RNA–Protein interactions for RNA: ENST00000533438.1

CLCF1-202, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CLCF1, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-202ENST00000533438 PUS7Q96PZ0 661 aaKnown RBP16.03■□□□□ 0.16
CLCF1-202ENST00000533438 AXIN2Q9Y2T1 843 aa16.03■□□□□ 0.16
CLCF1-202ENST00000533438 LRRC37A3O60309 1634 aa16.03■□□□□ 0.16
CLCF1-202ENST00000533438 ABCC6O95255 1503 aa16.03■□□□□ 0.16
CLCF1-202ENST00000533438 USP31Q70CQ4 1352 aa16.02■□□□□ 0.16
CLCF1-202ENST00000533438 ZBTB7CA1YPR0 619 aa16.02■□□□□ 0.16
CLCF1-202ENST00000533438 PEAK1Q9H792 1746 aa16.02■□□□□ 0.15
CLCF1-202ENST00000533438 TESK2Q96S53 571 aa16.01■□□□□ 0.15
CLCF1-202ENST00000533438 LTN1O94822 1766 aa16■□□□□ 0.15
CLCF1-202ENST00000533438 WDR17Q8IZU2 1322 aa16■□□□□ 0.15
CLCF1-202ENST00000533438 PDE3BQ13370 1112 aa16■□□□□ 0.15
CLCF1-202ENST00000533438 SLC12A5Q9H2X9 1139 aa16■□□□□ 0.15
CLCF1-202ENST00000533438 SBF2Q86WG5 1849 aa16■□□□□ 0.15
CLCF1-202ENST00000533438 EDC4Q6P2E9 1401 aaKnown RBP16■□□□□ 0.15
CLCF1-202ENST00000533438 RREB1Q92766 1687 aa15.99■□□□□ 0.15
CLCF1-202ENST00000533438 ST20-MTHFSA0A0A6YYL1 179 aa15.99■□□□□ 0.15
CLCF1-202ENST00000533438 TRIM37O94972 964 aa15.99■□□□□ 0.15
CLCF1-202ENST00000533438 A0A1W2PP64 1363 aa15.99■□□□□ 0.15
CLCF1-202ENST00000533438 C11orf95C9JLR9 678 aaPredicted RBP15.98■□□□□ 0.15
CLCF1-202ENST00000533438 TOM1L2Q6ZVM7 507 aa15.98■□□□□ 0.15
CLCF1-202ENST00000533438 HDGFL2Q7Z4V5 671 aaPredicted RBP15.98■□□□□ 0.15
CLCF1-202ENST00000533438 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.98■□□□□ 0.15
CLCF1-202ENST00000533438 TMC1Q8TDI8 760 aa15.98■□□□□ 0.15
CLCF1-202ENST00000533438 SOX12O15370 315 aa15.97■□□□□ 0.15
CLCF1-202ENST00000533438 APBA3O96018 575 aa15.97■□□□□ 0.15
CLCF1-202ENST00000533438 NME9Q86XW9 330 aa15.97■□□□□ 0.15
CLCF1-202ENST00000533438 NINLQ9Y2I6 1382 aa15.97■□□□□ 0.15
CLCF1-202ENST00000533438 OVOS2A0A0J9YW53 1432 aa15.96■□□□□ 0.15
CLCF1-202ENST00000533438 OVOS2Q6IE36 1432 aa15.96■□□□□ 0.15
CLCF1-202ENST00000533438 NUP188Q5SRE5 1749 aa15.96■□□□□ 0.15
CLCF1-202ENST00000533438 OVOS2A0A0G2JMS6 1433 aa15.95■□□□□ 0.14
CLCF1-202ENST00000533438 SLC24A1O60721 1099 aa15.95■□□□□ 0.14
CLCF1-202ENST00000533438 TERF2IPQ9NYB0 399 aa15.95■□□□□ 0.14
CLCF1-202ENST00000533438 CARD10Q9BWT7 1032 aa15.94■□□□□ 0.14
CLCF1-202ENST00000533438 RGPD3A6NKT7 1758 aaPredicted RBP15.94■□□□□ 0.14
CLCF1-202ENST00000533438 RGPD4Q7Z3J3 1758 aa15.94■□□□□ 0.14
CLCF1-202ENST00000533438 DDB1Q16531 1140 aa15.93■□□□□ 0.14
CLCF1-202ENST00000533438 NBPF14Q5TI25 921 aa15.93■□□□□ 0.14
CLCF1-202ENST00000533438 CDCA7Q9BWT1 371 aaPredicted RBP15.93■□□□□ 0.14
CLCF1-202ENST00000533438 USP47Q96K76 1375 aa15.92■□□□□ 0.14
CLCF1-202ENST00000533438 CCDC7Q96M83 1385 aa15.92■□□□□ 0.14
CLCF1-202ENST00000533438 BCL9O00512 1426 aa15.92■□□□□ 0.14
CLCF1-202ENST00000533438 PLSCR1O15162 318 aa15.91■□□□□ 0.14
CLCF1-202ENST00000533438 CSB-PGBD3P0DP91 1061 aa15.91■□□□□ 0.14
CLCF1-202ENST00000533438 ERBB3P21860 1342 aa15.91■□□□□ 0.14
CLCF1-202ENST00000533438 CLSPNQ9HAW4 1339 aa15.9■□□□□ 0.14
CLCF1-202ENST00000533438 FAM208AQ9UK61 1670 aaKnown RBP15.89■□□□□ 0.13
CLCF1-202ENST00000533438 ANKRD36BQ8N2N9 1353 aa15.89■□□□□ 0.13
CLCF1-202ENST00000533438 MARCH10Q8NA82 808 aaPredicted RBP15.89■□□□□ 0.13
CLCF1-202ENST00000533438 TIMELESSQ9UNS1 1208 aa15.89■□□□□ 0.13
CLCF1-202ENST00000533438 TNS2Q63HR2 1409 aa15.88■□□□□ 0.13
CLCF1-202ENST00000533438 KCNQ2O43526 872 aa15.88■□□□□ 0.13
CLCF1-202ENST00000533438 TMF1P82094 1093 aa15.88■□□□□ 0.13
CLCF1-202ENST00000533438 SPON1Q9HCB6 807 aa15.88■□□□□ 0.13
CLCF1-202ENST00000533438 MYOM1P52179 1685 aa15.88■□□□□ 0.13
CLCF1-202ENST00000533438 ANKRD24Q8TF21 1146 aa15.86■□□□□ 0.13
CLCF1-202ENST00000533438 KIF20BQ96Q89 1820 aa15.86■□□□□ 0.13
CLCF1-202ENST00000533438 EXOC5O00471 708 aa15.85■□□□□ 0.13
CLCF1-202ENST00000533438 BCL11BQ9C0K0 894 aaPredicted RBP15.85■□□□□ 0.13
CLCF1-202ENST00000533438 NHSQ6T4R5 1651 aa15.85■□□□□ 0.13
CLCF1-202ENST00000533438 YY1P25490 414 aa15.84■□□□□ 0.13
CLCF1-202ENST00000533438 PTF1AQ7RTS3 328 aa15.84■□□□□ 0.13
CLCF1-202ENST00000533438 PROM2Q8N271 834 aa15.84■□□□□ 0.13
CLCF1-202ENST00000533438 IP6K1Q92551 441 aa15.84■□□□□ 0.13
CLCF1-202ENST00000533438 COG3Q96JB2 828 aa15.84■□□□□ 0.13
CLCF1-202ENST00000533438 NLRP2Q9NX02 1062 aa15.84■□□□□ 0.13
CLCF1-202ENST00000533438 RGPD2P0DJD1 1756 aa15.84■□□□□ 0.13
CLCF1-202ENST00000533438 IL2RBP14784 551 aa15.82■□□□□ 0.12
CLCF1-202ENST00000533438 MAP3K19Q56UN5 1328 aa15.82■□□□□ 0.12
CLCF1-202ENST00000533438 FYB1O15117 783 aa15.81■□□□□ 0.12
CLCF1-202ENST00000533438 HOXC9P31274 260 aa15.81■□□□□ 0.12
CLCF1-202ENST00000533438 CDCA8Q53HL2 280 aa15.81■□□□□ 0.12
CLCF1-202ENST00000533438 FBLN1P23142 703 aa15.8■□□□□ 0.12
CLCF1-202ENST00000533438 RTL1A6NKG5 1358 aa15.79■□□□□ 0.12
CLCF1-202ENST00000533438 GGNBP2Q9H3C7 697 aa15.79■□□□□ 0.12
CLCF1-202ENST00000533438 SHANK3Q9BYB0 1731 aa15.79■□□□□ 0.12
CLCF1-202ENST00000533438 BTAF1O14981 1849 aa15.78■□□□□ 0.12
CLCF1-202ENST00000533438 CASZ1Q86V15 1759 aa15.78■□□□□ 0.12
CLCF1-202ENST00000533438 AMPHP49418 695 aa15.77■□□□□ 0.12
CLCF1-202ENST00000533438 DCAF8L1A6NGE4 600 aa15.76■□□□□ 0.11
CLCF1-202ENST00000533438 PTGER2P43116 358 aa15.76■□□□□ 0.11
CLCF1-202ENST00000533438 RRS1Q15050 365 aaKnown RBP15.76■□□□□ 0.11
CLCF1-202ENST00000533438 CCER1Q8TC90 406 aaPredicted RBP15.76■□□□□ 0.11
CLCF1-202ENST00000533438 LTV1Q96GA3 475 aaPredicted RBP15.76■□□□□ 0.11
CLCF1-202ENST00000533438 CARD14Q9BXL6 1004 aa15.76■□□□□ 0.11
CLCF1-202ENST00000533438 ANO8Q9HCE9 1232 aaPredicted RBP15.76■□□□□ 0.11
CLCF1-202ENST00000533438 PPP1R1BQ9UD71 204 aaPredicted RBP15.76■□□□□ 0.11
CLCF1-202ENST00000533438 ACSBG1Q96GR2 724 aa15.75■□□□□ 0.11
CLCF1-202ENST00000533438 NSD3Q9BZ95 1437 aa15.75■□□□□ 0.11
CLCF1-202ENST00000533438 ANKRD26Q9UPS8 1709 aa15.74■□□□□ 0.11
CLCF1-202ENST00000533438 KAT6BQ8WYB5 2073 aa15.74■□□□□ 0.11
CLCF1-202ENST00000533438 TXNRD1Q16881 649 aa15.74■□□□□ 0.11
CLCF1-202ENST00000533438 PAPPAQ13219 1627 aa15.74■□□□□ 0.11
CLCF1-202ENST00000533438 DOT1LQ8TEK3 1739 aa15.74■□□□□ 0.11
CLCF1-202ENST00000533438 MEGF6O75095 1541 aa15.73■□□□□ 0.11
CLCF1-202ENST00000533438 UTRNP46939 3433 aa15.73■□□□□ 0.11
CLCF1-202ENST00000533438 SGIP1Q9BQI5 828 aa15.73■□□□□ 0.11
CLCF1-202ENST00000533438 PDGFDQ9GZP0 370 aaPredicted RBP15.73■□□□□ 0.11
CLCF1-202ENST00000533438 KIF24Q5T7B8 1368 aa15.73■□□□□ 0.11
CLCF1-202ENST00000533438 SLC15A2Q16348 729 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 459.5 ms