RNA–Protein interactions for RNA: ENST00000530388.1

ARHGEF12-209, Transcript of Rho guanine nucleotide exchange factor 12, humanhuman

TSL 1 (best)

Gene ARHGEF12, Length 4,309 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF12-209ENST00000530388 GIGYF1O75420 1035 aaPredicted RBP4.99□□□□□ -1.61
ARHGEF12-209ENST00000530388 ZNF280DQ6N043 979 aa4.99□□□□□ -1.61
ARHGEF12-209ENST00000530388 RSBN1LQ6PCB5 846 aaPredicted RBP4.99□□□□□ -1.61
ARHGEF12-209ENST00000530388 NT5DC4Q86YG4 428 aa4.99□□□□□ -1.61
ARHGEF12-209ENST00000530388 GLYCTKQ8IVS8 523 aa4.99□□□□□ -1.61
ARHGEF12-209ENST00000530388 PDCD7Q8N8D1 485 aaKnown RBP4.99□□□□□ -1.61
ARHGEF12-209ENST00000530388 FBXO9Q9UK97 447 aaPredicted RBP4.99□□□□□ -1.61
ARHGEF12-209ENST00000530388 LILRB3O75022 631 aa4.99□□□□□ -1.61
ARHGEF12-209ENST00000530388 RHBDL3P58872 404 aa4.99□□□□□ -1.61
ARHGEF12-209ENST00000530388 CRTC2Q53ET0 693 aaPredicted RBP4.99□□□□□ -1.61
ARHGEF12-209ENST00000530388 PADI6Q6TGC4 694 aa4.99□□□□□ -1.61
ARHGEF12-209ENST00000530388 AKT1S1Q96B36 256 aa4.99□□□□□ -1.61
ARHGEF12-209ENST00000530388 EVI5O60447 810 aa4.99□□□□□ -1.61
ARHGEF12-209ENST00000530388 PPFIA4O75335 1185 aa4.99□□□□□ -1.61
ARHGEF12-209ENST00000530388 LGR5O75473 907 aa4.99□□□□□ -1.61
ARHGEF12-209ENST00000530388 CCDC189A1A4V9 331 aa4.99□□□□□ -1.61
ARHGEF12-209ENST00000530388 USP5P45974 858 aa4.99□□□□□ -1.61
ARHGEF12-209ENST00000530388 HDAC1Q13547 482 aaPredicted RBP4.99□□□□□ -1.61
ARHGEF12-209ENST00000530388 CREBRFQ8IUR6 639 aa4.99□□□□□ -1.61
ARHGEF12-209ENST00000530388 AMOTL1Q8IY63 956 aa4.99□□□□□ -1.61
ARHGEF12-209ENST00000530388 FRMD4BQ9Y2L6 1034 aa4.99□□□□□ -1.61
ARHGEF12-209ENST00000530388 VAMP1P23763 118 aa4.98□□□□□ -1.61
ARHGEF12-209ENST00000530388 DEPDC4Q8N2C3 294 aa4.98□□□□□ -1.61
ARHGEF12-209ENST00000530388 PCGF6Q9BYE7 350 aa4.98□□□□□ -1.61
ARHGEF12-209ENST00000530388 BACH2Q9BYV9 841 aa4.98□□□□□ -1.61
ARHGEF12-209ENST00000530388 ADGRG1Q9Y653 693 aa4.98□□□□□ -1.61
ARHGEF12-209ENST00000530388 CLGNO14967 610 aa4.98□□□□□ -1.61
ARHGEF12-209ENST00000530388 ZNF500O60304 480 aaPredicted RBP4.98□□□□□ -1.61
ARHGEF12-209ENST00000530388 EN1Q05925 392 aaPredicted RBP4.98□□□□□ -1.61
ARHGEF12-209ENST00000530388 NME8Q8N427 588 aa4.98□□□□□ -1.61
ARHGEF12-209ENST00000530388 TMC2Q8TDI7 906 aa4.98□□□□□ -1.61
ARHGEF12-209ENST00000530388 TSC1Q92574 1164 aa4.98□□□□□ -1.61
ARHGEF12-209ENST00000530388 SPC25Q9HBM1 224 aa4.98□□□□□ -1.61
ARHGEF12-209ENST00000530388 PPP1R3GB7ZBB8 358 aa4.97□□□□□ -1.61
ARHGEF12-209ENST00000530388 EGFLAMQ63HQ2 1017 aa4.97□□□□□ -1.61
ARHGEF12-209ENST00000530388 CAPN12Q6ZSI9 719 aa4.97□□□□□ -1.61
ARHGEF12-209ENST00000530388 PNMA1Q8ND90 353 aa4.97□□□□□ -1.61
ARHGEF12-209ENST00000530388 GAS2L2Q8NHY3 880 aa4.97□□□□□ -1.61
ARHGEF12-209ENST00000530388 TMC1Q8TDI8 760 aa4.97□□□□□ -1.61
ARHGEF12-209ENST00000530388 SECISBP2LQ93073 1101 aaKnown RBP4.97□□□□□ -1.61
ARHGEF12-209ENST00000530388 ANO2Q9NQ90 1003 aa4.97□□□□□ -1.61
ARHGEF12-209ENST00000530388 BSDC1Q9NW68 430 aaPredicted RBP4.97□□□□□ -1.61
ARHGEF12-209ENST00000530388 PRR12Q9ULL5 1215 aa4.97□□□□□ -1.61
ARHGEF12-209ENST00000530388 SSFA2P28290 1259 aa4.97□□□□□ -1.61
ARHGEF12-209ENST00000530388 CACNB1Q02641 598 aaPredicted RBP4.97□□□□□ -1.61
ARHGEF12-209ENST00000530388 PPP2R5AQ15172 486 aa4.97□□□□□ -1.61
ARHGEF12-209ENST00000530388 FBXO33Q7Z6M2 555 aa4.97□□□□□ -1.61
ARHGEF12-209ENST00000530388 FAM198AQ9UFP1 575 aa4.97□□□□□ -1.61
ARHGEF12-209ENST00000530388 SWAP70Q9UH65 585 aa4.97□□□□□ -1.61
ARHGEF12-209ENST00000530388 PCDHGC3Q9UN70 934 aa4.97□□□□□ -1.61
ARHGEF12-209ENST00000530388 NOVA2Q9UNW9 492 aaKnown RBP4.97□□□□□ -1.61
ARHGEF12-209ENST00000530388 CHMP3Q9Y3E7 222 aa4.97□□□□□ -1.61
ARHGEF12-209ENST00000530388 MAP3K7O43318 606 aa4.97□□□□□ -1.61
ARHGEF12-209ENST00000530388 ECM1Q16610 540 aa4.97□□□□□ -1.61
ARHGEF12-209ENST00000530388 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.97□□□□□ -1.61
ARHGEF12-209ENST00000530388 JADE2Q9NQC1 790 aa4.97□□□□□ -1.61
ARHGEF12-209ENST00000530388 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.97□□□□□ -1.61
ARHGEF12-209ENST00000530388 IFT57Q9NWB7 429 aa4.97□□□□□ -1.61
ARHGEF12-209ENST00000530388 PCDHGA10Q9Y5H3 936 aa4.97□□□□□ -1.61
ARHGEF12-209ENST00000530388 PSME1Q06323 249 aa4.96□□□□□ -1.61
ARHGEF12-209ENST00000530388 FTSJ3Q8IY81 847 aaKnown RBP4.96□□□□□ -1.61
ARHGEF12-209ENST00000530388 FAM161BQ96MY7 647 aa4.96□□□□□ -1.61
ARHGEF12-209ENST00000530388 VTI1BQ9UEU0 232 aa4.96□□□□□ -1.61
ARHGEF12-209ENST00000530388 H3BRB1 525 aa4.96□□□□□ -1.62
ARHGEF12-209ENST00000530388 APLP1P51693 650 aa4.96□□□□□ -1.62
ARHGEF12-209ENST00000530388 HDLBPQ00341 1268 aaKnown RBP4.96□□□□□ -1.62
ARHGEF12-209ENST00000530388 ARID5AQ03989 594 aa4.96□□□□□ -1.62
ARHGEF12-209ENST00000530388 MTMR3Q13615 1198 aa4.96□□□□□ -1.62
ARHGEF12-209ENST00000530388 NFE2L2Q16236 605 aa4.96□□□□□ -1.62
ARHGEF12-209ENST00000530388 OSBPL2Q9H1P3 480 aa4.96□□□□□ -1.62
ARHGEF12-209ENST00000530388 TUT1Q9H6E5 874 aaKnown RBP4.96□□□□□ -1.62
ARHGEF12-209ENST00000530388 ANO8Q9HCE9 1232 aaPredicted RBP4.96□□□□□ -1.62
ARHGEF12-209ENST00000530388 GNL3LQ9NVN8 582 aaKnown RBP4.96□□□□□ -1.62
ARHGEF12-209ENST00000530388 SFMBT1Q9UHJ3 866 aa4.96□□□□□ -1.62
ARHGEF12-209ENST00000530388 INPP5FQ9Y2H2 1132 aa4.96□□□□□ -1.62
ARHGEF12-209ENST00000530388 CHMP4BP1P59074 171 aa4.96□□□□□ -1.62
ARHGEF12-209ENST00000530388 TCEAL1Q15170 157 aa4.96□□□□□ -1.62
ARHGEF12-209ENST00000530388 ODR4Q5SWX8 454 aa4.96□□□□□ -1.62
ARHGEF12-209ENST00000530388 AXDND1Q5T1B0 1012 aaPredicted RBP4.96□□□□□ -1.62
ARHGEF12-209ENST00000530388 RNF34Q969K3 372 aa4.96□□□□□ -1.62
ARHGEF12-209ENST00000530388 DMGDHQ9UI17 866 aaKnown RBP4.96□□□□□ -1.62
ARHGEF12-209ENST00000530388 MYBPC2Q14324 1141 aa4.96□□□□□ -1.62
ARHGEF12-209ENST00000530388 PLEKHG6Q3KR16 790 aa4.96□□□□□ -1.62
ARHGEF12-209ENST00000530388 C11orf96Q7Z7L8 435 aa4.96□□□□□ -1.62
ARHGEF12-209ENST00000530388 IPO4Q8TEX9 1081 aaKnown RBP4.96□□□□□ -1.62
ARHGEF12-209ENST00000530388 RBM19Q9Y4C8 960 aaKnown RBP4.96□□□□□ -1.62
ARHGEF12-209ENST00000530388 KRT18P05783 430 aaKnown RBP4.95□□□□□ -1.62
ARHGEF12-209ENST00000530388 COPB2P35606 906 aa4.95□□□□□ -1.62
ARHGEF12-209ENST00000530388 RAD51AP2Q09MP3 1159 aa4.95□□□□□ -1.62
ARHGEF12-209ENST00000530388 PDE3BQ13370 1112 aa4.95□□□□□ -1.62
ARHGEF12-209ENST00000530388 LARP1Q6PKG0 1096 aaKnown RBP4.95□□□□□ -1.62
ARHGEF12-209ENST00000530388 NUTM1Q86Y26 1132 aa4.95□□□□□ -1.62
ARHGEF12-209ENST00000530388 PCDH12Q9NPG4 1184 aa4.95□□□□□ -1.62
ARHGEF12-209ENST00000530388 NLRP2Q9NX02 1062 aa4.95□□□□□ -1.62
ARHGEF12-209ENST00000530388 SPTLC1O15269 473 aa4.95□□□□□ -1.62
ARHGEF12-209ENST00000530388 ATP2B4P23634 1241 aa4.95□□□□□ -1.62
ARHGEF12-209ENST00000530388 FERMT3Q86UX7 667 aa4.95□□□□□ -1.62
ARHGEF12-209ENST00000530388 ZNF622Q969S3 477 aaKnown RBP eCLIP4.95□□□□□ -1.62
ARHGEF12-209ENST00000530388 MS4A3Q96HJ5 214 aa4.95□□□□□ -1.62
ARHGEF12-209ENST00000530388 HSD3B2P26439 372 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms