RNA–Protein interactions for RNA: ENST00000531270.5

LRRK1-207, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,015 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-207ENST00000531270 NOL7Q9UMY1 257 aaKnown RBP17.29■□□□□ 0.36
LRRK1-207ENST00000531270 BMP2KQ9NSY1 1161 aaPredicted RBP17.29■□□□□ 0.36
LRRK1-207ENST00000531270 RABEP1Q15276 862 aa17.28■□□□□ 0.36
LRRK1-207ENST00000531270 DHX57Q6P158 1386 aaKnown RBP17.28■□□□□ 0.36
LRRK1-207ENST00000531270 GNAI2P04899 355 aa17.28■□□□□ 0.36
LRRK1-207ENST00000531270 TATP17735 454 aaPredicted RBP17.28■□□□□ 0.36
LRRK1-207ENST00000531270 HMGN5P82970 282 aaKnown RBP17.28■□□□□ 0.36
LRRK1-207ENST00000531270 GAS2L2Q8NHY3 880 aa17.28■□□□□ 0.36
LRRK1-207ENST00000531270 TDO2P48775 406 aa17.28■□□□□ 0.36
LRRK1-207ENST00000531270 CCDC57Q2TAC2 916 aa17.28■□□□□ 0.36
LRRK1-207ENST00000531270 RAI14Q9P0K7 980 aa17.28■□□□□ 0.36
LRRK1-207ENST00000531270 TOM1L2Q6ZVM7 507 aa17.28■□□□□ 0.36
LRRK1-207ENST00000531270 ABCC8Q09428 1581 aa17.27■□□□□ 0.36
LRRK1-207ENST00000531270 CCDC85AQ96PX6 553 aaPredicted RBP17.27■□□□□ 0.36
LRRK1-207ENST00000531270 FAM69CQ0P6D2 419 aa17.27■□□□□ 0.36
LRRK1-207ENST00000531270 CCDC192P0DO97 292 aa17.27■□□□□ 0.35
LRRK1-207ENST00000531270 TXLNBQ8N3L3 684 aa17.27■□□□□ 0.35
LRRK1-207ENST00000531270 MIA2Q96PC5 1412 aa17.26■□□□□ 0.35
LRRK1-207ENST00000531270 SPDYE4A6NLX3 237 aa17.26■□□□□ 0.35
LRRK1-207ENST00000531270 SLC4A2P04920 1241 aa17.26■□□□□ 0.35
LRRK1-207ENST00000531270 PRKAR2BP31323 418 aa17.26■□□□□ 0.35
LRRK1-207ENST00000531270 MTHFSP49914 203 aa17.26■□□□□ 0.35
LRRK1-207ENST00000531270 CCDC102AQ96A19 550 aa17.26■□□□□ 0.35
LRRK1-207ENST00000531270 ANAPC15P60006 121 aa17.26■□□□□ 0.35
LRRK1-207ENST00000531270 TWISTNBQ3B726 338 aaPredicted RBP17.26■□□□□ 0.35
LRRK1-207ENST00000531270 KIAA1328Q86T90 577 aa17.26■□□□□ 0.35
LRRK1-207ENST00000531270 PROSER2Q86WR7 435 aaPredicted RBP17.26■□□□□ 0.35
LRRK1-207ENST00000531270 CCDC113Q9H0I3 377 aa17.26■□□□□ 0.35
LRRK1-207ENST00000531270 EXOSC9Q06265 439 aaKnown RBP17.26■□□□□ 0.35
LRRK1-207ENST00000531270 UBAC1Q9BSL1 405 aa17.25■□□□□ 0.35
LRRK1-207ENST00000531270 PDZRN3Q9UPQ7 1066 aa17.25■□□□□ 0.35
LRRK1-207ENST00000531270 EIF5P55010 431 aaKnown RBP17.25■□□□□ 0.35
LRRK1-207ENST00000531270 TAF4BQ92750 862 aa17.25■□□□□ 0.35
LRRK1-207ENST00000531270 ERLIN1O75477 346 aa17.25■□□□□ 0.35
LRRK1-207ENST00000531270 PSMD1Q99460 953 aa17.25■□□□□ 0.35
LRRK1-207ENST00000531270 NOB1Q9ULX3 412 aaKnown RBP17.25■□□□□ 0.35
LRRK1-207ENST00000531270 HDGFL1Q5TGJ6 251 aa17.25■□□□□ 0.35
LRRK1-207ENST00000531270 JAKMIP3Q5VZ66 844 aa17.25■□□□□ 0.35
LRRK1-207ENST00000531270 PIP4K2BP78356 416 aa17.24■□□□□ 0.35
LRRK1-207ENST00000531270 LRRCC1Q9C099 1032 aa17.24■□□□□ 0.35
LRRK1-207ENST00000531270 GOLGA6L10A0A0M3HER8 536 aa17.24■□□□□ 0.35
LRRK1-207ENST00000531270 LARP1BQ659C4 914 aaKnown RBP17.24■□□□□ 0.35
LRRK1-207ENST00000531270 PAXIP1Q6ZW49 1069 aaPredicted RBP17.24■□□□□ 0.35
LRRK1-207ENST00000531270 MTERF4Q7Z6M4 381 aaKnown RBP17.24■□□□□ 0.35
LRRK1-207ENST00000531270 CBFA2T2O43439 604 aa17.23■□□□□ 0.35
LRRK1-207ENST00000531270 CEP57L1Q8IYX8 460 aa17.23■□□□□ 0.35
LRRK1-207ENST00000531270 SMG6Q86US8 1419 aaKnown RBP17.23■□□□□ 0.35
LRRK1-207ENST00000531270 EIF3JO75822 258 aaKnown RBP17.23■□□□□ 0.35
LRRK1-207ENST00000531270 MCM2P49736 904 aa17.23■□□□□ 0.35
LRRK1-207ENST00000531270 DHX8Q14562 1220 aaKnown RBP17.23■□□□□ 0.35
LRRK1-207ENST00000531270 AACSQ86V21 672 aa17.23■□□□□ 0.35
LRRK1-207ENST00000531270 TRIM21P19474 475 aaKnown RBP17.23■□□□□ 0.35
LRRK1-207ENST00000531270 MAPK8IP2Q13387 824 aaPredicted RBP17.22■□□□□ 0.35
LRRK1-207ENST00000531270 AEBP1Q8IUX7 1158 aa17.22■□□□□ 0.35
LRRK1-207ENST00000531270 FANCIQ9NVI1 1328 aa17.22■□□□□ 0.35
LRRK1-207ENST00000531270 ERICH4A6NGS2 130 aa17.22■□□□□ 0.35
LRRK1-207ENST00000531270 LRP2BPQ9P2M1 347 aa17.22■□□□□ 0.35
LRRK1-207ENST00000531270 TSR2Q969E8 191 aaKnown RBP17.22■□□□□ 0.35
LRRK1-207ENST00000531270 ADAMTS8Q9UP79 889 aa17.22■□□□□ 0.35
LRRK1-207ENST00000531270 ANKRD1Q15327 319 aa17.22■□□□□ 0.35
LRRK1-207ENST00000531270 TCP11L2Q8N4U5 519 aa17.22■□□□□ 0.35
LRRK1-207ENST00000531270 INCENPQ9NQS7 918 aa17.22■□□□□ 0.35
LRRK1-207ENST00000531270 ZSCAN25Q6NSZ9 544 aa17.21■□□□□ 0.35
LRRK1-207ENST00000531270 SPATA32Q96LK8 384 aa17.21■□□□□ 0.35
LRRK1-207ENST00000531270 POTEJP0CG39 1038 aa17.21■□□□□ 0.35
LRRK1-207ENST00000531270 CCDC91Q7Z6B0 441 aa17.21■□□□□ 0.35
LRRK1-207ENST00000531270 IQCEQ6IPM2 695 aa17.21■□□□□ 0.35
LRRK1-207ENST00000531270 TMEM87AQ8NBN3 555 aa17.21■□□□□ 0.35
LRRK1-207ENST00000531270 DYDC1Q8WWB3 177 aa17.21■□□□□ 0.35
LRRK1-207ENST00000531270 NF2P35240 595 aa17.2■□□□□ 0.34
LRRK1-207ENST00000531270 KRT85P78386 507 aa17.2■□□□□ 0.34
LRRK1-207ENST00000531270 UBA5Q9GZZ9 404 aa17.2■□□□□ 0.34
LRRK1-207ENST00000531270 FILIP1Q7Z7B0 1213 aa17.2■□□□□ 0.34
LRRK1-207ENST00000531270 WDR78Q5VTH9 848 aa17.2■□□□□ 0.34
LRRK1-207ENST00000531270 MAP2K1Q02750 393 aaPredicted RBP17.2■□□□□ 0.34
LRRK1-207ENST00000531270 EPB41L2O43491 1005 aaKnown RBP17.2■□□□□ 0.34
LRRK1-207ENST00000531270 LIG1P18858 919 aa17.2■□□□□ 0.34
LRRK1-207ENST00000531270 WDR70Q9NW82 654 aa17.2■□□□□ 0.34
LRRK1-207ENST00000531270 BRPF3Q9ULD4 1205 aa17.2■□□□□ 0.34
LRRK1-207ENST00000531270 DNA2P51530 1060 aa17.19■□□□□ 0.34
LRRK1-207ENST00000531270 CWC27Q6UX04 472 aaKnown RBP17.19■□□□□ 0.34
LRRK1-207ENST00000531270 PDRG1Q9NUG6 133 aa17.19■□□□□ 0.34
LRRK1-207ENST00000531270 IDH1O75874 414 aaKnown RBP17.19■□□□□ 0.34
LRRK1-207ENST00000531270 TTC16Q8NEE8 873 aa17.19■□□□□ 0.34
LRRK1-207ENST00000531270 CTNNBL1Q8WYA6 563 aaPredicted RBP17.19■□□□□ 0.34
LRRK1-207ENST00000531270 JAKMIP1Q96N16 626 aaKnown RBP17.19■□□□□ 0.34
LRRK1-207ENST00000531270 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.19■□□□□ 0.34
LRRK1-207ENST00000531270 ZNF530Q6P9A1 599 aaPredicted RBP17.18■□□□□ 0.34
LRRK1-207ENST00000531270 DDX11Q96FC9 970 aa17.18■□□□□ 0.34
LRRK1-207ENST00000531270 GOPCQ9HD26 462 aa17.18■□□□□ 0.34
LRRK1-207ENST00000531270 ABCF2Q9UG63 623 aa17.18■□□□□ 0.34
LRRK1-207ENST00000531270 CDKL5O76039 1030 aa17.18■□□□□ 0.34
LRRK1-207ENST00000531270 CDCA7LQ96GN5 454 aa17.18■□□□□ 0.34
LRRK1-207ENST00000531270 UPF3BQ9BZI7 483 aaKnown RBP17.18■□□□□ 0.34
LRRK1-207ENST00000531270 TMOD2Q9NZR1 351 aa17.18■□□□□ 0.34
LRRK1-207ENST00000531270 COMMD10Q9Y6G5 202 aa17.18■□□□□ 0.34
LRRK1-207ENST00000531270 BAZ1AQ9NRL2 1556 aaPredicted RBP17.18■□□□□ 0.34
LRRK1-207ENST00000531270 BCAR3O75815 825 aa17.17■□□□□ 0.34
LRRK1-207ENST00000531270 PTPRGP23470 1445 aa17.17■□□□□ 0.34
LRRK1-207ENST00000531270 MACROD2A1Z1Q3 448 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms