RNA–Protein interactions for RNA: ENST00000527962.5

CTTN-212, Transcript of cortactin, humanhuman

TSL 2

Gene CTTN, Length 587 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-212ENST00000527962 PARP4Q9UKK3 1724 aaKnown RBP22.48■■□□□ 1.19
CTTN-212ENST00000527962 KCNQ2O43526 872 aa22.47■■□□□ 1.19
CTTN-212ENST00000527962 CARD10Q9BWT7 1032 aa22.47■■□□□ 1.19
CTTN-212ENST00000527962 AXIN2Q9Y2T1 843 aa22.47■■□□□ 1.19
CTTN-212ENST00000527962 CPSF1Q10570 1443 aaKnown RBP22.47■■□□□ 1.19
CTTN-212ENST00000527962 SOX12O15370 315 aa22.46■■□□□ 1.19
CTTN-212ENST00000527962 EXOC5O00471 708 aa22.45■■□□□ 1.18
CTTN-212ENST00000527962 SIN3AQ96ST3 1273 aa22.45■■□□□ 1.18
CTTN-212ENST00000527962 RREB1Q92766 1687 aa22.45■■□□□ 1.18
CTTN-212ENST00000527962 KTN1Q86UP2 1357 aaKnown RBP22.44■■□□□ 1.18
CTTN-212ENST00000527962 TRPM1Q7Z4N2 1603 aa22.42■■□□□ 1.18
CTTN-212ENST00000527962 MARCH10Q8NA82 808 aaPredicted RBP22.42■■□□□ 1.18
CTTN-212ENST00000527962 BCL9O00512 1426 aa22.41■■□□□ 1.18
CTTN-212ENST00000527962 CCDC7Q96M83 1385 aa22.41■■□□□ 1.18
CTTN-212ENST00000527962 NUP188Q5SRE5 1749 aa22.41■■□□□ 1.18
CTTN-212ENST00000527962 PIK3C2AO00443 1686 aa22.39■■□□□ 1.18
CTTN-212ENST00000527962 NINLQ9Y2I6 1382 aa22.39■■□□□ 1.18
CTTN-212ENST00000527962 YY1P25490 414 aa22.38■■□□□ 1.17
CTTN-212ENST00000527962 LRRC37A3O60309 1634 aa22.38■■□□□ 1.17
CTTN-212ENST00000527962 HDGFL2Q7Z4V5 671 aaPredicted RBP22.37■■□□□ 1.17
CTTN-212ENST00000527962 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.37■■□□□ 1.17
CTTN-212ENST00000527962 STK32BQ9NY57 414 aa22.37■■□□□ 1.17
CTTN-212ENST00000527962 TMC1Q8TDI8 760 aa22.36■■□□□ 1.17
CTTN-212ENST00000527962 CARD11Q9BXL7 1154 aa22.36■■□□□ 1.17
CTTN-212ENST00000527962 PEAK1Q9H792 1746 aa22.36■■□□□ 1.17
CTTN-212ENST00000527962 SBNO2Q9Y2G9 1366 aa22.35■■□□□ 1.17
CTTN-212ENST00000527962 RGPD3A6NKT7 1758 aaPredicted RBP22.35■■□□□ 1.17
CTTN-212ENST00000527962 COL18A1P39060 1754 aa22.35■■□□□ 1.17
CTTN-212ENST00000527962 RGPD4Q7Z3J3 1758 aa22.35■■□□□ 1.17
CTTN-212ENST00000527962 TXNRD1Q16881 649 aa22.34■■□□□ 1.17
CTTN-212ENST00000527962 PTF1AQ7RTS3 328 aa22.34■■□□□ 1.17
CTTN-212ENST00000527962 NLRP2Q9NX02 1062 aa22.34■■□□□ 1.17
CTTN-212ENST00000527962 ABCC6O95255 1503 aa22.33■■□□□ 1.17
CTTN-212ENST00000527962 PROM2Q8N271 834 aa22.33■■□□□ 1.17
CTTN-212ENST00000527962 ANO8Q9HCE9 1232 aaPredicted RBP22.33■■□□□ 1.17
CTTN-212ENST00000527962 TERF2IPQ9NYB0 399 aa22.33■■□□□ 1.17
CTTN-212ENST00000527962 USP31Q70CQ4 1352 aa22.33■■□□□ 1.17
CTTN-212ENST00000527962 ERBB3P21860 1342 aa22.31■■□□□ 1.16
CTTN-212ENST00000527962 IL2RBP14784 551 aa22.3■■□□□ 1.16
CTTN-212ENST00000527962 SLC15A2Q16348 729 aa22.3■■□□□ 1.16
CTTN-212ENST00000527962 NFAT5O94916 1531 aa22.3■■□□□ 1.16
CTTN-212ENST00000527962 ZBTB7AO95365 584 aa22.29■■□□□ 1.16
CTTN-212ENST00000527962 NME9Q86XW9 330 aa22.29■■□□□ 1.16
CTTN-212ENST00000527962 AKAP12Q02952 1782 aa22.29■■□□□ 1.16
CTTN-212ENST00000527962 TNS2Q63HR2 1409 aa22.29■■□□□ 1.16
CTTN-212ENST00000527962 PUS7Q96PZ0 661 aaKnown RBP22.28■■□□□ 1.16
CTTN-212ENST00000527962 SLC24A1O60721 1099 aa22.27■■□□□ 1.16
CTTN-212ENST00000527962 ANKRD24Q8TF21 1146 aa22.27■■□□□ 1.16
CTTN-212ENST00000527962 SBF2Q86WG5 1849 aa22.27■■□□□ 1.15
CTTN-212ENST00000527962 SLC12A5Q9H2X9 1139 aa22.26■■□□□ 1.15
CTTN-212ENST00000527962 EDC4Q6P2E9 1401 aaKnown RBP22.25■■□□□ 1.15
CTTN-212ENST00000527962 ACSBG1Q96GR2 724 aa22.25■■□□□ 1.15
CTTN-212ENST00000527962 MTFR1LQ9H019 292 aa22.25■■□□□ 1.15
CTTN-212ENST00000527962 ATF5Q9Y2D1 282 aaPredicted RBP22.25■■□□□ 1.15
CTTN-212ENST00000527962 TONSLQ96HA7 1378 aa22.25■■□□□ 1.15
CTTN-212ENST00000527962 WNK3Q9BYP7 1800 aa22.24■■□□□ 1.15
CTTN-212ENST00000527962 PDGFDQ9GZP0 370 aaPredicted RBP22.23■■□□□ 1.15
CTTN-212ENST00000527962 PTGER2P43116 358 aa22.22■■□□□ 1.15
CTTN-212ENST00000527962 MON2Q7Z3U7 1717 aa22.2■■□□□ 1.14
CTTN-212ENST00000527962 RGPD5Q99666 1765 aa22.2■■□□□ 1.14
CTTN-212ENST00000527962 IP6K1Q92551 441 aa22.2■■□□□ 1.14
CTTN-212ENST00000527962 CD163L1Q9NR16 1453 aa22.2■■□□□ 1.14
CTTN-212ENST00000527962 CASZ1Q86V15 1759 aa22.18■■□□□ 1.14
CTTN-212ENST00000527962 A0A1W2PP64 1363 aa22.18■■□□□ 1.14
CTTN-212ENST00000527962 COG3Q96JB2 828 aa22.18■■□□□ 1.14
CTTN-212ENST00000527962 DDX54Q8TDD1 881 aaKnown RBP22.17■■□□□ 1.14
CTTN-212ENST00000527962 SYT17Q9BSW7 474 aa22.17■■□□□ 1.14
CTTN-212ENST00000527962 FHDC1Q9C0D6 1143 aaPredicted RBP22.17■■□□□ 1.14
CTTN-212ENST00000527962 SLC27A3Q5K4L6 730 aa22.16■■□□□ 1.14
CTTN-212ENST00000527962 LTV1Q96GA3 475 aaPredicted RBP22.16■■□□□ 1.14
CTTN-212ENST00000527962 ARXQ96QS3 562 aa22.15■■□□□ 1.14
CTTN-212ENST00000527962 NHSQ6T4R5 1651 aa22.14■■□□□ 1.14
CTTN-212ENST00000527962 USP54Q70EL1 1684 aa22.14■■□□□ 1.14
CTTN-212ENST00000527962 AMPHP49418 695 aa22.14■■□□□ 1.13
CTTN-212ENST00000527962 SLC16A10Q8TF71 515 aa22.12■■□□□ 1.13
CTTN-212ENST00000527962 SYTL4Q96C24 671 aaPredicted RBP22.12■■□□□ 1.13
CTTN-212ENST00000527962 ST20-MTHFSA0A0A6YYL1 179 aa22.11■■□□□ 1.13
CTTN-212ENST00000527962 SGIP1Q9BQI5 828 aa22.11■■□□□ 1.13
CTTN-212ENST00000527962 POLD1P28340 1107 aa22.1■■□□□ 1.13
CTTN-212ENST00000527962 LTN1O94822 1766 aa22.1■■□□□ 1.13
CTTN-212ENST00000527962 HOXC9P31274 260 aa22.09■■□□□ 1.13
CTTN-212ENST00000527962 LRRC4BQ9NT99 713 aa22.09■■□□□ 1.13
CTTN-212ENST00000527962 MAP3K19Q56UN5 1328 aa22.08■■□□□ 1.13
CTTN-212ENST00000527962 MYOM1P52179 1685 aa22.08■■□□□ 1.13
CTTN-212ENST00000527962 HMGB2P26583 209 aaKnown RBP22.08■■□□□ 1.13
CTTN-212ENST00000527962 ZNF827Q17R98 1081 aa22.08■■□□□ 1.13
CTTN-212ENST00000527962 ZCRB1Q8TBF4 217 aaKnown RBP22.08■■□□□ 1.13
CTTN-212ENST00000527962 TESK2Q96S53 571 aa22.08■■□□□ 1.13
CTTN-212ENST00000527962 TFCP2L1Q9NZI6 479 aa22.08■■□□□ 1.13
CTTN-212ENST00000527962 PRIM1P49642 420 aaKnown RBP22.07■■□□□ 1.12
CTTN-212ENST00000527962 AKT1S1Q96B36 256 aa22.06■■□□□ 1.12
CTTN-212ENST00000527962 MAP3K5Q99683 1374 aa22.06■■□□□ 1.12
CTTN-212ENST00000527962 ANKRD36BQ8N2N9 1353 aa22.05■■□□□ 1.12
CTTN-212ENST00000527962 TMF1P82094 1093 aa22.05■■□□□ 1.12
CTTN-212ENST00000527962 CGNL1Q0VF96 1302 aa22.05■■□□□ 1.12
CTTN-212ENST00000527962 CDCA8Q53HL2 280 aa22.04■■□□□ 1.12
CTTN-212ENST00000527962 ZNF784Q8NCA9 323 aaPredicted RBP22.04■■□□□ 1.12
CTTN-212ENST00000527962 RTL1A6NKG5 1358 aa22.03■■□□□ 1.12
CTTN-212ENST00000527962 GPR162Q16538 588 aa22.03■■□□□ 1.12
CTTN-212ENST00000527962 RAPGEF4Q8WZA2 1011 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms