RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 CSB-PGBD3P0DP91 1061 aa12.56□□□□□ -0.4
COPB1-211ENST00000534234 NME9Q86XW9 330 aa12.56□□□□□ -0.4
COPB1-211ENST00000534234 CAMKK2Q96RR4 588 aa12.56□□□□□ -0.4
COPB1-211ENST00000534234 DDB1Q16531 1140 aa12.56□□□□□ -0.4
COPB1-211ENST00000534234 TESK2Q96S53 571 aa12.56□□□□□ -0.4
COPB1-211ENST00000534234 C11orf95C9JLR9 678 aaPredicted RBP12.55□□□□□ -0.4
COPB1-211ENST00000534234 DISP2A7MBM2 1401 aa12.55□□□□□ -0.4
COPB1-211ENST00000534234 USP31Q70CQ4 1352 aa12.54□□□□□ -0.4
COPB1-211ENST00000534234 SRCAPQ6ZRS2 3230 aa12.54□□□□□ -0.4
COPB1-211ENST00000534234 PIK3C2AO00443 1686 aa12.54□□□□□ -0.4
COPB1-211ENST00000534234 CDCA7Q9BWT1 371 aaPredicted RBP12.54□□□□□ -0.4
COPB1-211ENST00000534234 CARD10Q9BWT7 1032 aa12.54□□□□□ -0.4
COPB1-211ENST00000534234 CD163L1Q9NR16 1453 aa12.53□□□□□ -0.4
COPB1-211ENST00000534234 R3HDM1Q15032 1099 aaKnown RBP12.53□□□□□ -0.4
COPB1-211ENST00000534234 EDC4Q6P2E9 1401 aaKnown RBP12.52□□□□□ -0.41
COPB1-211ENST00000534234 A0A1W2PP64 1363 aa12.51□□□□□ -0.41
COPB1-211ENST00000534234 EXOC5O00471 708 aa12.51□□□□□ -0.41
COPB1-211ENST00000534234 MARCH10Q8NA82 808 aaPredicted RBP12.51□□□□□ -0.41
COPB1-211ENST00000534234 PCGF6Q9BYE7 350 aa12.51□□□□□ -0.41
COPB1-211ENST00000534234 PARD3Q8TEW0 1356 aa12.51□□□□□ -0.41
COPB1-211ENST00000534234 TMF1P82094 1093 aa12.5□□□□□ -0.41
COPB1-211ENST00000534234 NLRP2Q9NX02 1062 aa12.5□□□□□ -0.41
COPB1-211ENST00000534234 OVOS2A0A0G2JMS6 1433 aa12.49□□□□□ -0.41
COPB1-211ENST00000534234 OVOS2A0A0J9YW53 1432 aa12.49□□□□□ -0.41
COPB1-211ENST00000534234 OVOS2Q6IE36 1432 aa12.49□□□□□ -0.41
COPB1-211ENST00000534234 NFAT5O94916 1531 aa12.49□□□□□ -0.41
COPB1-211ENST00000534234 NBPF14Q5TI25 921 aa12.49□□□□□ -0.41
COPB1-211ENST00000534234 TIMELESSQ9UNS1 1208 aa12.49□□□□□ -0.41
COPB1-211ENST00000534234 CCDC7Q96M83 1385 aa12.49□□□□□ -0.41
COPB1-211ENST00000534234 NINLQ9Y2I6 1382 aa12.49□□□□□ -0.41
COPB1-211ENST00000534234 RGPD1P0DJD0 1748 aa12.49□□□□□ -0.41
COPB1-211ENST00000534234 ERBB3P21860 1342 aa12.49□□□□□ -0.41
COPB1-211ENST00000534234 COL18A1P39060 1754 aa12.48□□□□□ -0.41
COPB1-211ENST00000534234 AKAP12Q02952 1782 aa12.48□□□□□ -0.41
COPB1-211ENST00000534234 COG3Q96JB2 828 aa12.48□□□□□ -0.41
COPB1-211ENST00000534234 BCL11BQ9C0K0 894 aaPredicted RBP12.48□□□□□ -0.41
COPB1-211ENST00000534234 USP47Q96K76 1375 aa12.48□□□□□ -0.41
COPB1-211ENST00000534234 PLSCR1O15162 318 aa12.47□□□□□ -0.41
COPB1-211ENST00000534234 PTF1AQ7RTS3 328 aa12.47□□□□□ -0.41
COPB1-211ENST00000534234 ANKRD24Q8TF21 1146 aa12.47□□□□□ -0.41
COPB1-211ENST00000534234 IP6K1Q92551 441 aa12.47□□□□□ -0.41
COPB1-211ENST00000534234 FBLN1P23142 703 aa12.46□□□□□ -0.42
COPB1-211ENST00000534234 CDCA8Q53HL2 280 aa12.46□□□□□ -0.42
COPB1-211ENST00000534234 CLSPNQ9HAW4 1339 aa12.46□□□□□ -0.42
COPB1-211ENST00000534234 MON2Q7Z3U7 1717 aa12.45□□□□□ -0.42
COPB1-211ENST00000534234 TNS1Q9HBL0 1735 aaKnown RBP12.45□□□□□ -0.42
COPB1-211ENST00000534234 PARP4Q9UKK3 1724 aaKnown RBP12.45□□□□□ -0.42
COPB1-211ENST00000534234 IL2RBP14784 551 aa12.45□□□□□ -0.42
COPB1-211ENST00000534234 LTV1Q96GA3 475 aaPredicted RBP12.45□□□□□ -0.42
COPB1-211ENST00000534234 ANKRD36BQ8N2N9 1353 aa12.45□□□□□ -0.42
COPB1-211ENST00000534234 FYB1O15117 783 aa12.44□□□□□ -0.42
COPB1-211ENST00000534234 ABCC6O95255 1503 aa12.44□□□□□ -0.42
COPB1-211ENST00000534234 BCL9O00512 1426 aa12.44□□□□□ -0.42
COPB1-211ENST00000534234 AMPHP49418 695 aa12.43□□□□□ -0.42
COPB1-211ENST00000534234 PROM2Q8N271 834 aa12.43□□□□□ -0.42
COPB1-211ENST00000534234 GGNBP2Q9H3C7 697 aa12.43□□□□□ -0.42
COPB1-211ENST00000534234 MAP3K19Q56UN5 1328 aa12.43□□□□□ -0.42
COPB1-211ENST00000534234 KCNQ2O43526 872 aa12.43□□□□□ -0.42
COPB1-211ENST00000534234 HOXC9P31274 260 aa12.42□□□□□ -0.42
COPB1-211ENST00000534234 LRRC37A3O60309 1634 aa12.42□□□□□ -0.42
COPB1-211ENST00000534234 ACSBG1Q96GR2 724 aa12.41□□□□□ -0.42
COPB1-211ENST00000534234 PEAK1Q9H792 1746 aa12.4□□□□□ -0.42
COPB1-211ENST00000534234 RRS1Q15050 365 aaKnown RBP12.4□□□□□ -0.42
COPB1-211ENST00000534234 TXNRD1Q16881 649 aa12.4□□□□□ -0.42
COPB1-211ENST00000534234 DDX54Q8TDD1 881 aaKnown RBP12.4□□□□□ -0.42
COPB1-211ENST00000534234 TNS2Q63HR2 1409 aa12.4□□□□□ -0.42
COPB1-211ENST00000534234 CARD14Q9BXL6 1004 aa12.39□□□□□ -0.43
COPB1-211ENST00000534234 USP54Q70EL1 1684 aa12.39□□□□□ -0.43
COPB1-211ENST00000534234 CCER1Q8TC90 406 aaPredicted RBP12.39□□□□□ -0.43
COPB1-211ENST00000534234 RGPD5Q99666 1765 aa12.39□□□□□ -0.43
COPB1-211ENST00000534234 SPON1Q9HCB6 807 aa12.39□□□□□ -0.43
COPB1-211ENST00000534234 ANO8Q9HCE9 1232 aaPredicted RBP12.39□□□□□ -0.43
COPB1-211ENST00000534234 LRP5O75197 1615 aa12.38□□□□□ -0.43
COPB1-211ENST00000534234 NBPF6Q5VWK0 638 aa12.37□□□□□ -0.43
COPB1-211ENST00000534234 NBPF4Q96M43 638 aa12.37□□□□□ -0.43
COPB1-211ENST00000534234 ZCRB1Q8TBF4 217 aaKnown RBP12.36□□□□□ -0.43
COPB1-211ENST00000534234 POLR3GLQ9BT43 218 aa12.36□□□□□ -0.43
COPB1-211ENST00000534234 STK32BQ9NY57 414 aa12.36□□□□□ -0.43
COPB1-211ENST00000534234 SLC15A2Q16348 729 aa12.35□□□□□ -0.43
COPB1-211ENST00000534234 HSP90AB2PQ58FF8 381 aa12.35□□□□□ -0.43
COPB1-211ENST00000534234 PPP1R1BQ9UD71 204 aaPredicted RBP12.35□□□□□ -0.43
COPB1-211ENST00000534234 RREB1Q92766 1687 aa12.35□□□□□ -0.43
COPB1-211ENST00000534234 RTL1A6NKG5 1358 aa12.35□□□□□ -0.43
COPB1-211ENST00000534234 EIF4G2P78344 907 aaKnown RBP eCLIP12.35□□□□□ -0.43
COPB1-211ENST00000534234 USHBP1Q8N6Y0 703 aa12.35□□□□□ -0.43
COPB1-211ENST00000534234 PDGFDQ9GZP0 370 aaPredicted RBP12.35□□□□□ -0.43
COPB1-211ENST00000534234 LTN1O94822 1766 aa12.34□□□□□ -0.43
COPB1-211ENST00000534234 NUP188Q5SRE5 1749 aa12.34□□□□□ -0.43
COPB1-211ENST00000534234 RAPGEF4Q8WZA2 1011 aa12.34□□□□□ -0.43
COPB1-211ENST00000534234 SYTL4Q96C24 671 aaPredicted RBP12.34□□□□□ -0.43
COPB1-211ENST00000534234 PRIM1P49642 420 aaKnown RBP12.33□□□□□ -0.44
COPB1-211ENST00000534234 EMILIN1Q9Y6C2 1016 aa12.33□□□□□ -0.44
COPB1-211ENST00000534234 NSD3Q9BZ95 1437 aa12.33□□□□□ -0.44
COPB1-211ENST00000534234 INSRP06213 1382 aa12.33□□□□□ -0.44
COPB1-211ENST00000534234 WNK3Q9BYP7 1800 aa12.32□□□□□ -0.44
COPB1-211ENST00000534234 PPM1GO15355 546 aaPredicted RBP12.32□□□□□ -0.44
COPB1-211ENST00000534234 ZBTB7AO95365 584 aa12.32□□□□□ -0.44
COPB1-211ENST00000534234 HSPA5P11021 654 aaKnown RBP12.32□□□□□ -0.44
COPB1-211ENST00000534234 FLT4P35916 1363 aa12.32□□□□□ -0.44
COPB1-211ENST00000534234 CGNL1Q0VF96 1302 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms