15■□□□□ 0.5
CHFR-210ENST00000535527 EN1Q05925 392 aaPredicted RBP18.15■□□□□ 0.5
CHFR-210ENST00000535527 NLRP13Q86W25 1043 aa18.15■□□□□ 0.5
CHFR-210ENST00000535527 DISP2A7MBM2 1401 aa18.15■□□□□ 0.5
CHFR-210ENST00000535527 SOX12O15370 315 aa18.14■□□□□ 0.49
CHFR-210ENST00000535527 FAM98CQ17RN3 349 aaKnown RBP18.14■□□□□ 0.49
CHFR-210ENST00000535527 RGPD1P0DJD0 1748 aa18.14■□□□□ 0.49
CHFR-210ENST00000535527 PER1O15534 1290 aaPredicted RBP18.13■□□□□ 0.49
CHFR-210ENST00000535527 R3HDM1Q15032 1099 aaKnown RBP18.13■□□□□ 0.49
CHFR-210ENST00000535527 COL5A2P05997 1499 aaPredicted RBP18.13■□□□□ 0.49
CHFR-210ENST00000535527 ABCC6O95255 1503 aa18.13■□□□□ 0.49
CHFR-210ENST00000535527 BTG4Q9NY30 223 aa18.11■□□□□ 0.49
CHFR-210ENST00000535527 FAM208AQ9UK61 1670 aaKnown RBP18.1■□□□□ 0.49
CHFR-210ENST00000535527 AMER1Q5JTC6 1135 aaPredicted RBP18.1■□□□□ 0.49
CHFR-210ENST00000535527 ARHGEF25Q86VW2 580 aa18.1■□□□□ 0.49
CHFR-210ENST00000535527 PRDM11Q9NQV5 511 aa18.1■□□□□ 0.49
CHFR-210ENST00000535527 THSD7AQ9UPZ6 1657 aa18.09■□□□□ 0.49
CHFR-210ENST00000535527 AXIN2Q9Y2T1 843 aa18.09■□□□□ 0.49
CHFR-210ENST00000535527 AATKQ6ZMQ8 1374 aa18.08■□□□□ 0.49
CHFR-210ENST00000535527 SPATA31A5Q5VU36 1347 aa18.08■□□□□ 0.49
CHFR-210ENST00000535527 SPATA31A7Q8IWB4 1347 aa18.08■□□□□ 0.49
CHFR-210ENST00000535527 YY1P25490 414 aa18.07■□□□□ 0.48
CHFR-210ENST00000535527 CAMKK2Q96RR4 588 aa18.07■□□□□ 0.48
CHFR-210ENST00000535527 PARD3Q8TEW0 1356 aa18.06■□□□□ 0.48
CHFR-210ENST00000535527 CGNL1Q0VF96 1302 aa18.06■□□□□ 0.48
CHFR-210ENST00000535527 MAP3K19Q56UN5 1328 aa18.06■□□□□ 0.48
CHFR-210ENST00000535527 EZH2Q15910 746 aaKnown RBP18.06■□□□□ 0.48
CHFR-210ENST00000535527 ZBTB7CA1YPR0 619 aa18.05■□□□□ 0.48
CHFR-210ENST00000535527 RRS1Q15050 365 aaKnown RBP18.05■□□□□ 0.48
CHFR-210ENST00000535527 FAM182BQ5T319 152 aa18.05■□□□□ 0.48
CHFR-210ENST00000535527 FAM196AQ6ZSG2 479 aa18.05■□□□□ 0.48
CHFR-210ENST00000535527 COG3Q96JB2 828 aa18.05■□□□□ 0.48
CHFR-210ENST00000535527 SMG6Q86US8 1419 aaKnown RBP18.05■□□□□ 0.48
CHFR-210ENST00000535527 NSD2O96028 1365 aa18.04■□□□□ 0.48
CHFR-210ENST00000535527 TNS1Q9HBL0 1735 aaKnown RBP18.03■□□□□ 0.48
CHFR-210ENST00000535527 LRRC37A3O60309 1634 aa18.03■□□□□ 0.48
CHFR-210ENST00000535527 KCNH5Q8NCM2 988 aa18.03■□□□□ 0.48
CHFR-210ENST00000535527 SHANK3Q9BYB0 1731 aa18.03■□□□□ 0.48
CHFR-210ENST00000535527 PARP4Q9UKK3 1724 aaKnown RBP18.02■□□□□ 0.48
CHFR-210ENST00000535527 EMILIN1Q9Y6C2 1016 aa18.02■□□□□ 0.48
CHFR-210ENST00000535527 TRIM37O94972 964 aa18■□□□□ 0.47
CHFR-210ENST00000535527 APBA3O96018 575 aa18■□□□□ 0.47
CHFR-210ENST00000535527 LARP1Q6PKG0 1096 aaKnown RBP18■□□□□ 0.47
CHFR-210ENST00000535527 NPC1L1Q9UHC9 1359 aa18■□□□□ 0.47
CHFR-210ENST00000535527 DCAF8L1A6NGE4 600 aa17.99■□□□□ 0.47
CHFR-210ENST00000535527 CC2D1BQ5T0F9 858 aaKnown RBP17.99■□□□□ 0.47
CHFR-210ENST00000535527 NBPF14Q5TI25 921 aa17.99■□□□□ 0.47
CHFR-210ENST00000535527 STRN4Q9NRL3 753 aa17.99■□□□□ 0.47
CHFR-210ENST00000535527 KNSTRNQ9Y448 316 aa17.99■□□□□ 0.47
CHFR-210ENST00000535527 RTL1A6NKG5 1358 aa17.99■□□□□ 0.47
CHFR-210ENST00000535527 SPATA31A1Q5TZJ5 1347 aa17.98■□□□□ 0.47
CHFR-210ENST00000535527 HOXC9P31274 260 aa17.98■□□□□ 0.47
CHFR-210ENST00000535527 TNNT2P45379 298 aaPredicted RBP17.98■□□□□ 0.47
CHFR-210ENST00000535527 COL3A1P02461 1466 aaPredicted RBP17.98■□□□□ 0.47
CHFR-210ENST00000535527 ERBB3P21860 1342 aa17.98■□□□□ 0.47
CHFR-210ENST00000535527 DDX10Q13206 875 aaKnown RBP17.97■□□□□ 0.47
CHFR-210ENST00000535527 POLKQ9UBT6 870 aa17.97■□□□□ 0.47
CHFR-210ENST00000535527 CRB1P82279 1406 aa17.97■□□□□ 0.47
CHFR-210ENST00000535527 CNGB1Q14028 1251 aaPredicted RBP17.96■□□□□ 0.47
CHFR-210ENST00000535527 WDR17Q8IZU2 1322 aa17.96■□□□□ 0.46
CHFR-210ENST00000535527 IP6K1Q92551 441 aa17.95■□□□□ 0.46
CHFR-210ENST00000535527 SPON1Q9HCB6 807 aa17.95■□□□□ 0.46
CHFR-210ENST00000535527 FLT4P35916 1363 aa17.94■□□□□ 0.46
CHFR-210ENST00000535527 ZNF316A6NFI3 1004 aaPredicted RBP17.94■□□□□ 0.46
CHFR-210ENST00000535527 HSP90AB2PQ58FF8 381 aa17.94■□□□□ 0.46
CHFR-210ENST00000535527 NCAPD2Q15021 1401 aa17.93■□□□□ 0.46
CHFR-210ENST00000535527 PDE3BQ13370 1112 aa17.93■□□□□ 0.46
CHFR-210ENST00000535527 BARGINQ6ZT62 677 aa17.93■□□□□ 0.46
CHFR-210ENST00000535527 PPP1R1BQ9UD71 204 aaPredicted RBP17.93■□□□□ 0.46
CHFR-210ENST00000535527 RREB1Q92766 1687 aa17.93■□□□□ 0.46
CHFR-210ENST00000535527 INSRP06213 1382 aa17.92■□□□□ 0.46
CHFR-210ENST00000535527 KCNQ2O43526 872 aa17.92■□□□□ 0.46
CHFR-210ENST00000535527 MORC1Q86VD1 984 aa17.92■□□□□ 0.46
CHFR-210ENST00000535527 ANKRD24Q8TF21 1146 aa17.92■□□□□ 0.46
CHFR-210ENST00000535527 PKD1L3Q7Z443 1732 aa17.91■□□□□ 0.46
CHFR-210ENST00000535527 MEGF6O75095 1541 aa17.91■□□□□ 0.46
CHFR-210ENST00000535527 KIF24Q5T7B8 1368 aa17.91■□□□□ 0.46
CHFR-210ENST00000535527 AMPHP49418 695 aa17.9■□□□□ 0.46
CHFR-210ENST00000535527 LTV1Q96GA3 475 aaPredicted RBP17.9■□□□□ 0.46
CHFR-210ENST00000535527 USP35Q9P2H5 1018 aa17.9■□□□□ 0.46
CHFR-210ENST00000535527 SBF2Q86WG5 1849 aa17.9■□□□□ 0.46
CHFR-210ENST00000535527 NUP188Q5SRE5 1749 aa17.89■□□□□ 0.45
CHFR-210ENST00000535527 EVA1CP58658 441 aa17.88■□□□□ 0.45
CHFR-210ENST00000535527 USHBP1Q8N6Y0 703 aa17.87■□□□□ 0.45
CHFR-210ENST00000535527 PPM1GO15355 546 aaPredicted RBP17.86■□□□□ 0.45
CHFR-210ENST00000535527 NBPF6Q5VWK0 638 aa17.86■□□□□ 0.45
CHFR-210ENST00000535527 TOM1L2Q6ZVM7 507 aa17.86■□□□□ 0.45
CHFR-210ENST00000535527 NBPF4Q96M43 638 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms