RNA–Protein interactions for RNA: ENST00000532771.5

SYVN1-214, Transcript of synoviolin 1, humanhuman

TSL 3

Gene SYVN1, Length 709 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-214ENST00000532771 TERF2IPQ9NYB0 399 aa13.46□□□□□ -0.25
SYVN1-214ENST00000532771 EDC4Q6P2E9 1401 aaKnown RBP13.46□□□□□ -0.26
SYVN1-214ENST00000532771 TNS1Q9HBL0 1735 aaKnown RBP13.45□□□□□ -0.26
SYVN1-214ENST00000532771 PARP4Q9UKK3 1724 aaKnown RBP13.45□□□□□ -0.26
SYVN1-214ENST00000532771 USP54Q70EL1 1684 aa13.45□□□□□ -0.26
SYVN1-214ENST00000532771 TRIM37O94972 964 aa13.45□□□□□ -0.26
SYVN1-214ENST00000532771 EN1Q05925 392 aaPredicted RBP13.45□□□□□ -0.26
SYVN1-214ENST00000532771 TOM1L2Q6ZVM7 507 aa13.45□□□□□ -0.26
SYVN1-214ENST00000532771 NME9Q86XW9 330 aa13.45□□□□□ -0.26
SYVN1-214ENST00000532771 A0A1W2PP64 1363 aa13.45□□□□□ -0.26
SYVN1-214ENST00000532771 NINLQ9Y2I6 1382 aa13.45□□□□□ -0.26
SYVN1-214ENST00000532771 ABCC6O95255 1503 aa13.44□□□□□ -0.26
SYVN1-214ENST00000532771 USP47Q96K76 1375 aa13.43□□□□□ -0.26
SYVN1-214ENST00000532771 CLSPNQ9HAW4 1339 aa13.42□□□□□ -0.26
SYVN1-214ENST00000532771 C11orf95C9JLR9 678 aaPredicted RBP13.42□□□□□ -0.26
SYVN1-214ENST00000532771 TIMELESSQ9UNS1 1208 aa13.42□□□□□ -0.26
SYVN1-214ENST00000532771 CSB-PGBD3P0DP91 1061 aa13.41□□□□□ -0.26
SYVN1-214ENST00000532771 DDB1Q16531 1140 aa13.41□□□□□ -0.26
SYVN1-214ENST00000532771 CAMKK2Q96RR4 588 aa13.41□□□□□ -0.26
SYVN1-214ENST00000532771 CDCA7Q9BWT1 371 aaPredicted RBP13.41□□□□□ -0.26
SYVN1-214ENST00000532771 CARD10Q9BWT7 1032 aa13.41□□□□□ -0.26
SYVN1-214ENST00000532771 LRRC37A3O60309 1634 aa13.41□□□□□ -0.26
SYVN1-214ENST00000532771 PARD3Q8TEW0 1356 aa13.41□□□□□ -0.26
SYVN1-214ENST00000532771 RGPD5Q99666 1765 aa13.4□□□□□ -0.26
SYVN1-214ENST00000532771 OVOS2A0A0G2JMS6 1433 aa13.4□□□□□ -0.26
SYVN1-214ENST00000532771 OVOS2A0A0J9YW53 1432 aa13.4□□□□□ -0.26
SYVN1-214ENST00000532771 OVOS2Q6IE36 1432 aa13.4□□□□□ -0.26
SYVN1-214ENST00000532771 APBA3O96018 575 aa13.4□□□□□ -0.26
SYVN1-214ENST00000532771 EZH2Q15910 746 aaKnown RBP13.4□□□□□ -0.26
SYVN1-214ENST00000532771 PEAK1Q9H792 1746 aa13.39□□□□□ -0.27
SYVN1-214ENST00000532771 WNK3Q9BYP7 1800 aa13.39□□□□□ -0.27
SYVN1-214ENST00000532771 TMF1P82094 1093 aa13.39□□□□□ -0.27
SYVN1-214ENST00000532771 PCGF6Q9BYE7 350 aa13.39□□□□□ -0.27
SYVN1-214ENST00000532771 CCDC7Q96M83 1385 aa13.39□□□□□ -0.27
SYVN1-214ENST00000532771 ERBB3P21860 1342 aa13.39□□□□□ -0.27
SYVN1-214ENST00000532771 ANKRD36BQ8N2N9 1353 aa13.38□□□□□ -0.27
SYVN1-214ENST00000532771 PSDA5PKW4 1024 aaPredicted RBP13.38□□□□□ -0.27
SYVN1-214ENST00000532771 LTN1O94822 1766 aa13.37□□□□□ -0.27
SYVN1-214ENST00000532771 BCL9O00512 1426 aa13.37□□□□□ -0.27
SYVN1-214ENST00000532771 MARCH10Q8NA82 808 aaPredicted RBP13.36□□□□□ -0.27
SYVN1-214ENST00000532771 R3HDM1Q15032 1099 aaKnown RBP13.35□□□□□ -0.27
SYVN1-214ENST00000532771 CDCA8Q53HL2 280 aa13.35□□□□□ -0.27
SYVN1-214ENST00000532771 COG3Q96JB2 828 aa13.35□□□□□ -0.27
SYVN1-214ENST00000532771 NLRP2Q9NX02 1062 aa13.35□□□□□ -0.27
SYVN1-214ENST00000532771 LRP5O75197 1615 aa13.35□□□□□ -0.27
SYVN1-214ENST00000532771 RREB1Q92766 1687 aa13.34□□□□□ -0.27
SYVN1-214ENST00000532771 EXOC5O00471 708 aa13.34□□□□□ -0.27
SYVN1-214ENST00000532771 ANKRD24Q8TF21 1146 aa13.34□□□□□ -0.27
SYVN1-214ENST00000532771 IP6K1Q92551 441 aa13.34□□□□□ -0.27
SYVN1-214ENST00000532771 TNS2Q63HR2 1409 aa13.33□□□□□ -0.28
SYVN1-214ENST00000532771 BCL11BQ9C0K0 894 aaPredicted RBP13.33□□□□□ -0.28
SYVN1-214ENST00000532771 SBF2Q86WG5 1849 aa13.33□□□□□ -0.28
SYVN1-214ENST00000532771 PLSCR1O15162 318 aa13.32□□□□□ -0.28
SYVN1-214ENST00000532771 IL2RBP14784 551 aa13.32□□□□□ -0.28
SYVN1-214ENST00000532771 PTF1AQ7RTS3 328 aa13.32□□□□□ -0.28
SYVN1-214ENST00000532771 NUP188Q5SRE5 1749 aa13.32□□□□□ -0.28
SYVN1-214ENST00000532771 MAP3K19Q56UN5 1328 aa13.32□□□□□ -0.28
SYVN1-214ENST00000532771 SRCAPQ6ZRS2 3230 aa13.31□□□□□ -0.28
SYVN1-214ENST00000532771 RGPD3A6NKT7 1758 aaPredicted RBP13.31□□□□□ -0.28
SYVN1-214ENST00000532771 RGPD4Q7Z3J3 1758 aa13.31□□□□□ -0.28
SYVN1-214ENST00000532771 FYB1O15117 783 aa13.31□□□□□ -0.28
SYVN1-214ENST00000532771 FBLN1P23142 703 aa13.3□□□□□ -0.28
SYVN1-214ENST00000532771 HOXC9P31274 260 aa13.3□□□□□ -0.28
SYVN1-214ENST00000532771 NBPF14Q5TI25 921 aa13.3□□□□□ -0.28
SYVN1-214ENST00000532771 FAM208AQ9UK61 1670 aaKnown RBP13.29□□□□□ -0.28
SYVN1-214ENST00000532771 AMPHP49418 695 aa13.29□□□□□ -0.28
SYVN1-214ENST00000532771 LTV1Q96GA3 475 aaPredicted RBP13.29□□□□□ -0.28
SYVN1-214ENST00000532771 GGNBP2Q9H3C7 697 aa13.29□□□□□ -0.28
SYVN1-214ENST00000532771 RTL1A6NKG5 1358 aa13.29□□□□□ -0.28
SYVN1-214ENST00000532771 MYOM1P52179 1685 aa13.28□□□□□ -0.28
SYVN1-214ENST00000532771 RRS1Q15050 365 aaKnown RBP13.27□□□□□ -0.29
SYVN1-214ENST00000532771 CCER1Q8TC90 406 aaPredicted RBP13.27□□□□□ -0.29
SYVN1-214ENST00000532771 CARD14Q9BXL6 1004 aa13.27□□□□□ -0.29
SYVN1-214ENST00000532771 PROM2Q8N271 834 aa13.26□□□□□ -0.29
SYVN1-214ENST00000532771 KIF20BQ96Q89 1820 aa13.25□□□□□ -0.29
SYVN1-214ENST00000532771 NHSQ6T4R5 1651 aa13.25□□□□□ -0.29
SYVN1-214ENST00000532771 NSD3Q9BZ95 1437 aa13.25□□□□□ -0.29
SYVN1-214ENST00000532771 KCNQ2O43526 872 aa13.25□□□□□ -0.29
SYVN1-214ENST00000532771 KIF24Q5T7B8 1368 aa13.24□□□□□ -0.29
SYVN1-214ENST00000532771 TXNRD1Q16881 649 aa13.24□□□□□ -0.29
SYVN1-214ENST00000532771 ACSBG1Q96GR2 724 aa13.24□□□□□ -0.29
SYVN1-214ENST00000532771 ANO8Q9HCE9 1232 aaPredicted RBP13.24□□□□□ -0.29
SYVN1-214ENST00000532771 EIF4G2P78344 907 aaKnown RBP eCLIP13.23□□□□□ -0.29
SYVN1-214ENST00000532771 SMG6Q86US8 1419 aaKnown RBP13.22□□□□□ -0.29
SYVN1-214ENST00000532771 INSRP06213 1382 aa13.22□□□□□ -0.29
SYVN1-214ENST00000532771 FLT4P35916 1363 aa13.22□□□□□ -0.29
SYVN1-214ENST00000532771 HSP90AB2PQ58FF8 381 aa13.22□□□□□ -0.29
SYVN1-214ENST00000532771 NBPF6Q5VWK0 638 aa13.22□□□□□ -0.29
SYVN1-214ENST00000532771 DDX54Q8TDD1 881 aaKnown RBP13.22□□□□□ -0.29
SYVN1-214ENST00000532771 NBPF4Q96M43 638 aa13.22□□□□□ -0.29
SYVN1-214ENST00000532771 MEGF6O75095 1541 aa13.22□□□□□ -0.29
SYVN1-214ENST00000532771 RGPD2P0DJD1 1756 aa13.22□□□□□ -0.29
SYVN1-214ENST00000532771 CGNL1Q0VF96 1302 aa13.21□□□□□ -0.29
SYVN1-214ENST00000532771 HSPA5P11021 654 aaKnown RBP13.21□□□□□ -0.29
SYVN1-214ENST00000532771 ZCRB1Q8TBF4 217 aaKnown RBP13.2□□□□□ -0.3
SYVN1-214ENST00000532771 SPON1Q9HCB6 807 aa13.2□□□□□ -0.3
SYVN1-214ENST00000532771 BTAF1O14981 1849 aa13.19□□□□□ -0.3
SYVN1-214ENST00000532771 USHBP1Q8N6Y0 703 aa13.19□□□□□ -0.3
SYVN1-214ENST00000532771 POLR3GLQ9BT43 218 aa13.19□□□□□ -0.3
SYVN1-214ENST00000532771 STK32BQ9NY57 414 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms