RNA–Protein interactions for RNA: ENST00000529332.5

TM9SF1-208, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 5

Gene TM9SF1, Length 2,107 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-208ENST00000529332 TNNQ9UQP3 1299 aa20.25■□□□□ 0.83
TM9SF1-208ENST00000529332 MAP2P11137 1827 aaKnown RBP20.25■□□□□ 0.83
TM9SF1-208ENST00000529332 RLBP1P12271 317 aa20.24■□□□□ 0.83
TM9SF1-208ENST00000529332 XIRP1Q702N8 1843 aaKnown RBP20.23■□□□□ 0.83
TM9SF1-208ENST00000529332 ATF3P18847 181 aa20.23■□□□□ 0.83
TM9SF1-208ENST00000529332 AATKQ6ZMQ8 1374 aa20.23■□□□□ 0.83
TM9SF1-208ENST00000529332 OVOS2A0A0J9YW53 1432 aa20.23■□□□□ 0.83
TM9SF1-208ENST00000529332 OVOS2Q6IE36 1432 aa20.23■□□□□ 0.83
TM9SF1-208ENST00000529332 U2AF1L5P0DN76 240 aaPredicted RBP20.23■□□□□ 0.83
TM9SF1-208ENST00000529332 U2AF1Q01081 240 aaKnown RBP eCLIP20.23■□□□□ 0.83
TM9SF1-208ENST00000529332 ESCO1Q5FWF5 840 aa20.23■□□□□ 0.83
TM9SF1-208ENST00000529332 VIRMAQ69YN4 1812 aaKnown RBP20.22■□□□□ 0.83
TM9SF1-208ENST00000529332 BCL2L13Q9BXK5 485 aa20.22■□□□□ 0.83
TM9SF1-208ENST00000529332 PIK3C2AO00443 1686 aa20.22■□□□□ 0.83
TM9SF1-208ENST00000529332 MSH6P52701 1360 aa20.22■□□□□ 0.83
TM9SF1-208ENST00000529332 USP54Q70EL1 1684 aa20.21■□□□□ 0.83
TM9SF1-208ENST00000529332 C1orf167Q5SNV9 1468 aa20.21■□□□□ 0.83
TM9SF1-208ENST00000529332 NCBP3Q53F19 620 aaKnown RBP20.2■□□□□ 0.82
TM9SF1-208ENST00000529332 LRRC7Q96NW7 1537 aa20.2■□□□□ 0.82
TM9SF1-208ENST00000529332 ZRANB1Q9UGI0 708 aa20.2■□□□□ 0.82
TM9SF1-208ENST00000529332 PCDHB15Q9Y5E8 787 aa20.2■□□□□ 0.82
TM9SF1-208ENST00000529332 COL3A1P02461 1466 aaPredicted RBP20.19■□□□□ 0.82
TM9SF1-208ENST00000529332 USP19O94966 1318 aa20.19■□□□□ 0.82
TM9SF1-208ENST00000529332 CADPS2Q86UW7 1296 aa20.19■□□□□ 0.82
TM9SF1-208ENST00000529332 DAXXQ9UER7 740 aaPredicted RBP20.19■□□□□ 0.82
TM9SF1-208ENST00000529332 USP31Q70CQ4 1352 aa20.18■□□□□ 0.82
TM9SF1-208ENST00000529332 MAPK8IP3Q9UPT6 1336 aa20.18■□□□□ 0.82
TM9SF1-208ENST00000529332 CDK12Q9NYV4 1490 aaPredicted RBP20.18■□□□□ 0.82
TM9SF1-208ENST00000529332 MST1RQ04912 1400 aa20.18■□□□□ 0.82
TM9SF1-208ENST00000529332 ZNF335Q9H4Z2 1342 aaPredicted RBP20.18■□□□□ 0.82
TM9SF1-208ENST00000529332 MYH16Q9H6N6 1097 aa20.18■□□□□ 0.82
TM9SF1-208ENST00000529332 NFKBIBQ15653 356 aa20.17■□□□□ 0.82
TM9SF1-208ENST00000529332 PNPLA6Q8IY17 1366 aa20.17■□□□□ 0.82
TM9SF1-208ENST00000529332 AAMPQ13685 434 aa20.17■□□□□ 0.82
TM9SF1-208ENST00000529332 POLKQ9UBT6 870 aa20.17■□□□□ 0.82
TM9SF1-208ENST00000529332 PSME1Q06323 249 aa20.16■□□□□ 0.82
TM9SF1-208ENST00000529332 PLEKHF1Q96S99 279 aa20.16■□□□□ 0.82
TM9SF1-208ENST00000529332 SEC24BO95487 1268 aa20.15■□□□□ 0.82
TM9SF1-208ENST00000529332 ORAI2Q96SN7 254 aa20.15■□□□□ 0.82
TM9SF1-208ENST00000529332 MARF1Q9Y4F3 1742 aaKnown RBP20.14■□□□□ 0.81
TM9SF1-208ENST00000529332 DIAPH1O60610 1272 aaKnown RBP20.13■□□□□ 0.81
TM9SF1-208ENST00000529332 TSR2Q969E8 191 aaKnown RBP20.13■□□□□ 0.81
TM9SF1-208ENST00000529332 U2SURPO15042 1029 aaKnown RBP20.12■□□□□ 0.81
TM9SF1-208ENST00000529332 NLRP6P59044 892 aa20.12■□□□□ 0.81
TM9SF1-208ENST00000529332 ABTB2Q8N961 1025 aa20.12■□□□□ 0.81
TM9SF1-208ENST00000529332 TRPM3Q9HCF6 1732 aaPredicted RBP20.12■□□□□ 0.81
TM9SF1-208ENST00000529332 TMPOP42166 694 aaKnown RBP20.11■□□□□ 0.81
TM9SF1-208ENST00000529332 TRIM35Q9UPQ4 493 aa20.11■□□□□ 0.81
TM9SF1-208ENST00000529332 EMILIN1Q9Y6C2 1016 aa20.11■□□□□ 0.81
TM9SF1-208ENST00000529332 PDZRN3Q9UPQ7 1066 aa20.11■□□□□ 0.81
TM9SF1-208ENST00000529332 MVPQ14764 893 aaKnown RBP20.1■□□□□ 0.81
TM9SF1-208ENST00000529332 FOXO3O43524 673 aa20.09■□□□□ 0.81
TM9SF1-208ENST00000529332 FBLN1P23142 703 aa20.09■□□□□ 0.81
TM9SF1-208ENST00000529332 RRS1Q15050 365 aaKnown RBP20.09■□□□□ 0.81
TM9SF1-208ENST00000529332 EXOSC9Q06265 439 aaKnown RBP20.09■□□□□ 0.81
TM9SF1-208ENST00000529332 ZKSCAN2Q63HK3 967 aa20.09■□□□□ 0.81
TM9SF1-208ENST00000529332 CT47B1P0C2W7 299 aaPredicted RBP20.08■□□□□ 0.81
TM9SF1-208ENST00000529332 RWDD1Q9H446 243 aaPredicted RBP20.08■□□□□ 0.8
TM9SF1-208ENST00000529332 DZIP1LQ8IYY4 767 aaKnown RBP20.07■□□□□ 0.8
TM9SF1-208ENST00000529332 PNNQ9H307 717 aaKnown RBP20.07■□□□□ 0.8
TM9SF1-208ENST00000529332 KRT28Q7Z3Y7 464 aa20.06■□□□□ 0.8
TM9SF1-208ENST00000529332 PEAK1Q9H792 1746 aa20.06■□□□□ 0.8
TM9SF1-208ENST00000529332 FTSJ3Q8IY81 847 aaKnown RBP20.05■□□□□ 0.8
TM9SF1-208ENST00000529332 SMC4Q9NTJ3 1288 aa20.05■□□□□ 0.8
TM9SF1-208ENST00000529332 NPHP3Q7Z494 1330 aa20.05■□□□□ 0.8
TM9SF1-208ENST00000529332 NUTM2GQ5VZR2 741 aa20.05■□□□□ 0.8
TM9SF1-208ENST00000529332 SSH1Q8WYL5 1049 aa20.05■□□□□ 0.8
TM9SF1-208ENST00000529332 SBNO1A3KN83 1393 aa20.05■□□□□ 0.8
TM9SF1-208ENST00000529332 KIF24Q5T7B8 1368 aa20.05■□□□□ 0.8
TM9SF1-208ENST00000529332 ALS2Q96Q42 1657 aa20.05■□□□□ 0.8
TM9SF1-208ENST00000529332 SOX12O15370 315 aa20.04■□□□□ 0.8
TM9SF1-208ENST00000529332 FLT4P35916 1363 aa20.03■□□□□ 0.8
TM9SF1-208ENST00000529332 TRIM27P14373 513 aa20.03■□□□□ 0.8
TM9SF1-208ENST00000529332 GSE1Q14687 1217 aa20.03■□□□□ 0.8
TM9SF1-208ENST00000529332 IL16Q14005 1332 aa20.03■□□□□ 0.8
TM9SF1-208ENST00000529332 FRAT2O75474 233 aaPredicted RBP20.03■□□□□ 0.8
TM9SF1-208ENST00000529332 LTN1O94822 1766 aa20.03■□□□□ 0.8
TM9SF1-208ENST00000529332 MAP3K19Q56UN5 1328 aa20.02■□□□□ 0.8
TM9SF1-208ENST00000529332 RIPK4P57078 832 aa20.02■□□□□ 0.8
TM9SF1-208ENST00000529332 XPCQ01831 940 aaPredicted RBP20.02■□□□□ 0.8
TM9SF1-208ENST00000529332 IL13P35225 146 aa20.02■□□□□ 0.79
TM9SF1-208ENST00000529332 KCNH5Q8NCM2 988 aa20.02■□□□□ 0.79
TM9SF1-208ENST00000529332 SLIT3O75094 1523 aa20.01■□□□□ 0.79
TM9SF1-208ENST00000529332 NFAT5O94916 1531 aa20.01■□□□□ 0.79
TM9SF1-208ENST00000529332 FCHSD2O94868 740 aa20■□□□□ 0.79
TM9SF1-208ENST00000529332 AMPHP49418 695 aa20■□□□□ 0.79
TM9SF1-208ENST00000529332 SLAIN2Q9P270 581 aa20■□□□□ 0.79
TM9SF1-208ENST00000529332 ATF7IPQ6VMQ6 1270 aa20■□□□□ 0.79
TM9SF1-208ENST00000529332 RTL1A6NKG5 1358 aa20■□□□□ 0.79
TM9SF1-208ENST00000529332 NOB1Q9ULX3 412 aaKnown RBP19.99■□□□□ 0.79
TM9SF1-208ENST00000529332 PHRF1Q9P1Y6 1649 aaKnown RBP19.99■□□□□ 0.79
TM9SF1-208ENST00000529332 LMOD2Q6P5Q4 547 aa19.99■□□□□ 0.79
TM9SF1-208ENST00000529332 TBC1D32Q96NH3 1257 aa19.99■□□□□ 0.79
TM9SF1-208ENST00000529332 PXDNQ92626 1479 aa19.98■□□□□ 0.79
TM9SF1-208ENST00000529332 BRINP3Q76B58 766 aa19.98■□□□□ 0.79
TM9SF1-208ENST00000529332 IL27Q8NEV9 243 aa19.98■□□□□ 0.79
TM9SF1-208ENST00000529332 RGPD1P0DJD0 1748 aa19.97■□□□□ 0.79
TM9SF1-208ENST00000529332 ITPRIPQ8IWB1 547 aa19.97■□□□□ 0.79
TM9SF1-208ENST00000529332 TNS3Q68CZ2 1445 aa19.97■□□□□ 0.79
TM9SF1-208ENST00000529332 LTBP4Q8N2S1 1624 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms