RNA–Protein interactions for RNA: ENST00000527891.5

ATM-213, Transcript of ATM serine/threonine kinase, humanhuman

TSL 3

Gene ATM, Length 595 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-213ENST00000527891 ARHGEF25Q86VW2 580 aa24.55■■□□□ 1.52
ATM-213ENST00000527891 KTN1Q86UP2 1357 aaKnown RBP24.54■■□□□ 1.52
ATM-213ENST00000527891 LRRC37A3O60309 1634 aa24.54■■□□□ 1.52
ATM-213ENST00000527891 DDB1Q16531 1140 aa24.54■■□□□ 1.52
ATM-213ENST00000527891 SOX12O15370 315 aa24.53■■□□□ 1.52
ATM-213ENST00000527891 NUP188Q5SRE5 1749 aa24.52■■□□□ 1.52
ATM-213ENST00000527891 PEAK1Q9H792 1746 aa24.52■■□□□ 1.52
ATM-213ENST00000527891 NBPF14Q5TI25 921 aa24.51■■□□□ 1.51
ATM-213ENST00000527891 CARD11Q9BXL7 1154 aa24.51■■□□□ 1.51
ATM-213ENST00000527891 CDCA7Q9BWT1 371 aaPredicted RBP24.5■■□□□ 1.51
ATM-213ENST00000527891 NFAT5O94916 1531 aa24.5■■□□□ 1.51
ATM-213ENST00000527891 MON2Q7Z3U7 1717 aa24.49■■□□□ 1.51
ATM-213ENST00000527891 WNK3Q9BYP7 1800 aa24.49■■□□□ 1.51
ATM-213ENST00000527891 CSB-PGBD3P0DP91 1061 aa24.48■■□□□ 1.51
ATM-213ENST00000527891 CARD10Q9BWT7 1032 aa24.48■■□□□ 1.51
ATM-213ENST00000527891 ABCC6O95255 1503 aa24.46■■□□□ 1.51
ATM-213ENST00000527891 USP31Q70CQ4 1352 aa24.45■■□□□ 1.5
ATM-213ENST00000527891 TONSLQ96HA7 1378 aa24.45■■□□□ 1.5
ATM-213ENST00000527891 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.45■■□□□ 1.5
ATM-213ENST00000527891 CD163L1Q9NR16 1453 aa24.45■■□□□ 1.5
ATM-213ENST00000527891 RGPD5Q99666 1765 aa24.44■■□□□ 1.5
ATM-213ENST00000527891 PLSCR1O15162 318 aa24.44■■□□□ 1.5
ATM-213ENST00000527891 RGPD3A6NKT7 1758 aaPredicted RBP24.44■■□□□ 1.5
ATM-213ENST00000527891 RGPD4Q7Z3J3 1758 aa24.44■■□□□ 1.5
ATM-213ENST00000527891 BCL9O00512 1426 aa24.44■■□□□ 1.5
ATM-213ENST00000527891 MARCH10Q8NA82 808 aaPredicted RBP24.43■■□□□ 1.5
ATM-213ENST00000527891 TMC1Q8TDI8 760 aa24.43■■□□□ 1.5
ATM-213ENST00000527891 BCL11BQ9C0K0 894 aaPredicted RBP24.43■■□□□ 1.5
ATM-213ENST00000527891 CCDC7Q96M83 1385 aa24.42■■□□□ 1.5
ATM-213ENST00000527891 SBF2Q86WG5 1849 aa24.42■■□□□ 1.5
ATM-213ENST00000527891 USP54Q70EL1 1684 aa24.42■■□□□ 1.5
ATM-213ENST00000527891 HDGFL2Q7Z4V5 671 aaPredicted RBP24.41■■□□□ 1.5
ATM-213ENST00000527891 NME9Q86XW9 330 aa24.41■■□□□ 1.5
ATM-213ENST00000527891 EXOC5O00471 708 aa24.39■■□□□ 1.49
ATM-213ENST00000527891 PTF1AQ7RTS3 328 aa24.39■■□□□ 1.49
ATM-213ENST00000527891 SLC12A5Q9H2X9 1139 aa24.39■■□□□ 1.49
ATM-213ENST00000527891 EDC4Q6P2E9 1401 aaKnown RBP24.38■■□□□ 1.49
ATM-213ENST00000527891 ERBB3P21860 1342 aa24.37■■□□□ 1.49
ATM-213ENST00000527891 TNS2Q63HR2 1409 aa24.37■■□□□ 1.49
ATM-213ENST00000527891 TERF2IPQ9NYB0 399 aa24.37■■□□□ 1.49
ATM-213ENST00000527891 PUS7Q96PZ0 661 aaKnown RBP24.36■■□□□ 1.49
ATM-213ENST00000527891 A0A1W2PP64 1363 aa24.36■■□□□ 1.49
ATM-213ENST00000527891 SPON1Q9HCB6 807 aa24.35■■□□□ 1.49
ATM-213ENST00000527891 ANO8Q9HCE9 1232 aaPredicted RBP24.34■■□□□ 1.49
ATM-213ENST00000527891 KCNQ2O43526 872 aa24.33■■□□□ 1.49
ATM-213ENST00000527891 NLRP2Q9NX02 1062 aa24.33■■□□□ 1.49
ATM-213ENST00000527891 LTN1O94822 1766 aa24.33■■□□□ 1.49
ATM-213ENST00000527891 PROM2Q8N271 834 aa24.31■■□□□ 1.48
ATM-213ENST00000527891 PPP1R1BQ9UD71 204 aaPredicted RBP24.31■■□□□ 1.48
ATM-213ENST00000527891 NINLQ9Y2I6 1382 aa24.3■■□□□ 1.48
ATM-213ENST00000527891 ANKRD24Q8TF21 1146 aa24.3■■□□□ 1.48
ATM-213ENST00000527891 IL2RBP14784 551 aa24.29■■□□□ 1.48
ATM-213ENST00000527891 TESK2Q96S53 571 aa24.29■■□□□ 1.48
ATM-213ENST00000527891 ST20-MTHFSA0A0A6YYL1 179 aa24.28■■□□□ 1.48
ATM-213ENST00000527891 TXNRD1Q16881 649 aa24.28■■□□□ 1.48
ATM-213ENST00000527891 CASZ1Q86V15 1759 aa24.26■■□□□ 1.47
ATM-213ENST00000527891 SLC24A1O60721 1099 aa24.26■■□□□ 1.47
ATM-213ENST00000527891 NHSQ6T4R5 1651 aa24.26■■□□□ 1.47
ATM-213ENST00000527891 IP6K1Q92551 441 aa24.24■■□□□ 1.47
ATM-213ENST00000527891 ACSBG1Q96GR2 724 aa24.24■■□□□ 1.47
ATM-213ENST00000527891 STK32BQ9NY57 414 aa24.23■■□□□ 1.47
ATM-213ENST00000527891 COG3Q96JB2 828 aa24.22■■□□□ 1.47
ATM-213ENST00000527891 PDGFDQ9GZP0 370 aaPredicted RBP24.22■■□□□ 1.47
ATM-213ENST00000527891 SLC15A2Q16348 729 aa24.21■■□□□ 1.47
ATM-213ENST00000527891 ANKRD36BQ8N2N9 1353 aa24.19■■□□□ 1.46
ATM-213ENST00000527891 FAM208AQ9UK61 1670 aaKnown RBP24.19■■□□□ 1.46
ATM-213ENST00000527891 ZBTB7AO95365 584 aa24.19■■□□□ 1.46
ATM-213ENST00000527891 LTV1Q96GA3 475 aaPredicted RBP24.18■■□□□ 1.46
ATM-213ENST00000527891 MAP3K19Q56UN5 1328 aa24.17■■□□□ 1.46
ATM-213ENST00000527891 DCAF8L1A6NGE4 600 aa24.16■■□□□ 1.46
ATM-213ENST00000527891 HOXC9P31274 260 aa24.16■■□□□ 1.46
ATM-213ENST00000527891 AMPHP49418 695 aa24.15■■□□□ 1.46
ATM-213ENST00000527891 TMF1P82094 1093 aa24.15■■□□□ 1.46
ATM-213ENST00000527891 TRIM26Q12899 539 aaPredicted RBP24.15■■□□□ 1.46
ATM-213ENST00000527891 USP47Q96K76 1375 aa24.15■■□□□ 1.46
ATM-213ENST00000527891 BTAF1O14981 1849 aa24.14■■□□□ 1.46
ATM-213ENST00000527891 PTGER2P43116 358 aa24.14■■□□□ 1.45
ATM-213ENST00000527891 ATF5Q9Y2D1 282 aaPredicted RBP24.14■■□□□ 1.45
ATM-213ENST00000527891 PAPPAQ13219 1627 aa24.13■■□□□ 1.45
ATM-213ENST00000527891 FBLN1P23142 703 aa24.13■■□□□ 1.45
ATM-213ENST00000527891 DDX54Q8TDD1 881 aaKnown RBP24.13■■□□□ 1.45
ATM-213ENST00000527891 MYOM1P52179 1685 aa24.12■■□□□ 1.45
ATM-213ENST00000527891 YY1P25490 414 aa24.12■■□□□ 1.45
ATM-213ENST00000527891 MTFR1LQ9H019 292 aa24.12■■□□□ 1.45
ATM-213ENST00000527891 RTL1A6NKG5 1358 aa24.12■■□□□ 1.45
ATM-213ENST00000527891 FYB1O15117 783 aa24.09■■□□□ 1.45
ATM-213ENST00000527891 RRS1Q15050 365 aaKnown RBP24.08■■□□□ 1.45
ATM-213ENST00000527891 GGNBP2Q9H3C7 697 aa24.08■■□□□ 1.45
ATM-213ENST00000527891 LRRC4BQ9NT99 713 aa24.08■■□□□ 1.45
ATM-213ENST00000527891 CDCA8Q53HL2 280 aa24.07■■□□□ 1.44
ATM-213ENST00000527891 MEGF6O75095 1541 aa24.06■■□□□ 1.44
ATM-213ENST00000527891 ZNF827Q17R98 1081 aa24.06■■□□□ 1.44
ATM-213ENST00000527891 SLC27A3Q5K4L6 730 aa24.06■■□□□ 1.44
ATM-213ENST00000527891 SGIP1Q9BQI5 828 aa24.06■■□□□ 1.44
ATM-213ENST00000527891 ZCRB1Q8TBF4 217 aaKnown RBP24.05■■□□□ 1.44
ATM-213ENST00000527891 SYTL4Q96C24 671 aaPredicted RBP24.05■■□□□ 1.44
ATM-213ENST00000527891 SMG6Q86US8 1419 aaKnown RBP24.04■■□□□ 1.44
ATM-213ENST00000527891 FHDC1Q9C0D6 1143 aaPredicted RBP24.04■■□□□ 1.44
ATM-213ENST00000527891 RGPD2P0DJD1 1756 aa24.03■■□□□ 1.44
ATM-213ENST00000527891 PRIM1P49642 420 aaKnown RBP24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms