RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 BLMP54132 1417 aaPredicted RBP42.37■■■■■ 4.37
SSSCA1-207ENST00000533115 AXIN2Q9Y2T1 843 aa42.37■■■■■ 4.37
SSSCA1-207ENST00000533115 THRAP3Q9Y2W1 955 aaKnown RBP42.35■■■■■ 4.37
SSSCA1-207ENST00000533115 CRB1P82279 1406 aa42.35■■■■■ 4.37
SSSCA1-207ENST00000533115 ANKRD36BQ8N2N9 1353 aa42.34■■■■■ 4.37
SSSCA1-207ENST00000533115 OVOS2A0A0J9YW53 1432 aa42.29■■■■■ 4.36
SSSCA1-207ENST00000533115 OVOS2Q6IE36 1432 aa42.29■■■■■ 4.36
SSSCA1-207ENST00000533115 WDR17Q8IZU2 1322 aa42.28■■■■■ 4.36
SSSCA1-207ENST00000533115 FAM182BQ5T319 152 aa42.28■■■■■ 4.36
SSSCA1-207ENST00000533115 TOM1L2Q6ZVM7 507 aa42.28■■■■■ 4.36
SSSCA1-207ENST00000533115 ABCC6O95255 1503 aa42.27■■■■■ 4.36
SSSCA1-207ENST00000533115 SF3B2Q13435 895 aaKnown RBP42.27■■■■■ 4.36
SSSCA1-207ENST00000533115 RGPD5Q99666 1765 aa42.27■■■■■ 4.36
SSSCA1-207ENST00000533115 CSB-PGBD3P0DP91 1061 aa42.2■■■■■ 4.35
SSSCA1-207ENST00000533115 EIF4G2P78344 907 aaKnown RBP eCLIP42.2■■■■■ 4.35
SSSCA1-207ENST00000533115 PDE3BQ13370 1112 aa42.2■■■■■ 4.35
SSSCA1-207ENST00000533115 COG3Q96JB2 828 aa42.2■■■■■ 4.35
SSSCA1-207ENST00000533115 LTN1O94822 1766 aa42.19■■■■■ 4.35
SSSCA1-207ENST00000533115 PARP4Q9UKK3 1724 aaKnown RBP42.17■■■■■ 4.34
SSSCA1-207ENST00000533115 DEFB132Q7Z7B7 95 aa42.17■■■■■ 4.34
SSSCA1-207ENST00000533115 MYOM1P52179 1685 aa42.15■■■■■ 4.34
SSSCA1-207ENST00000533115 FAM196AQ6ZSG2 479 aa42.15■■■■■ 4.34
SSSCA1-207ENST00000533115 CARD10Q9BWT7 1032 aa42.15■■■■■ 4.34
SSSCA1-207ENST00000533115 HSPA5P11021 654 aaKnown RBP42.14■■■■■ 4.34
SSSCA1-207ENST00000533115 RGPD1P0DJD0 1748 aa42.12■■■■■ 4.33
SSSCA1-207ENST00000533115 FYB1O15117 783 aa42.11■■■■■ 4.33
SSSCA1-207ENST00000533115 ERBB3P21860 1342 aa42.09■■■■■ 4.33
SSSCA1-207ENST00000533115 BAG6P46379 1132 aa42.08■■■■■ 4.33
SSSCA1-207ENST00000533115 CDCA7Q9BWT1 371 aaPredicted RBP42.08■■■■■ 4.33
SSSCA1-207ENST00000533115 WNK3Q9BYP7 1800 aa42.08■■■■■ 4.33
SSSCA1-207ENST00000533115 GGNBP2Q9H3C7 697 aa42.07■■■■■ 4.33
SSSCA1-207ENST00000533115 CCDC7Q96M83 1385 aa42.06■■■■■ 4.32
SSSCA1-207ENST00000533115 DDB1Q16531 1140 aa42.06■■■■■ 4.32
SSSCA1-207ENST00000533115 IP6K1Q92551 441 aa42.05■■■■■ 4.32
SSSCA1-207ENST00000533115 CARD14Q9BXL6 1004 aa42.05■■■■■ 4.32
SSSCA1-207ENST00000533115 LRRC37A3O60309 1634 aa42.05■■■■■ 4.32
SSSCA1-207ENST00000533115 ANKRD24Q8TF21 1146 aa42.04■■■■■ 4.32
SSSCA1-207ENST00000533115 TRIM37O94972 964 aa42.03■■■■■ 4.32
SSSCA1-207ENST00000533115 POLR3GLQ9BT43 218 aa42.02■■■■■ 4.32
SSSCA1-207ENST00000533115 DISP2A7MBM2 1401 aa42.02■■■■■ 4.32
SSSCA1-207ENST00000533115 MAP3K19Q56UN5 1328 aa42.01■■■■■ 4.32
SSSCA1-207ENST00000533115 TNS1Q9HBL0 1735 aaKnown RBP42.01■■■■■ 4.32
SSSCA1-207ENST00000533115 FBLN1P23142 703 aa42.01■■■■■ 4.32
SSSCA1-207ENST00000533115 NLRP2Q9NX02 1062 aa42.01■■■■■ 4.32
SSSCA1-207ENST00000533115 KIF20BQ96Q89 1820 aa42.01■■■■■ 4.32
SSSCA1-207ENST00000533115 NSD3Q9BZ95 1437 aa42.01■■■■■ 4.32
SSSCA1-207ENST00000533115 C11orf95C9JLR9 678 aaPredicted RBP41.98■■■■■ 4.31
SSSCA1-207ENST00000533115 AMPHP49418 695 aa41.96■■■■■ 4.31
SSSCA1-207ENST00000533115 EN1Q05925 392 aaPredicted RBP41.96■■■■■ 4.31
SSSCA1-207ENST00000533115 OVOS2A0A0G2JMS6 1433 aa41.95■■■■■ 4.31
SSSCA1-207ENST00000533115 HOXC9P31274 260 aa41.94■■■■■ 4.3
SSSCA1-207ENST00000533115 PEAK1Q9H792 1746 aa41.93■■■■■ 4.3
SSSCA1-207ENST00000533115 RRS1Q15050 365 aaKnown RBP41.92■■■■■ 4.3
SSSCA1-207ENST00000533115 EXOC5O00471 708 aa41.91■■■■■ 4.3
SSSCA1-207ENST00000533115 LTV1Q96GA3 475 aaPredicted RBP41.91■■■■■ 4.3
SSSCA1-207ENST00000533115 APBA3O96018 575 aa41.9■■■■■ 4.3
SSSCA1-207ENST00000533115 MARCH10Q8NA82 808 aaPredicted RBP41.9■■■■■ 4.3
SSSCA1-207ENST00000533115 RTL1A6NKG5 1358 aa41.89■■■■■ 4.3
SSSCA1-207ENST00000533115 FAM208AQ9UK61 1670 aaKnown RBP41.87■■■■■ 4.29
SSSCA1-207ENST00000533115 IL2RBP14784 551 aa41.86■■■■■ 4.29
SSSCA1-207ENST00000533115 CGNL1Q0VF96 1302 aa41.86■■■■■ 4.29
SSSCA1-207ENST00000533115 TNS2Q63HR2 1409 aa41.85■■■■■ 4.29
SSSCA1-207ENST00000533115 EZH2Q15910 746 aaKnown RBP41.84■■■■■ 4.29
SSSCA1-207ENST00000533115 CAMKK2Q96RR4 588 aa41.84■■■■■ 4.29
SSSCA1-207ENST00000533115 BCL9O00512 1426 aa41.81■■■■■ 4.28
SSSCA1-207ENST00000533115 SBF2Q86WG5 1849 aa41.8■■■■■ 4.28
SSSCA1-207ENST00000533115 PANK3Q9H999 370 aa41.79■■■■■ 4.28
SSSCA1-207ENST00000533115 PARD3Q8TEW0 1356 aa41.78■■■■■ 4.28
SSSCA1-207ENST00000533115 KIF24Q5T7B8 1368 aa41.77■■■■■ 4.28
SSSCA1-207ENST00000533115 FLT4P35916 1363 aa41.75■■■■■ 4.27
SSSCA1-207ENST00000533115 BCL11BQ9C0K0 894 aaPredicted RBP41.74■■■■■ 4.27
SSSCA1-207ENST00000533115 INSRP06213 1382 aa41.74■■■■■ 4.27
SSSCA1-207ENST00000533115 SMG6Q86US8 1419 aaKnown RBP41.72■■■■■ 4.27
SSSCA1-207ENST00000533115 HSP90AB2PQ58FF8 381 aa41.72■■■■■ 4.27
SSSCA1-207ENST00000533115 RGPD2P0DJD1 1756 aa41.72■■■■■ 4.27
SSSCA1-207ENST00000533115 EMILIN1Q9Y6C2 1016 aa41.71■■■■■ 4.27
SSSCA1-207ENST00000533115 NBPF6Q5VWK0 638 aa41.68■■■■■ 4.26
SSSCA1-207ENST00000533115 PTF1AQ7RTS3 328 aa41.68■■■■■ 4.26
SSSCA1-207ENST00000533115 NBPF4Q96M43 638 aa41.68■■■■■ 4.26
SSSCA1-207ENST00000533115 RREB1Q92766 1687 aa41.68■■■■■ 4.26
SSSCA1-207ENST00000533115 ANKRD26Q9UPS8 1709 aa41.66■■■■■ 4.26
SSSCA1-207ENST00000533115 KIF7Q2M1P5 1343 aa41.66■■■■■ 4.26
SSSCA1-207ENST00000533115 PSDA5PKW4 1024 aaPredicted RBP41.65■■■■■ 4.26
SSSCA1-207ENST00000533115 PLSCR1O15162 318 aa41.64■■■■■ 4.26
SSSCA1-207ENST00000533115 SRCAPQ6ZRS2 3230 aa41.64■■■■■ 4.26
SSSCA1-207ENST00000533115 PPM1GO15355 546 aaPredicted RBP41.63■■■■■ 4.25
SSSCA1-207ENST00000533115 MAP2P11137 1827 aaKnown RBP41.62■■■■■ 4.25
SSSCA1-207ENST00000533115 USHBP1Q8N6Y0 703 aa41.61■■■■■ 4.25
SSSCA1-207ENST00000533115 RGPD3A6NKT7 1758 aaPredicted RBP41.6■■■■■ 4.25
SSSCA1-207ENST00000533115 RGPD4Q7Z3J3 1758 aa41.6■■■■■ 4.25
SSSCA1-207ENST00000533115 NUP188Q5SRE5 1749 aa41.6■■■■■ 4.25
SSSCA1-207ENST00000533115 NSD2O96028 1365 aa41.6■■■■■ 4.25
SSSCA1-207ENST00000533115 POLKQ9UBT6 870 aa41.59■■■■■ 4.25
SSSCA1-207ENST00000533115 MEGF6O75095 1541 aa41.59■■■■■ 4.25
SSSCA1-207ENST00000533115 KCNQ2O43526 872 aa41.58■■■■■ 4.25
SSSCA1-207ENST00000533115 TNNT2P45379 298 aaPredicted RBP41.58■■■■■ 4.25
SSSCA1-207ENST00000533115 R3HDM1Q15032 1099 aaKnown RBP41.58■■■■■ 4.25
SSSCA1-207ENST00000533115 DDX54Q8TDD1 881 aaKnown RBP41.58■■■■■ 4.25
SSSCA1-207ENST00000533115 ACSBG1Q96GR2 724 aa41.58■■■■■ 4.25
SSSCA1-207ENST00000533115 WASHC2AQ641Q2 1341 aa41.58■■■■■ 4.25
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms