RNA–Protein interactions for RNA: ENST00000527345.1

AP002428.1-201, humanhuman

TSL 3 BASIC

Gene AP002428.1, Length 380 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP002428.1-201ENST00000527345 TREML4Q6UXN2 200 aa8.87□□□□□ -0.99
AP002428.1-201ENST00000527345 ZFP42Q96MM3 310 aa8.87□□□□□ -0.99
AP002428.1-201ENST00000527345 CDV3Q9UKY7 258 aaKnown RBP8.87□□□□□ -0.99
AP002428.1-201ENST00000527345 ZFAND3Q9H8U3 227 aa8.86□□□□□ -0.99
AP002428.1-201ENST00000527345 CCDC116Q8IYX3 515 aa8.85□□□□□ -0.99
AP002428.1-201ENST00000527345 SLC10A4Q96EP9 437 aa8.85□□□□□ -0.99
AP002428.1-201ENST00000527345 OCSTAMPQ9BR26 566 aa8.85□□□□□ -0.99
AP002428.1-201ENST00000527345 EMILIN1Q9Y6C2 1016 aa8.85□□□□□ -0.99
AP002428.1-201ENST00000527345 NDUFB9Q9Y6M9 179 aa8.85□□□□□ -0.99
AP002428.1-201ENST00000527345 ADAM32Q8TC27 787 aa8.84□□□□□ -0.99
AP002428.1-201ENST00000527345 PURBQ96QR8 312 aaKnown RBP8.84□□□□□ -0.99
AP002428.1-201ENST00000527345 KCTD15Q96SI1 283 aaPredicted RBP8.84□□□□□ -0.99
AP002428.1-201ENST00000527345 TRIM34Q9BYJ4 488 aa8.84□□□□□ -0.99
AP002428.1-201ENST00000527345 WFS1O76024 890 aa8.83□□□□□ -1
AP002428.1-201ENST00000527345 MTMR14Q8NCE2 650 aa8.83□□□□□ -1
AP002428.1-201ENST00000527345 UPP2O95045 317 aa8.82□□□□□ -1
AP002428.1-201ENST00000527345 FLIIQ13045 1269 aa8.82□□□□□ -1
AP002428.1-201ENST00000527345 GJD4Q96KN9 370 aaPredicted RBP8.82□□□□□ -1
AP002428.1-201ENST00000527345 TERTO14746 1132 aaKnown RBP8.81□□□□□ -1
AP002428.1-201ENST00000527345 NFX1Q12986 1120 aaKnown RBP8.81□□□□□ -1
AP002428.1-201ENST00000527345 PPP1R26Q5T8A7 1209 aaPredicted RBP8.81□□□□□ -1
AP002428.1-201ENST00000527345 LCE2AQ5TA79 106 aaPredicted RBP8.81□□□□□ -1
AP002428.1-201ENST00000527345 PGPEP1Q9NXJ5 209 aa8.81□□□□□ -1
AP002428.1-201ENST00000527345 SOCS7O14512 581 aa8.8□□□□□ -1
AP002428.1-201ENST00000527345 DHX9Q08211 1270 aaKnown RBP8.8□□□□□ -1
AP002428.1-201ENST00000527345 DZIP3Q86Y13 1208 aaKnown RBP8.8□□□□□ -1
AP002428.1-201ENST00000527345 MEIOBQ8N635 442 aa8.8□□□□□ -1
AP002428.1-201ENST00000527345 RAD21O60216 631 aa8.79□□□□□ -1
AP002428.1-201ENST00000527345 BMP2P12643 396 aa8.79□□□□□ -1
AP002428.1-201ENST00000527345 NBPF20Q3BBV1 942 aa8.79□□□□□ -1
AP002428.1-201ENST00000527345 C6orf118Q5T5N4 469 aa8.79□□□□□ -1
AP002428.1-201ENST00000527345 ZNF330Q9Y3S2 320 aaPredicted RBP8.79□□□□□ -1
AP002428.1-201ENST00000527345 MCM6Q14566 821 aa8.78□□□□□ -1
AP002428.1-201ENST00000527345 INTS6LQ5JSJ4 861 aaKnown RBP8.78□□□□□ -1
AP002428.1-201ENST00000527345 LINC00528Q8N1L1 170 aa8.78□□□□□ -1
AP002428.1-201ENST00000527345 TSEN34Q9BSV6 310 aaKnown RBP8.78□□□□□ -1
AP002428.1-201ENST00000527345 NXF1Q9UBU9 619 aaKnown RBP8.78□□□□□ -1
AP002428.1-201ENST00000527345 ZBBXA8MT70 800 aa8.77□□□□□ -1.01
AP002428.1-201ENST00000527345 UBTFP17480 764 aaKnown RBP8.77□□□□□ -1.01
AP002428.1-201ENST00000527345 ABL2P42684 1182 aa8.77□□□□□ -1.01
AP002428.1-201ENST00000527345 WWC1Q8IX03 1113 aa8.77□□□□□ -1.01
AP002428.1-201ENST00000527345 SLC16A10Q8TF71 515 aa8.77□□□□□ -1.01
AP002428.1-201ENST00000527345 GDPD2Q9HCC8 539 aa8.77□□□□□ -1.01
AP002428.1-201ENST00000527345 TBC1D2BQ9UPU7 963 aa8.77□□□□□ -1.01
AP002428.1-201ENST00000527345 NPAS3Q8IXF0 933 aa8.76□□□□□ -1.01
AP002428.1-201ENST00000527345 MAN1A2O60476 641 aa8.75□□□□□ -1.01
AP002428.1-201ENST00000527345 CBLBQ13191 982 aa8.75□□□□□ -1.01
AP002428.1-201ENST00000527345 Q6ZVU0 165 aa8.75□□□□□ -1.01
AP002428.1-201ENST00000527345 PCDHB9Q9Y5E1 797 aa8.75□□□□□ -1.01
AP002428.1-201ENST00000527345 NR1H3Q13133 447 aa8.74□□□□□ -1.01
AP002428.1-201ENST00000527345 SOBPA7XYQ1 873 aa8.73□□□□□ -1.01
AP002428.1-201ENST00000527345 ESPNB1AK53 854 aa8.73□□□□□ -1.01
AP002428.1-201ENST00000527345 FBXO45P0C2W1 286 aa8.73□□□□□ -1.01
AP002428.1-201ENST00000527345 RAB15P59190 212 aa8.73□□□□□ -1.01
AP002428.1-201ENST00000527345 ZNF592Q92610 1267 aa8.73□□□□□ -1.01
AP002428.1-201ENST00000527345 SEPT12Q8IYM1 358 aa8.72□□□□□ -1.01
AP002428.1-201ENST00000527345 TMPRSS4Q9NRS4 437 aa8.72□□□□□ -1.01
AP002428.1-201ENST00000527345 SOS2Q07890 1332 aaPredicted RBP8.72□□□□□ -1.01
AP002428.1-201ENST00000527345 ERVH48-1M5A8F1 160 aa8.71□□□□□ -1.02
AP002428.1-201ENST00000527345 MCCD1P59942 119 aaPredicted RBP8.71□□□□□ -1.02
AP002428.1-201ENST00000527345 TRIM52Q96A61 297 aa8.71□□□□□ -1.02
AP002428.1-201ENST00000527345 WIPF1O43516 503 aa8.7□□□□□ -1.02
AP002428.1-201ENST00000527345 VEGFBP49765 207 aa8.7□□□□□ -1.02
AP002428.1-201ENST00000527345 EIF4G2P78344 907 aaKnown RBP eCLIP8.7□□□□□ -1.02
AP002428.1-201ENST00000527345 WASHC4Q2M389 1173 aa8.7□□□□□ -1.02
AP002428.1-201ENST00000527345 COG6Q9Y2V7 657 aa8.7□□□□□ -1.02
AP002428.1-201ENST00000527345 TTLL8A6PVC2 850 aa8.69□□□□□ -1.02
AP002428.1-201ENST00000527345 H3BM21 787 aa8.69□□□□□ -1.02
AP002428.1-201ENST00000527345 SPINT1O43278 529 aa8.69□□□□□ -1.02
AP002428.1-201ENST00000527345 GIGYF1O75420 1035 aaPredicted RBP8.69□□□□□ -1.02
AP002428.1-201ENST00000527345 LCE2CQ5TA81 110 aa8.69□□□□□ -1.02
AP002428.1-201ENST00000527345 ZNF784Q8NCA9 323 aaPredicted RBP8.69□□□□□ -1.02
AP002428.1-201ENST00000527345 IRF7Q92985 503 aa8.69□□□□□ -1.02
AP002428.1-201ENST00000527345 RELBQ01201 579 aa8.68□□□□□ -1.02
AP002428.1-201ENST00000527345 VAC14Q08AM6 782 aa8.68□□□□□ -1.02
AP002428.1-201ENST00000527345 CCDC125Q86Z20 511 aa8.68□□□□□ -1.02
AP002428.1-201ENST00000527345 AGBL1Q96MI9 1066 aa8.68□□□□□ -1.02
AP002428.1-201ENST00000527345 DNMT3LQ9UJW3 386 aa8.68□□□□□ -1.02
AP002428.1-201ENST00000527345 GTF3C3Q9Y5Q9 886 aa8.68□□□□□ -1.02
AP002428.1-201ENST00000527345 LILRA1O75019 489 aa8.67□□□□□ -1.02
AP002428.1-201ENST00000527345 ADD1P35611 737 aaKnown RBP8.67□□□□□ -1.02
AP002428.1-201ENST00000527345 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.67□□□□□ -1.02
AP002428.1-201ENST00000527345 RNF20Q5VTR2 975 aa8.67□□□□□ -1.02
AP002428.1-201ENST00000527345 POM121Q96HA1 1249 aa8.67□□□□□ -1.02
AP002428.1-201ENST00000527345 FIGNL2A6NMB9 653 aa8.66□□□□□ -1.02
AP002428.1-201ENST00000527345 GPR37L1O60883 481 aa8.66□□□□□ -1.02
AP002428.1-201ENST00000527345 INSM1Q01101 510 aaPredicted RBP8.66□□□□□ -1.02
AP002428.1-201ENST00000527345 SEMA3FQ13275 785 aa8.66□□□□□ -1.02
AP002428.1-201ENST00000527345 ADH1AP07327 375 aa8.65□□□□□ -1.02
AP002428.1-201ENST00000527345 IRF5Q13568 498 aa8.65□□□□□ -1.02
AP002428.1-201ENST00000527345 ESF1Q9H501 851 aaKnown RBP8.65□□□□□ -1.02
AP002428.1-201ENST00000527345 ZNF395Q9H8N7 513 aaPredicted RBP8.65□□□□□ -1.02
AP002428.1-201ENST00000527345 INSM2Q96T92 566 aaPredicted RBP8.64□□□□□ -1.03
AP002428.1-201ENST00000527345 CYLDQ9NQC7 956 aa8.64□□□□□ -1.03
AP002428.1-201ENST00000527345 ERBB4Q15303 1308 aa8.63□□□□□ -1.03
AP002428.1-201ENST00000527345 PPFIA3O75145 1194 aa8.63□□□□□ -1.03
AP002428.1-201ENST00000527345 GMPRP36959 345 aa8.63□□□□□ -1.03
AP002428.1-201ENST00000527345 PTGIRP43119 386 aa8.63□□□□□ -1.03
AP002428.1-201ENST00000527345 CTSOP43234 321 aaPredicted RBP8.63□□□□□ -1.03
AP002428.1-201ENST00000527345 CLUAP1Q96AJ1 413 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms