RNA–Protein interactions for RNA: ENST00000533162.1

PUF60-221, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 3

Gene PUF60, Length 761 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-221ENST00000533162 CCDC125Q86Z20 511 aa20.52■□□□□ 0.88
PUF60-221ENST00000533162 COL5A2P05997 1499 aaPredicted RBP20.51■□□□□ 0.87
PUF60-221ENST00000533162 OVOS2A0A0J9YW53 1432 aa20.51■□□□□ 0.87
PUF60-221ENST00000533162 CRB1P82279 1406 aa20.51■□□□□ 0.87
PUF60-221ENST00000533162 OVOS2Q6IE36 1432 aa20.51■□□□□ 0.87
PUF60-221ENST00000533162 CGNL1Q0VF96 1302 aa20.51■□□□□ 0.87
PUF60-221ENST00000533162 WDR17Q8IZU2 1322 aa20.51■□□□□ 0.87
PUF60-221ENST00000533162 GGNBP2Q9H3C7 697 aa20.5■□□□□ 0.87
PUF60-221ENST00000533162 AXIN2Q9Y2T1 843 aa20.5■□□□□ 0.87
PUF60-221ENST00000533162 NFAT5O94916 1531 aa20.49■□□□□ 0.87
PUF60-221ENST00000533162 ABCC6O95255 1503 aa20.49■□□□□ 0.87
PUF60-221ENST00000533162 NSD3Q9BZ95 1437 aa20.49■□□□□ 0.87
PUF60-221ENST00000533162 LMO7Q8WWI1 1683 aa20.48■□□□□ 0.87
PUF60-221ENST00000533162 AMPHP49418 695 aa20.48■□□□□ 0.87
PUF60-221ENST00000533162 CDCA7Q9BWT1 371 aaPredicted RBP20.48■□□□□ 0.87
PUF60-221ENST00000533162 CARD14Q9BXL6 1004 aa20.48■□□□□ 0.87
PUF60-221ENST00000533162 USP54Q70EL1 1684 aa20.48■□□□□ 0.87
PUF60-221ENST00000533162 PDE3BQ13370 1112 aa20.47■□□□□ 0.87
PUF60-221ENST00000533162 SF3B2Q13435 895 aaKnown RBP20.47■□□□□ 0.87
PUF60-221ENST00000533162 IP6K1Q92551 441 aa20.46■□□□□ 0.87
PUF60-221ENST00000533162 CARD10Q9BWT7 1032 aa20.46■□□□□ 0.87
PUF60-221ENST00000533162 PANK3Q9H999 370 aa20.46■□□□□ 0.87
PUF60-221ENST00000533162 C11orf95C9JLR9 678 aaPredicted RBP20.44■□□□□ 0.86
PUF60-221ENST00000533162 BLMP54132 1417 aaPredicted RBP20.44■□□□□ 0.86
PUF60-221ENST00000533162 ANKRD24Q8TF21 1146 aa20.43■□□□□ 0.86
PUF60-221ENST00000533162 NLRP2Q9NX02 1062 aa20.43■□□□□ 0.86
PUF60-221ENST00000533162 KNSTRNQ9Y448 316 aa20.43■□□□□ 0.86
PUF60-221ENST00000533162 CCDC7Q96M83 1385 aa20.43■□□□□ 0.86
PUF60-221ENST00000533162 ERBB3P21860 1342 aa20.42■□□□□ 0.86
PUF60-221ENST00000533162 MAP3K19Q56UN5 1328 aa20.42■□□□□ 0.86
PUF60-221ENST00000533162 FAM196AQ6ZSG2 479 aa20.41■□□□□ 0.86
PUF60-221ENST00000533162 KIF7Q2M1P5 1343 aa20.41■□□□□ 0.86
PUF60-221ENST00000533162 RTL1A6NKG5 1358 aa20.41■□□□□ 0.86
PUF60-221ENST00000533162 MYOM1P52179 1685 aa20.41■□□□□ 0.86
PUF60-221ENST00000533162 HOXC9P31274 260 aa20.4■□□□□ 0.86
PUF60-221ENST00000533162 COL18A1P39060 1754 aa20.39■□□□□ 0.86
PUF60-221ENST00000533162 KIF24Q5T7B8 1368 aa20.39■□□□□ 0.85
PUF60-221ENST00000533162 DDB1Q16531 1140 aa20.39■□□□□ 0.85
PUF60-221ENST00000533162 NSD2O96028 1365 aa20.38■□□□□ 0.85
PUF60-221ENST00000533162 RRS1Q15050 365 aaKnown RBP20.38■□□□□ 0.85
PUF60-221ENST00000533162 LTV1Q96GA3 475 aaPredicted RBP20.38■□□□□ 0.85
PUF60-221ENST00000533162 SMG6Q86US8 1419 aaKnown RBP20.37■□□□□ 0.85
PUF60-221ENST00000533162 EXOC5O00471 708 aa20.37■□□□□ 0.85
PUF60-221ENST00000533162 THSD7AQ9UPZ6 1657 aa20.37■□□□□ 0.85
PUF60-221ENST00000533162 FBLN1P23142 703 aa20.35■□□□□ 0.85
PUF60-221ENST00000533162 FLT4P35916 1363 aa20.34■□□□□ 0.85
PUF60-221ENST00000533162 KIF20BQ96Q89 1820 aa20.34■□□□□ 0.85
PUF60-221ENST00000533162 LTN1O94822 1766 aa20.34■□□□□ 0.85
PUF60-221ENST00000533162 PPM1GO15355 546 aaPredicted RBP20.34■□□□□ 0.85
PUF60-221ENST00000533162 IL2RBP14784 551 aa20.34■□□□□ 0.85
PUF60-221ENST00000533162 MORC1Q86VD1 984 aa20.34■□□□□ 0.85
PUF60-221ENST00000533162 BAG6P46379 1132 aa20.33■□□□□ 0.85
PUF60-221ENST00000533162 BRWD3Q6RI45 1802 aa20.32■□□□□ 0.84
PUF60-221ENST00000533162 FAM182BQ5T319 152 aa20.32■□□□□ 0.84
PUF60-221ENST00000533162 INSRP06213 1382 aa20.32■□□□□ 0.84
PUF60-221ENST00000533162 TNNT2P45379 298 aaPredicted RBP20.31■□□□□ 0.84
PUF60-221ENST00000533162 ZEB1P37275 1124 aaPredicted RBP20.3■□□□□ 0.84
PUF60-221ENST00000533162 HSP90AB2PQ58FF8 381 aa20.29■□□□□ 0.84
PUF60-221ENST00000533162 EMILIN1Q9Y6C2 1016 aa20.29■□□□□ 0.84
PUF60-221ENST00000533162 RGPD5Q99666 1765 aa20.29■□□□□ 0.84
PUF60-221ENST00000533162 WASHC2AQ641Q2 1341 aa20.28■□□□□ 0.84
PUF60-221ENST00000533162 OVOS2A0A0G2JMS6 1433 aa20.28■□□□□ 0.84
PUF60-221ENST00000533162 TRIM37O94972 964 aa20.27■□□□□ 0.84
PUF60-221ENST00000533162 POLKQ9UBT6 870 aa20.27■□□□□ 0.84
PUF60-221ENST00000533162 PARP4Q9UKK3 1724 aaKnown RBP20.27■□□□□ 0.83
PUF60-221ENST00000533162 DISP2A7MBM2 1401 aa20.27■□□□□ 0.83
PUF60-221ENST00000533162 RAPGEF4Q8WZA2 1011 aa20.26■□□□□ 0.83
PUF60-221ENST00000533162 EP400Q96L91 3159 aa20.25■□□□□ 0.83
PUF60-221ENST00000533162 AMER1Q5JTC6 1135 aaPredicted RBP20.25■□□□□ 0.83
PUF60-221ENST00000533162 FAM208AQ9UK61 1670 aaKnown RBP20.25■□□□□ 0.83
PUF60-221ENST00000533162 APBA3O96018 575 aa20.24■□□□□ 0.83
PUF60-221ENST00000533162 NBPF6Q5VWK0 638 aa20.24■□□□□ 0.83
PUF60-221ENST00000533162 MARCH10Q8NA82 808 aaPredicted RBP20.24■□□□□ 0.83
PUF60-221ENST00000533162 NBPF4Q96M43 638 aa20.24■□□□□ 0.83
PUF60-221ENST00000533162 PER1O15534 1290 aaPredicted RBP20.23■□□□□ 0.83
PUF60-221ENST00000533162 TATP17735 454 aaPredicted RBP20.23■□□□□ 0.83
PUF60-221ENST00000533162 TNS2Q63HR2 1409 aa20.23■□□□□ 0.83
PUF60-221ENST00000533162 DEFB132Q7Z7B7 95 aa20.23■□□□□ 0.83
PUF60-221ENST00000533162 BCL9O00512 1426 aa20.21■□□□□ 0.83
PUF60-221ENST00000533162 ZCRB1Q8TBF4 217 aaKnown RBP20.21■□□□□ 0.83
PUF60-221ENST00000533162 BCL11BQ9C0K0 894 aaPredicted RBP20.21■□□□□ 0.83
PUF60-221ENST00000533162 LRRC37A3O60309 1634 aa20.2■□□□□ 0.82
PUF60-221ENST00000533162 CC2D1BQ5T0F9 858 aaKnown RBP20.2■□□□□ 0.82
PUF60-221ENST00000533162 DDX54Q8TDD1 881 aaKnown RBP20.2■□□□□ 0.82
PUF60-221ENST00000533162 NPC1L1Q9UHC9 1359 aa20.2■□□□□ 0.82
PUF60-221ENST00000533162 ANKRD26Q9UPS8 1709 aa20.19■□□□□ 0.82
PUF60-221ENST00000533162 USHBP1Q8N6Y0 703 aa20.19■□□□□ 0.82
PUF60-221ENST00000533162 RGPD1P0DJD0 1748 aa20.19■□□□□ 0.82
PUF60-221ENST00000533162 EN1Q05925 392 aaPredicted RBP20.18■□□□□ 0.82
PUF60-221ENST00000533162 PARD3Q8TEW0 1356 aa20.18■□□□□ 0.82
PUF60-221ENST00000533162 WNK3Q9BYP7 1800 aa20.17■□□□□ 0.82
PUF60-221ENST00000533162 EIF4A2Q14240 407 aaKnown RBP20.16■□□□□ 0.82
PUF60-221ENST00000533162 EYA1Q99502 592 aa20.15■□□□□ 0.82
PUF60-221ENST00000533162 SPG7Q9UQ90 795 aa20.15■□□□□ 0.82
PUF60-221ENST00000533162 PEAK1Q9H792 1746 aa20.15■□□□□ 0.82
PUF60-221ENST00000533162 PLSCR1O15162 318 aa20.14■□□□□ 0.81
PUF60-221ENST00000533162 MAP2P11137 1827 aaKnown RBP20.13■□□□□ 0.81
PUF60-221ENST00000533162 PCDH11XQ9BZA7 1347 aa20.13■□□□□ 0.81
PUF60-221ENST00000533162 PCDH11YQ9BZA8 1340 aa20.13■□□□□ 0.81
PUF60-221ENST00000533162 CNGB1Q14028 1251 aaPredicted RBP20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms