RNA–Protein interactions for RNA: ENST00000526357.5

CTNND1-213, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,994 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-213ENST00000526357 GBP3Q9H0R5 595 aa11.1□□□□□ -0.63
CTNND1-213ENST00000526357 PPM1EQ8WY54 764 aa11.1□□□□□ -0.63
CTNND1-213ENST00000526357 GNAI2P04899 355 aa11.1□□□□□ -0.63
CTNND1-213ENST00000526357 CEP57L1Q8IYX8 460 aa11.1□□□□□ -0.63
CTNND1-213ENST00000526357 SMG6Q86US8 1419 aaKnown RBP11.09□□□□□ -0.63
CTNND1-213ENST00000526357 GOLGA6L10A0A0M3HER8 536 aa11.09□□□□□ -0.63
CTNND1-213ENST00000526357 FAM177BA6PVY3 158 aa11.09□□□□□ -0.63
CTNND1-213ENST00000526357 SSR1P43307 286 aaKnown RBP11.09□□□□□ -0.63
CTNND1-213ENST00000526357 SHTN1A0MZ66 631 aa11.09□□□□□ -0.63
CTNND1-213ENST00000526357 EPB41L2O43491 1005 aaKnown RBP11.09□□□□□ -0.63
CTNND1-213ENST00000526357 NF2P35240 595 aa11.09□□□□□ -0.63
CTNND1-213ENST00000526357 ZNF76P36508 570 aa11.09□□□□□ -0.63
CTNND1-213ENST00000526357 ANAPC15P60006 121 aa11.09□□□□□ -0.63
CTNND1-213ENST00000526357 WASF1Q92558 559 aa11.09□□□□□ -0.63
CTNND1-213ENST00000526357 FAM177A1Q8N128 213 aaPredicted RBP11.09□□□□□ -0.63
CTNND1-213ENST00000526357 NUP133Q8WUM0 1156 aa11.08□□□□□ -0.64
CTNND1-213ENST00000526357 RBM42Q9BTD8 480 aaKnown RBP11.08□□□□□ -0.64
CTNND1-213ENST00000526357 PPP1R12BO60237 982 aaPredicted RBP11.08□□□□□ -0.64
CTNND1-213ENST00000526357 DHX37Q8IY37 1157 aaKnown RBP11.08□□□□□ -0.64
CTNND1-213ENST00000526357 STAC3Q96MF2 364 aa11.08□□□□□ -0.64
CTNND1-213ENST00000526357 CEP63Q96MT8 703 aa11.08□□□□□ -0.64
CTNND1-213ENST00000526357 EIF5P55010 431 aaKnown RBP11.08□□□□□ -0.64
CTNND1-213ENST00000526357 CFAP45Q9UL16 551 aa11.08□□□□□ -0.64
CTNND1-213ENST00000526357 STK3Q13188 491 aa11.08□□□□□ -0.64
CTNND1-213ENST00000526357 CEP131Q9UPN4 1083 aa11.08□□□□□ -0.64
CTNND1-213ENST00000526357 CECR2Q9BXF3 1484 aa11.08□□□□□ -0.64
CTNND1-213ENST00000526357 SSBP05455 408 aaKnown RBP eCLIP11.07□□□□□ -0.641e-7■■■■■ 26.8
CTNND1-213ENST00000526357 MCM3P25205 808 aa11.07□□□□□ -0.64
CTNND1-213ENST00000526357 ZSCAN31Q96LW9 406 aaPredicted RBP11.07□□□□□ -0.64
CTNND1-213ENST00000526357 GPRASP1Q5JY77 1395 aa11.07□□□□□ -0.64
CTNND1-213ENST00000526357 UQCRHLA0A096LP55 91 aa11.07□□□□□ -0.64
CTNND1-213ENST00000526357 UQCRHP07919 91 aa11.07□□□□□ -0.64
CTNND1-213ENST00000526357 PDIA4P13667 645 aaKnown RBP11.07□□□□□ -0.64
CTNND1-213ENST00000526357 RBM5P52756 815 aaKnown RBP eCLIP11.07□□□□□ -0.64
CTNND1-213ENST00000526357 AEBP2Q6ZN18 517 aaPredicted RBP11.06□□□□□ -0.64
CTNND1-213ENST00000526357 PDCL2Q8N4E4 241 aa11.06□□□□□ -0.64
CTNND1-213ENST00000526357 SPATA32Q96LK8 384 aa11.06□□□□□ -0.64
CTNND1-213ENST00000526357 LARP1BQ659C4 914 aaKnown RBP11.06□□□□□ -0.64
CTNND1-213ENST00000526357 UPF3BQ9BZI7 483 aaKnown RBP11.06□□□□□ -0.64
CTNND1-213ENST00000526357 CTNNA3Q9UI47 895 aa11.06□□□□□ -0.64
CTNND1-213ENST00000526357 TNIP1Q15025 636 aa11.06□□□□□ -0.64
CTNND1-213ENST00000526357 MAP9Q49MG5 647 aa11.06□□□□□ -0.64
CTNND1-213ENST00000526357 CRACR2AQ9BSW2 395 aa11.06□□□□□ -0.64
CTNND1-213ENST00000526357 IMMTQ16891 758 aaKnown RBP11.06□□□□□ -0.64
CTNND1-213ENST00000526357 FHOD3Q2V2M9 1422 aa11.06□□□□□ -0.64
CTNND1-213ENST00000526357 GCOM1H8Y6P7 765 aaPredicted RBP11.06□□□□□ -0.64
CTNND1-213ENST00000526357 MYZAPP0CAP1 466 aa11.06□□□□□ -0.64
CTNND1-213ENST00000526357 SPA17Q15506 151 aa11.06□□□□□ -0.64
CTNND1-213ENST00000526357 ARHGAP29Q52LW3 1261 aa11.06□□□□□ -0.64
CTNND1-213ENST00000526357 ANKRD18BA2A2Z9 1011 aa11.05□□□□□ -0.64
CTNND1-213ENST00000526357 FEZ1Q99689 392 aa11.05□□□□□ -0.64
CTNND1-213ENST00000526357 RAPGEF2Q9Y4G8 1499 aa11.05□□□□□ -0.64
CTNND1-213ENST00000526357 CCT4P50991 539 aaKnown RBP11.05□□□□□ -0.64
CTNND1-213ENST00000526357 PNISRQ8TF01 805 aaKnown RBP11.05□□□□□ -0.64
CTNND1-213ENST00000526357 TDRD9Q8NDG6 1382 aaKnown RBP11.05□□□□□ -0.64
CTNND1-213ENST00000526357 UBAC1Q9BSL1 405 aa11.05□□□□□ -0.64
CTNND1-213ENST00000526357 SRCIN1Q9C0H9 1055 aa11.05□□□□□ -0.64
CTNND1-213ENST00000526357 KIF2AO00139 706 aaPredicted RBP11.05□□□□□ -0.64
CTNND1-213ENST00000526357 SF3B2Q13435 895 aaKnown RBP11.05□□□□□ -0.64
CTNND1-213ENST00000526357 GRIPAP1Q4V328 841 aa11.05□□□□□ -0.64
CTNND1-213ENST00000526357 PPP4R3AQ6IN85 833 aa11.05□□□□□ -0.64
CTNND1-213ENST00000526357 CCDC88BA6NC98 1476 aa11.05□□□□□ -0.64
CTNND1-213ENST00000526357 K7ELQ4 463 aaPredicted RBP11.05□□□□□ -0.64
CTNND1-213ENST00000526357 NUP62CLQ9H1M0 184 aa11.05□□□□□ -0.64
CTNND1-213ENST00000526357 PDZRN3Q9UPQ7 1066 aa11.05□□□□□ -0.64
CTNND1-213ENST00000526357 RRBP1Q9P2E9 1410 aaKnown RBP11.04□□□□□ -0.64
CTNND1-213ENST00000526357 TMCO3Q6UWJ1 677 aa11.04□□□□□ -0.64
CTNND1-213ENST00000526357 SMC1AQ14683 1233 aaKnown RBP11.04□□□□□ -0.64
CTNND1-213ENST00000526357 MICALCLQ6ZW33 695 aa11.04□□□□□ -0.64
CTNND1-213ENST00000526357 PKNOX2Q96KN3 472 aa11.04□□□□□ -0.64
CTNND1-213ENST00000526357 TSG101Q99816 390 aa11.04□□□□□ -0.64
CTNND1-213ENST00000526357 PDRG1Q9NUG6 133 aa11.04□□□□□ -0.64
CTNND1-213ENST00000526357 TOP2AP11388 1531 aaKnown RBP11.04□□□□□ -0.64
CTNND1-213ENST00000526357 PPM1FP49593 454 aaPredicted RBP11.04□□□□□ -0.64
CTNND1-213ENST00000526357 NLRP6P59044 892 aa11.04□□□□□ -0.64
CTNND1-213ENST00000526357 UBXN4Q92575 508 aa11.04□□□□□ -0.64
CTNND1-213ENST00000526357 PPP6R1Q9UPN7 881 aa11.04□□□□□ -0.64
CTNND1-213ENST00000526357 TATP17735 454 aaPredicted RBP11.03□□□□□ -0.64
CTNND1-213ENST00000526357 KRT32Q14532 448 aa11.03□□□□□ -0.64
CTNND1-213ENST00000526357 CCDC113Q9H0I3 377 aa11.03□□□□□ -0.64
CTNND1-213ENST00000526357 GGNBP2Q9H3C7 697 aa11.03□□□□□ -0.64
CTNND1-213ENST00000526357 CNTLNQ9NXG0 1405 aa11.03□□□□□ -0.64
CTNND1-213ENST00000526357 ZSCAN12O43309 604 aa11.03□□□□□ -0.64
CTNND1-213ENST00000526357 TWISTNBQ3B726 338 aaPredicted RBP11.03□□□□□ -0.64
CTNND1-213ENST00000526357 VPS36Q86VN1 386 aa11.03□□□□□ -0.64
CTNND1-213ENST00000526357 MPHOSPH8Q99549 860 aa11.03□□□□□ -0.64
CTNND1-213ENST00000526357 GRPEL1Q9HAV7 217 aa11.03□□□□□ -0.64
CTNND1-213ENST00000526357 FKBP15Q5T1M5 1219 aa11.03□□□□□ -0.64
CTNND1-213ENST00000526357 TDO2P48775 406 aa11.03□□□□□ -0.64
CTNND1-213ENST00000526357 CASQ1P31415 396 aa11.02□□□□□ -0.64
CTNND1-213ENST00000526357 NUTM2GQ5VZR2 741 aa11.02□□□□□ -0.64
CTNND1-213ENST00000526357 BLOC1S2Q6QNY1 142 aa11.02□□□□□ -0.64
CTNND1-213ENST00000526357 SPATA24Q86W54 205 aa11.02□□□□□ -0.64
CTNND1-213ENST00000526357 CCDC150Q8NCX0 1101 aa11.02□□□□□ -0.65
CTNND1-213ENST00000526357 CABP4P57796 275 aa11.02□□□□□ -0.65
CTNND1-213ENST00000526357 ZSCAN29Q8IWY8 852 aaPredicted RBP11.02□□□□□ -0.65
CTNND1-213ENST00000526357 IFFO1Q0D2I5 559 aa11.02□□□□□ -0.65
CTNND1-213ENST00000526357 HOOK3Q86VS8 718 aa11.02□□□□□ -0.65
CTNND1-213ENST00000526357 DDX11Q96FC9 970 aa11.02□□□□□ -0.65
CTNND1-213ENST00000526357 PPP1R1BQ9UD71 204 aaPredicted RBP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms