RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 EDC4Q6P2E9 1401 aaKnown RBP25.17■■□□□ 1.62
SMG1-203ENST00000532700 PEAK1Q9H792 1746 aa25.17■■□□□ 1.62
SMG1-203ENST00000532700 MYOM1P52179 1685 aa25.17■■□□□ 1.62
SMG1-203ENST00000532700 OVOS2A0A0J9YW53 1432 aa25.15■■□□□ 1.62
SMG1-203ENST00000532700 OVOS2Q6IE36 1432 aa25.15■■□□□ 1.62
SMG1-203ENST00000532700 PUS7Q96PZ0 661 aaKnown RBP25.12■■□□□ 1.61
SMG1-203ENST00000532700 WDR17Q8IZU2 1322 aa25.12■■□□□ 1.61
SMG1-203ENST00000532700 HDGFL2Q7Z4V5 671 aaPredicted RBP25.11■■□□□ 1.61
SMG1-203ENST00000532700 KCNH5Q8NCM2 988 aa25.11■■□□□ 1.61
SMG1-203ENST00000532700 ABCC6O95255 1503 aa25.11■■□□□ 1.61
SMG1-203ENST00000532700 SBF2Q86WG5 1849 aa25.1■■□□□ 1.61
SMG1-203ENST00000532700 EN1Q05925 392 aaPredicted RBP25.1■■□□□ 1.61
SMG1-203ENST00000532700 SF3B2Q13435 895 aaKnown RBP25.1■■□□□ 1.61
SMG1-203ENST00000532700 TRIM37O94972 964 aa25.09■■□□□ 1.61
SMG1-203ENST00000532700 TOM1L2Q6ZVM7 507 aa25.09■■□□□ 1.61
SMG1-203ENST00000532700 TERF2IPQ9NYB0 399 aa25.08■■□□□ 1.61
SMG1-203ENST00000532700 THRAP3Q9Y2W1 955 aaKnown RBP25.08■■□□□ 1.61
SMG1-203ENST00000532700 DISP2A7MBM2 1401 aa25.08■■□□□ 1.61
SMG1-203ENST00000532700 CLSPNQ9HAW4 1339 aa25.07■■□□□ 1.6
SMG1-203ENST00000532700 RREB1Q92766 1687 aa25.07■■□□□ 1.6
SMG1-203ENST00000532700 NINLQ9Y2I6 1382 aa25.05■■□□□ 1.6
SMG1-203ENST00000532700 FBLN1P23142 703 aa25.05■■□□□ 1.6
SMG1-203ENST00000532700 ANKRD36BQ8N2N9 1353 aa25.05■■□□□ 1.6
SMG1-203ENST00000532700 BAG6P46379 1132 aa25.04■■□□□ 1.6
SMG1-203ENST00000532700 PDE3BQ13370 1112 aa25.04■■□□□ 1.6
SMG1-203ENST00000532700 FAM196AQ6ZSG2 479 aa25.04■■□□□ 1.6
SMG1-203ENST00000532700 KIF20BQ96Q89 1820 aa25.04■■□□□ 1.6
SMG1-203ENST00000532700 NUP188Q5SRE5 1749 aa25.03■■□□□ 1.6
SMG1-203ENST00000532700 EZH2Q15910 746 aaKnown RBP25.03■■□□□ 1.6
SMG1-203ENST00000532700 RGPD2P0DJD1 1756 aa25.03■■□□□ 1.6
SMG1-203ENST00000532700 TMF1P82094 1093 aa25.01■■□□□ 1.59
SMG1-203ENST00000532700 PTF1AQ7RTS3 328 aa25.01■■□□□ 1.59
SMG1-203ENST00000532700 TIMELESSQ9UNS1 1208 aa25.01■■□□□ 1.59
SMG1-203ENST00000532700 ERBB3P21860 1342 aa25.01■■□□□ 1.59
SMG1-203ENST00000532700 CSB-PGBD3P0DP91 1061 aa25■■□□□ 1.59
SMG1-203ENST00000532700 CARD10Q9BWT7 1032 aa25■■□□□ 1.59
SMG1-203ENST00000532700 PSDA5PKW4 1024 aaPredicted RBP24.99■■□□□ 1.59
SMG1-203ENST00000532700 CAMKK2Q96RR4 588 aa24.99■■□□□ 1.59
SMG1-203ENST00000532700 SRCAPQ6ZRS2 3230 aa24.99■■□□□ 1.59
SMG1-203ENST00000532700 OVOS2A0A0G2JMS6 1433 aa24.98■■□□□ 1.59
SMG1-203ENST00000532700 MARCH10Q8NA82 808 aaPredicted RBP24.98■■□□□ 1.59
SMG1-203ENST00000532700 DDB1Q16531 1140 aa24.97■■□□□ 1.59
SMG1-203ENST00000532700 CCER1Q8TC90 406 aaPredicted RBP24.97■■□□□ 1.59
SMG1-203ENST00000532700 FAM208AQ9UK61 1670 aaKnown RBP24.97■■□□□ 1.59
SMG1-203ENST00000532700 APBA3O96018 575 aa24.96■■□□□ 1.59
SMG1-203ENST00000532700 ANKRD24Q8TF21 1146 aa24.95■■□□□ 1.58
SMG1-203ENST00000532700 MAP3K19Q56UN5 1328 aa24.94■■□□□ 1.58
SMG1-203ENST00000532700 FYB1O15117 783 aa24.94■■□□□ 1.58
SMG1-203ENST00000532700 CARD14Q9BXL6 1004 aa24.94■■□□□ 1.58
SMG1-203ENST00000532700 GGNBP2Q9H3C7 697 aa24.94■■□□□ 1.58
SMG1-203ENST00000532700 TNS2Q63HR2 1409 aa24.94■■□□□ 1.58
SMG1-203ENST00000532700 CCDC7Q96M83 1385 aa24.93■■□□□ 1.58
SMG1-203ENST00000532700 NLRP2Q9NX02 1062 aa24.92■■□□□ 1.58
SMG1-203ENST00000532700 LRP5O75197 1615 aa24.91■■□□□ 1.58
SMG1-203ENST00000532700 RGPD3A6NKT7 1758 aaPredicted RBP24.91■■□□□ 1.58
SMG1-203ENST00000532700 RGPD4Q7Z3J3 1758 aa24.91■■□□□ 1.58
SMG1-203ENST00000532700 COG3Q96JB2 828 aa24.91■■□□□ 1.58
SMG1-203ENST00000532700 SHANK3Q9BYB0 1731 aa24.9■■□□□ 1.58
SMG1-203ENST00000532700 SLC24A1O60721 1099 aa24.9■■□□□ 1.58
SMG1-203ENST00000532700 IP6K1Q92551 441 aa24.9■■□□□ 1.58
SMG1-203ENST00000532700 NSD3Q9BZ95 1437 aa24.89■■□□□ 1.58
SMG1-203ENST00000532700 R3HDM1Q15032 1099 aaKnown RBP24.89■■□□□ 1.58
SMG1-203ENST00000532700 RRS1Q15050 365 aaKnown RBP24.89■■□□□ 1.58
SMG1-203ENST00000532700 LTV1Q96GA3 475 aaPredicted RBP24.89■■□□□ 1.58
SMG1-203ENST00000532700 NHSQ6T4R5 1651 aa24.88■■□□□ 1.57
SMG1-203ENST00000532700 HOXC9P31274 260 aa24.88■■□□□ 1.57
SMG1-203ENST00000532700 CDCA7Q9BWT1 371 aaPredicted RBP24.87■■□□□ 1.57
SMG1-203ENST00000532700 BCL9O00512 1426 aa24.86■■□□□ 1.57
SMG1-203ENST00000532700 HSPA5P11021 654 aaKnown RBP24.86■■□□□ 1.57
SMG1-203ENST00000532700 PARD3Q8TEW0 1356 aa24.84■■□□□ 1.57
SMG1-203ENST00000532700 ANKRD26Q9UPS8 1709 aa24.83■■□□□ 1.57
SMG1-203ENST00000532700 EXOC5O00471 708 aa24.83■■□□□ 1.57
SMG1-203ENST00000532700 CDCA8Q53HL2 280 aa24.83■■□□□ 1.57
SMG1-203ENST00000532700 MEGF6O75095 1541 aa24.82■■□□□ 1.56
SMG1-203ENST00000532700 KCNQ2O43526 872 aa24.82■■□□□ 1.56
SMG1-203ENST00000532700 IL2RBP14784 551 aa24.82■■□□□ 1.56
SMG1-203ENST00000532700 BTAF1O14981 1849 aa24.82■■□□□ 1.56
SMG1-203ENST00000532700 AMPHP49418 695 aa24.81■■□□□ 1.56
SMG1-203ENST00000532700 BCL11BQ9C0K0 894 aaPredicted RBP24.81■■□□□ 1.56
SMG1-203ENST00000532700 RTL1A6NKG5 1358 aa24.8■■□□□ 1.56
SMG1-203ENST00000532700 C11orf95C9JLR9 678 aaPredicted RBP24.8■■□□□ 1.56
SMG1-203ENST00000532700 PROM2Q8N271 834 aa24.8■■□□□ 1.56
SMG1-203ENST00000532700 POLR3GLQ9BT43 218 aa24.8■■□□□ 1.56
SMG1-203ENST00000532700 ACSBG1Q96GR2 724 aa24.79■■□□□ 1.56
SMG1-203ENST00000532700 USHBP1Q8N6Y0 703 aa24.78■■□□□ 1.56
SMG1-203ENST00000532700 DOT1LQ8TEK3 1739 aa24.78■■□□□ 1.56
SMG1-203ENST00000532700 EIF4G2P78344 907 aaKnown RBP eCLIP24.77■■□□□ 1.56
SMG1-203ENST00000532700 ANO8Q9HCE9 1232 aaPredicted RBP24.77■■□□□ 1.56
SMG1-203ENST00000532700 EMILIN1Q9Y6C2 1016 aa24.77■■□□□ 1.56
SMG1-203ENST00000532700 MAP2P11137 1827 aaKnown RBP24.77■■□□□ 1.56
SMG1-203ENST00000532700 HSP90AB2PQ58FF8 381 aa24.76■■□□□ 1.55
SMG1-203ENST00000532700 NBPF6Q5VWK0 638 aa24.76■■□□□ 1.55
SMG1-203ENST00000532700 NBPF4Q96M43 638 aa24.76■■□□□ 1.55
SMG1-203ENST00000532700 CASZ1Q86V15 1759 aa24.75■■□□□ 1.55
SMG1-203ENST00000532700 PLSCR1O15162 318 aa24.74■■□□□ 1.55
SMG1-203ENST00000532700 INSRP06213 1382 aa24.72■■□□□ 1.55
SMG1-203ENST00000532700 PAPPAQ13219 1627 aa24.72■■□□□ 1.55
SMG1-203ENST00000532700 FLT4P35916 1363 aa24.71■■□□□ 1.55
SMG1-203ENST00000532700 DDX54Q8TDD1 881 aaKnown RBP24.7■■□□□ 1.54
SMG1-203ENST00000532700 PDGFDQ9GZP0 370 aaPredicted RBP24.69■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms