RNA–Protein interactions for RNA: ENST00000532348.1

SUSD1-210, Transcript of sushi domain containing 1, humanhuman

TSL 3

Gene SUSD1, Length 526 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD1-210ENST00000532348 TBC1D9Q6ZT07 1266 aa6.62□□□□□ -1.35
SUSD1-210ENST00000532348 TICAM2Q86XR7 235 aa6.62□□□□□ -1.35
SUSD1-210ENST00000532348 ZBTB3Q9H5J0 574 aa6.62□□□□□ -1.35
SUSD1-210ENST00000532348 SLC27A5Q9Y2P5 690 aa6.62□□□□□ -1.35
SUSD1-210ENST00000532348 ACTN4O43707 911 aaKnown RBP6.61□□□□□ -1.35
SUSD1-210ENST00000532348 MARCH6O60337 910 aa6.61□□□□□ -1.35
SUSD1-210ENST00000532348 ATP6V1AP38606 617 aa6.61□□□□□ -1.35
SUSD1-210ENST00000532348 IRX6P78412 446 aaPredicted RBP6.61□□□□□ -1.35
SUSD1-210ENST00000532348 TRAF7Q6Q0C0 670 aa6.61□□□□□ -1.35
SUSD1-210ENST00000532348 BLOC1S3Q6QNY0 202 aa6.61□□□□□ -1.35
SUSD1-210ENST00000532348 NOL8Q76FK4 1167 aaKnown RBP6.61□□□□□ -1.35
SUSD1-210ENST00000532348 NPAS4Q8IUM7 802 aa6.61□□□□□ -1.35
SUSD1-210ENST00000532348 BCL11AQ9H165 835 aa6.61□□□□□ -1.35
SUSD1-210ENST00000532348 NOVA2Q9UNW9 492 aaKnown RBP6.61□□□□□ -1.35
SUSD1-210ENST00000532348 MTMR2Q13614 643 aa6.6□□□□□ -1.35
SUSD1-210ENST00000532348 KMT5BQ4FZB7 885 aa6.6□□□□□ -1.35
SUSD1-210ENST00000532348 BIN2Q9UBW5 565 aaPredicted RBP6.6□□□□□ -1.35
SUSD1-210ENST00000532348 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.6□□□□□ -1.35
SUSD1-210ENST00000532348 ANKRD33BA6NCL7 494 aa6.59□□□□□ -1.35
SUSD1-210ENST00000532348 C6orf229H3BNL8 230 aa6.59□□□□□ -1.35
SUSD1-210ENST00000532348 SSFA2P28290 1259 aa6.59□□□□□ -1.35
SUSD1-210ENST00000532348 CTDSPL2Q05D32 466 aa6.59□□□□□ -1.35
SUSD1-210ENST00000532348 NYAP1Q6ZVC0 841 aa6.59□□□□□ -1.35
SUSD1-210ENST00000532348 HELBQ8NG08 1087 aaPredicted RBP6.59□□□□□ -1.35
SUSD1-210ENST00000532348 LRRN4Q8WUT4 740 aa6.59□□□□□ -1.35
SUSD1-210ENST00000532348 TSR3Q9UJK0 312 aaKnown RBP6.59□□□□□ -1.35
SUSD1-210ENST00000532348 PER1O15534 1290 aaPredicted RBP6.58□□□□□ -1.36
SUSD1-210ENST00000532348 RECKO95980 971 aa6.58□□□□□ -1.36
SUSD1-210ENST00000532348 SERPINB4P48594 390 aa6.58□□□□□ -1.36
SUSD1-210ENST00000532348 SLC4A3P48751 1232 aa6.58□□□□□ -1.36
SUSD1-210ENST00000532348 PPP4CP60510 307 aa6.58□□□□□ -1.36
SUSD1-210ENST00000532348 TAGLNQ01995 201 aaKnown RBP6.58□□□□□ -1.36
SUSD1-210ENST00000532348 KANK4Q5T7N3 995 aaPredicted RBP6.58□□□□□ -1.36
SUSD1-210ENST00000532348 PNMA1Q8ND90 353 aa6.58□□□□□ -1.36
SUSD1-210ENST00000532348 EPS8L1Q8TE68 723 aa6.58□□□□□ -1.36
SUSD1-210ENST00000532348 TSC1Q92574 1164 aa6.58□□□□□ -1.36
SUSD1-210ENST00000532348 PRDM16Q9HAZ2 1276 aa6.58□□□□□ -1.36
SUSD1-210ENST00000532348 LCE2BO14633 110 aa6.57□□□□□ -1.36
SUSD1-210ENST00000532348 EIF4G2P78344 907 aaKnown RBP eCLIP6.57□□□□□ -1.36
SUSD1-210ENST00000532348 DPH6Q7L8W6 267 aa6.57□□□□□ -1.36
SUSD1-210ENST00000532348 THAP11Q96EK4 314 aa6.57□□□□□ -1.36
SUSD1-210ENST00000532348 TLL1O43897 1013 aa6.56□□□□□ -1.36
SUSD1-210ENST00000532348 GFRA3O60609 400 aa6.56□□□□□ -1.36
SUSD1-210ENST00000532348 COPS2P61201 443 aa6.56□□□□□ -1.36
SUSD1-210ENST00000532348 KCNC4Q03721 635 aa6.56□□□□□ -1.36
SUSD1-210ENST00000532348 BCCIPQ9P287 314 aaKnown RBP eCLIP6.56□□□□□ -1.36
SUSD1-210ENST00000532348 PCDHB3Q9Y5E6 796 aa6.56□□□□□ -1.36
SUSD1-210ENST00000532348 FAM196BA6NMK8 535 aa6.55□□□□□ -1.36
SUSD1-210ENST00000532348 BRICD5Q6PL45 260 aa6.55□□□□□ -1.36
SUSD1-210ENST00000532348 MICAL1Q8TDZ2 1067 aa6.55□□□□□ -1.36
SUSD1-210ENST00000532348 CLP1Q92989 425 aaKnown RBP6.55□□□□□ -1.36
SUSD1-210ENST00000532348 PRDM9Q9NQV7 894 aa6.55□□□□□ -1.36
SUSD1-210ENST00000532348 LOC102724159A0A0B4J2E5 919 aa6.54□□□□□ -1.36
SUSD1-210ENST00000532348 USP17L3A6NCW0 530 aa6.54□□□□□ -1.36
SUSD1-210ENST00000532348 USP17L4A6NCW7 530 aa6.54□□□□□ -1.36
SUSD1-210ENST00000532348 USP17L15C9J2P7 530 aa6.54□□□□□ -1.36
SUSD1-210ENST00000532348 USP17L10C9JJH3 530 aa6.54□□□□□ -1.36
SUSD1-210ENST00000532348 USP17L13C9JLJ4 530 aa6.54□□□□□ -1.36
SUSD1-210ENST00000532348 USP17L12C9JPN9 530 aa6.54□□□□□ -1.36
SUSD1-210ENST00000532348 USP17L11C9JVI0 530 aa6.54□□□□□ -1.36
SUSD1-210ENST00000532348 USP17L21D6R901 530 aa6.54□□□□□ -1.36
SUSD1-210ENST00000532348 USP17L18D6R9N7 530 aa6.54□□□□□ -1.36
SUSD1-210ENST00000532348 USP17L22D6RA61 530 aa6.54□□□□□ -1.36
SUSD1-210ENST00000532348 USP17L17D6RBQ6 530 aa6.54□□□□□ -1.36
SUSD1-210ENST00000532348 USP17L19D6RCP7 530 aa6.54□□□□□ -1.36
SUSD1-210ENST00000532348 USP17L20D6RJB6 530 aa6.54□□□□□ -1.36
SUSD1-210ENST00000532348 ATP2B4P23634 1241 aa6.54□□□□□ -1.36
SUSD1-210ENST00000532348 ERCC5P28715 1186 aaPredicted RBP6.54□□□□□ -1.36
SUSD1-210ENST00000532348 USP17L24Q0WX57 530 aa6.54□□□□□ -1.36
SUSD1-210ENST00000532348 PWP2Q15269 919 aaKnown RBP6.54□□□□□ -1.36
SUSD1-210ENST00000532348 GRIPAP1Q4V328 841 aa6.54□□□□□ -1.36
SUSD1-210ENST00000532348 USP17L2Q6R6M4 530 aa6.54□□□□□ -1.36
SUSD1-210ENST00000532348 USP17L1Q7RTZ2 530 aa6.54□□□□□ -1.36
SUSD1-210ENST00000532348 RETREG3Q86VR2 466 aa6.54□□□□□ -1.36
SUSD1-210ENST00000532348 SCUBE3Q8IX30 993 aa6.54□□□□□ -1.36
SUSD1-210ENST00000532348 NFATC2IPQ8NCF5 419 aa6.54□□□□□ -1.36
SUSD1-210ENST00000532348 RIPOR2Q9Y4F9 1068 aa6.54□□□□□ -1.36
SUSD1-210ENST00000532348 RAB11FIP3O75154 756 aa6.53□□□□□ -1.36
SUSD1-210ENST00000532348 CLSTN1O94985 981 aa6.53□□□□□ -1.36
SUSD1-210ENST00000532348 TSNAXIP1Q2TAA8 658 aa6.53□□□□□ -1.36
SUSD1-210ENST00000532348 FBXO33Q7Z6M2 555 aa6.53□□□□□ -1.36
SUSD1-210ENST00000532348 PLEKHM2Q8IWE5 1019 aa6.53□□□□□ -1.36
SUSD1-210ENST00000532348 SLAIN2Q9P270 581 aa6.53□□□□□ -1.36
SUSD1-210ENST00000532348 PPME1Q9Y570 386 aa6.53□□□□□ -1.36
SUSD1-210ENST00000532348 USP17L5A8MUK1 530 aa6.52□□□□□ -1.37
SUSD1-210ENST00000532348 NRG2O14511 850 aaPredicted RBP6.52□□□□□ -1.37
SUSD1-210ENST00000532348 FAM160A2Q8N612 972 aaPredicted RBP6.52□□□□□ -1.37
SUSD1-210ENST00000532348 ZNF516Q92618 1163 aa6.52□□□□□ -1.37
SUSD1-210ENST00000532348 SLC52A1Q9NWF4 448 aa6.52□□□□□ -1.37
SUSD1-210ENST00000532348 SUGT1Q9Y2Z0 365 aa6.52□□□□□ -1.37
SUSD1-210ENST00000532348 NR6A1Q15406 480 aa6.51□□□□□ -1.37
SUSD1-210ENST00000532348 GPATCH3Q96I76 525 aa6.51□□□□□ -1.37
SUSD1-210ENST00000532348 DNAJC2Q99543 621 aaKnown RBP6.51□□□□□ -1.37
SUSD1-210ENST00000532348 MTRQ99707 1265 aa6.51□□□□□ -1.37
SUSD1-210ENST00000532348 USB1Q9BQ65 265 aaKnown RBP6.51□□□□□ -1.37
SUSD1-210ENST00000532348 PRR14Q9BWN1 585 aa6.51□□□□□ -1.37
SUSD1-210ENST00000532348 PLEKHD1A6NEE1 506 aa6.5□□□□□ -1.37
SUSD1-210ENST00000532348 PIK3CDO00329 1044 aa6.5□□□□□ -1.37
SUSD1-210ENST00000532348 SKIP12755 728 aa6.5□□□□□ -1.37
SUSD1-210ENST00000532348 Q3C1V9 767 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 115.6 ms