RNA–Protein interactions for RNA: ENST00000531733.1

FDFT1-220, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 2

Gene FDFT1, Length 712 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-220ENST00000531733 WNK3Q9BYP7 1800 aa30.17■■■□□ 2.42
FDFT1-220ENST00000531733 SOX12O15370 315 aa30.16■■■□□ 2.42
FDFT1-220ENST00000531733 ARHGEF25Q86VW2 580 aa30.15■■■□□ 2.42
FDFT1-220ENST00000531733 WDR17Q8IZU2 1322 aa30.15■■■□□ 2.42
FDFT1-220ENST00000531733 DDB1Q16531 1140 aa30.14■■■□□ 2.42
FDFT1-220ENST00000531733 NBPF14Q5TI25 921 aa30.13■■■□□ 2.41
FDFT1-220ENST00000531733 ZNF692Q9BU19 519 aaPredicted RBP30.12■■■□□ 2.41
FDFT1-220ENST00000531733 NFAT5O94916 1531 aa30.12■■■□□ 2.41
FDFT1-220ENST00000531733 MARCH10Q8NA82 808 aaPredicted RBP30.11■■■□□ 2.41
FDFT1-220ENST00000531733 TTC21AQ8NDW8 1320 aa30.08■■■□□ 2.41
FDFT1-220ENST00000531733 KCNH5Q8NCM2 988 aa30.08■■■□□ 2.41
FDFT1-220ENST00000531733 KTN1Q86UP2 1357 aaKnown RBP30.07■■■□□ 2.4
FDFT1-220ENST00000531733 RGPD3A6NKT7 1758 aaPredicted RBP30.07■■■□□ 2.4
FDFT1-220ENST00000531733 RGPD4Q7Z3J3 1758 aa30.07■■■□□ 2.4
FDFT1-220ENST00000531733 MON2Q7Z3U7 1717 aa30.06■■■□□ 2.4
FDFT1-220ENST00000531733 C11orf95C9JLR9 678 aaPredicted RBP30.06■■■□□ 2.4
FDFT1-220ENST00000531733 ANO8Q9HCE9 1232 aaPredicted RBP30.06■■■□□ 2.4
FDFT1-220ENST00000531733 PLSCR1O15162 318 aa30.05■■■□□ 2.4
FDFT1-220ENST00000531733 CARD10Q9BWT7 1032 aa30.05■■■□□ 2.4
FDFT1-220ENST00000531733 CSB-PGBD3P0DP91 1061 aa30.04■■■□□ 2.4
FDFT1-220ENST00000531733 BCL11BQ9C0K0 894 aaPredicted RBP30.04■■■□□ 2.4
FDFT1-220ENST00000531733 PROM2Q8N271 834 aa30.03■■■□□ 2.4
FDFT1-220ENST00000531733 CD163L1Q9NR16 1453 aa30.03■■■□□ 2.4
FDFT1-220ENST00000531733 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.01■■■□□ 2.39
FDFT1-220ENST00000531733 BCL9O00512 1426 aa30.01■■■□□ 2.39
FDFT1-220ENST00000531733 KCNQ2O43526 872 aa30■■■□□ 2.39
FDFT1-220ENST00000531733 CDCA7Q9BWT1 371 aaPredicted RBP30■■■□□ 2.39
FDFT1-220ENST00000531733 PDGFDQ9GZP0 370 aaPredicted RBP30■■■□□ 2.39
FDFT1-220ENST00000531733 NME9Q86XW9 330 aa29.99■■■□□ 2.39
FDFT1-220ENST00000531733 SPON1Q9HCB6 807 aa29.99■■■□□ 2.39
FDFT1-220ENST00000531733 SBNO2Q9Y2G9 1366 aa29.99■■■□□ 2.39
FDFT1-220ENST00000531733 CASZ1Q86V15 1759 aa29.98■■■□□ 2.39
FDFT1-220ENST00000531733 USP31Q70CQ4 1352 aa29.97■■■□□ 2.39
FDFT1-220ENST00000531733 USP54Q70EL1 1684 aa29.97■■■□□ 2.39
FDFT1-220ENST00000531733 ABCC6O95255 1503 aa29.96■■■□□ 2.39
FDFT1-220ENST00000531733 CARD11Q9BXL7 1154 aa29.95■■■□□ 2.39
FDFT1-220ENST00000531733 CCDC7Q96M83 1385 aa29.94■■■□□ 2.38
FDFT1-220ENST00000531733 EXOC5O00471 708 aa29.94■■■□□ 2.38
FDFT1-220ENST00000531733 SLC12A5Q9H2X9 1139 aa29.93■■■□□ 2.38
FDFT1-220ENST00000531733 PPP1R1BQ9UD71 204 aaPredicted RBP29.93■■■□□ 2.38
FDFT1-220ENST00000531733 TNS2Q63HR2 1409 aa29.93■■■□□ 2.38
FDFT1-220ENST00000531733 LTN1O94822 1766 aa29.92■■■□□ 2.38
FDFT1-220ENST00000531733 TMC1Q8TDI8 760 aa29.92■■■□□ 2.38
FDFT1-220ENST00000531733 ERBB3P21860 1342 aa29.91■■■□□ 2.38
FDFT1-220ENST00000531733 TXNRD1Q16881 649 aa29.9■■■□□ 2.38
FDFT1-220ENST00000531733 NLRP2Q9NX02 1062 aa29.88■■■□□ 2.37
FDFT1-220ENST00000531733 ZBTB7AO95365 584 aa29.87■■■□□ 2.37
FDFT1-220ENST00000531733 NHSQ6T4R5 1651 aa29.86■■■□□ 2.37
FDFT1-220ENST00000531733 ACSBG1Q96GR2 724 aa29.86■■■□□ 2.37
FDFT1-220ENST00000531733 A0A1W2PP64 1363 aa29.86■■■□□ 2.37
FDFT1-220ENST00000531733 NINLQ9Y2I6 1382 aa29.85■■■□□ 2.37
FDFT1-220ENST00000531733 HDGFL2Q7Z4V5 671 aaPredicted RBP29.84■■■□□ 2.37
FDFT1-220ENST00000531733 ANKRD24Q8TF21 1146 aa29.84■■■□□ 2.37
FDFT1-220ENST00000531733 EDC4Q6P2E9 1401 aaKnown RBP29.84■■■□□ 2.37
FDFT1-220ENST00000531733 MYOM1P52179 1685 aa29.82■■■□□ 2.36
FDFT1-220ENST00000531733 YY1P25490 414 aa29.82■■■□□ 2.36
FDFT1-220ENST00000531733 PTGER2P43116 358 aa29.82■■■□□ 2.36
FDFT1-220ENST00000531733 IL2RBP14784 551 aa29.81■■■□□ 2.36
FDFT1-220ENST00000531733 SLC15A2Q16348 729 aa29.81■■■□□ 2.36
FDFT1-220ENST00000531733 STK32BQ9NY57 414 aa29.81■■■□□ 2.36
FDFT1-220ENST00000531733 ATF5Q9Y2D1 282 aaPredicted RBP29.81■■■□□ 2.36
FDFT1-220ENST00000531733 TONSLQ96HA7 1378 aa29.79■■■□□ 2.36
FDFT1-220ENST00000531733 TERF2IPQ9NYB0 399 aa29.77■■■□□ 2.36
FDFT1-220ENST00000531733 BTAF1O14981 1849 aa29.77■■■□□ 2.36
FDFT1-220ENST00000531733 PAPPAQ13219 1627 aa29.76■■■□□ 2.35
FDFT1-220ENST00000531733 TESK2Q96S53 571 aa29.76■■■□□ 2.35
FDFT1-220ENST00000531733 FBLN1P23142 703 aa29.73■■■□□ 2.35
FDFT1-220ENST00000531733 IP6K1Q92551 441 aa29.73■■■□□ 2.35
FDFT1-220ENST00000531733 LTV1Q96GA3 475 aaPredicted RBP29.73■■■□□ 2.35
FDFT1-220ENST00000531733 PUS7Q96PZ0 661 aaKnown RBP29.73■■■□□ 2.35
FDFT1-220ENST00000531733 ST20-MTHFSA0A0A6YYL1 179 aa29.72■■■□□ 2.35
FDFT1-220ENST00000531733 SGIP1Q9BQI5 828 aa29.71■■■□□ 2.35
FDFT1-220ENST00000531733 ZNF827Q17R98 1081 aa29.7■■■□□ 2.35
FDFT1-220ENST00000531733 LRRC4BQ9NT99 713 aa29.7■■■□□ 2.35
FDFT1-220ENST00000531733 KAT6BQ8WYB5 2073 aa29.7■■■□□ 2.34
FDFT1-220ENST00000531733 UTRNP46939 3433 aa29.68■■■□□ 2.34
FDFT1-220ENST00000531733 FHDC1Q9C0D6 1143 aaPredicted RBP29.67■■■□□ 2.34
FDFT1-220ENST00000531733 MTFR1LQ9H019 292 aa29.67■■■□□ 2.34
FDFT1-220ENST00000531733 MAP3K19Q56UN5 1328 aa29.67■■■□□ 2.34
FDFT1-220ENST00000531733 DDX54Q8TDD1 881 aaKnown RBP29.66■■■□□ 2.34
FDFT1-220ENST00000531733 RGPD2P0DJD1 1756 aa29.66■■■□□ 2.34
FDFT1-220ENST00000531733 FAM208AQ9UK61 1670 aaKnown RBP29.66■■■□□ 2.34
FDFT1-220ENST00000531733 DCAF8L1A6NGE4 600 aa29.65■■■□□ 2.34
FDFT1-220ENST00000531733 HOXC9P31274 260 aa29.64■■■□□ 2.34
FDFT1-220ENST00000531733 SYT17Q9BSW7 474 aa29.64■■■□□ 2.34
FDFT1-220ENST00000531733 COG3Q96JB2 828 aa29.63■■■□□ 2.33
FDFT1-220ENST00000531733 SHANK3Q9BYB0 1731 aa29.62■■■□□ 2.33
FDFT1-220ENST00000531733 KCNQ4P56696 695 aa29.6■■■□□ 2.33
FDFT1-220ENST00000531733 AKT1S1Q96B36 256 aa29.59■■■□□ 2.33
FDFT1-220ENST00000531733 MEGF6O75095 1541 aa29.59■■■□□ 2.33
FDFT1-220ENST00000531733 DOT1LQ8TEK3 1739 aa29.59■■■□□ 2.33
FDFT1-220ENST00000531733 AMPHP49418 695 aa29.58■■■□□ 2.33
FDFT1-220ENST00000531733 ANKRD36BQ8N2N9 1353 aa29.58■■■□□ 2.33
FDFT1-220ENST00000531733 NSD2O96028 1365 aa29.57■■■□□ 2.32
FDFT1-220ENST00000531733 ARXQ96QS3 562 aa29.57■■■□□ 2.32
FDFT1-220ENST00000531733 PRIM1P49642 420 aaKnown RBP29.56■■■□□ 2.32
FDFT1-220ENST00000531733 RRS1Q15050 365 aaKnown RBP29.56■■■□□ 2.32
FDFT1-220ENST00000531733 GGNBP2Q9H3C7 697 aa29.55■■■□□ 2.32
FDFT1-220ENST00000531733 TUBGCP6Q96RT7 1819 aa29.55■■■□□ 2.32
FDFT1-220ENST00000531733 SYTL4Q96C24 671 aaPredicted RBP29.54■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms