RNA–Protein interactions for RNA: ENST00000525537.2

ATM-208, Transcript of ATM serine/threonine kinase, humanhuman

TSL 4

Gene ATM, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-208ENST00000525537 FAM174AQ8TBP5 190 aa9.7□□□□□ -0.86
ATM-208ENST00000525537 ZNF592Q92610 1267 aa9.7□□□□□ -0.86
ATM-208ENST00000525537 MYT1Q01538 1121 aa9.69□□□□□ -0.86
ATM-208ENST00000525537 CRTC2Q53ET0 693 aaPredicted RBP9.69□□□□□ -0.86
ATM-208ENST00000525537 USB1Q9BQ65 265 aaKnown RBP9.69□□□□□ -0.86
ATM-208ENST00000525537 MKRN1Q9UHC7 482 aaKnown RBP9.69□□□□□ -0.86
ATM-208ENST00000525537 SALL2Q9Y467 1007 aaPredicted RBP9.69□□□□□ -0.86
ATM-208ENST00000525537 UNCXA6NJT0 531 aa9.68□□□□□ -0.86
ATM-208ENST00000525537 LCE2AQ5TA79 106 aaPredicted RBP9.68□□□□□ -0.86
ATM-208ENST00000525537 LARP1Q6PKG0 1096 aaKnown RBP9.68□□□□□ -0.86
ATM-208ENST00000525537 RNF19BQ6ZMZ0 732 aa9.68□□□□□ -0.86
ATM-208ENST00000525537 DEPDC4Q8N2C3 294 aa9.68□□□□□ -0.86
ATM-208ENST00000525537 CLP1Q92989 425 aaKnown RBP9.68□□□□□ -0.86
ATM-208ENST00000525537 ATP5J2-PTCD1G3V325 749 aa9.67□□□□□ -0.86
ATM-208ENST00000525537 LZTS3O60299 673 aaPredicted RBP9.67□□□□□ -0.86
ATM-208ENST00000525537 GGCXP38435 758 aa9.67□□□□□ -0.86
ATM-208ENST00000525537 APLP1P51693 650 aa9.67□□□□□ -0.86
ATM-208ENST00000525537 FAM69CQ0P6D2 419 aa9.67□□□□□ -0.86
ATM-208ENST00000525537 PTK7Q13308 1070 aa9.67□□□□□ -0.86
ATM-208ENST00000525537 BLOC1S3Q6QNY0 202 aa9.67□□□□□ -0.86
ATM-208ENST00000525537 FAM200AQ8TCP9 573 aa9.67□□□□□ -0.86
ATM-208ENST00000525537 PRR14Q9BWN1 585 aa9.67□□□□□ -0.86
ATM-208ENST00000525537 CDCA7Q9BWT1 371 aaPredicted RBP9.67□□□□□ -0.86
ATM-208ENST00000525537 RASA1P20936 1047 aa9.66□□□□□ -0.86
ATM-208ENST00000525537 MCCD1P59942 119 aaPredicted RBP9.66□□□□□ -0.86
ATM-208ENST00000525537 PTPRNQ16849 979 aa9.66□□□□□ -0.86
ATM-208ENST00000525537 BRICD5Q6PL45 260 aa9.66□□□□□ -0.86
ATM-208ENST00000525537 DNAJC14Q6Y2X3 702 aaPredicted RBP9.66□□□□□ -0.86
ATM-208ENST00000525537 SLAIN2Q9P270 581 aa9.66□□□□□ -0.86
ATM-208ENST00000525537 MAP10Q9P2G4 905 aa9.66□□□□□ -0.86
ATM-208ENST00000525537 CEP126Q9P2H0 1117 aa9.66□□□□□ -0.86
ATM-208ENST00000525537 GPSM3Q9Y4H4 160 aa9.66□□□□□ -0.86
ATM-208ENST00000525537 DGAT1O75907 488 aa9.65□□□□□ -0.86
ATM-208ENST00000525537 NCOA4Q13772 614 aa9.65□□□□□ -0.86
ATM-208ENST00000525537 SLFNL1Q499Z3 407 aa9.65□□□□□ -0.86
ATM-208ENST00000525537 PKDCCQ504Y2 493 aa9.65□□□□□ -0.86
ATM-208ENST00000525537 TREML4Q6UXN2 200 aa9.65□□□□□ -0.86
ATM-208ENST00000525537 SHROOM4Q9ULL8 1493 aa9.65□□□□□ -0.87
ATM-208ENST00000525537 SOWAHDA6NJG2 315 aa9.64□□□□□ -0.87
ATM-208ENST00000525537 ANKMY2Q8IV38 441 aa9.64□□□□□ -0.87
ATM-208ENST00000525537 PHTF2Q8N3S3 785 aa9.64□□□□□ -0.87
ATM-208ENST00000525537 JUNDP17535 347 aa9.63□□□□□ -0.87
ATM-208ENST00000525537 PTK2Q05397 1052 aa9.63□□□□□ -0.87
ATM-208ENST00000525537 RNF135Q8IUD6 432 aa9.63□□□□□ -0.87
ATM-208ENST00000525537 PLPP7Q8NBV4 271 aa9.63□□□□□ -0.87
ATM-208ENST00000525537 GPKOWQ92917 476 aaPredicted RBP eCLIP9.63□□□□□ -0.87
ATM-208ENST00000525537 ATP2B4P23634 1241 aa9.62□□□□□ -0.87
ATM-208ENST00000525537 SWI5Q1ZZU3 235 aa9.62□□□□□ -0.87
ATM-208ENST00000525537 PDXDC2PQ6P474 469 aa9.62□□□□□ -0.87
ATM-208ENST00000525537 IGSF5Q9NSI5 407 aa9.62□□□□□ -0.87
ATM-208ENST00000525537 CHIC2Q9UKJ5 165 aa9.62□□□□□ -0.87
ATM-208ENST00000525537 FMNL1O95466 1100 aaPredicted RBP9.61□□□□□ -0.87
ATM-208ENST00000525537 CTHP32929 405 aa9.61□□□□□ -0.87
ATM-208ENST00000525537 MAP7D1Q3KQU3 841 aa9.61□□□□□ -0.87
ATM-208ENST00000525537 ARMC2Q8NEN0 867 aa9.61□□□□□ -0.87
ATM-208ENST00000525537 EMID1Q96A84 441 aaPredicted RBP9.61□□□□□ -0.87
ATM-208ENST00000525537 THAP11Q96EK4 314 aa9.61□□□□□ -0.87
ATM-208ENST00000525537 EML3Q32P44 896 aa9.6□□□□□ -0.87
ATM-208ENST00000525537 SLC19A1P41440 591 aa9.59□□□□□ -0.87
ATM-208ENST00000525537 SERPINB4P48594 390 aa9.59□□□□□ -0.87
ATM-208ENST00000525537 COPS2P61201 443 aa9.59□□□□□ -0.87
ATM-208ENST00000525537 PRR20EP86478 221 aa9.59□□□□□ -0.87
ATM-208ENST00000525537 PRR20CP86479 221 aa9.59□□□□□ -0.87
ATM-208ENST00000525537 PRR20DP86480 221 aa9.59□□□□□ -0.87
ATM-208ENST00000525537 PRR20BP86481 221 aa9.59□□□□□ -0.87
ATM-208ENST00000525537 PRR20AP86496 221 aa9.59□□□□□ -0.87
ATM-208ENST00000525537 DPYDQ12882 1025 aa9.59□□□□□ -0.87
ATM-208ENST00000525537 SCUBE3Q8IX30 993 aa9.59□□□□□ -0.87
ATM-208ENST00000525537 OGFOD1Q8N543 542 aa9.59□□□□□ -0.87
ATM-208ENST00000525537 C1orf216Q8TAB5 229 aa9.59□□□□□ -0.87
ATM-208ENST00000525537 SIRT1Q96EB6 747 aa9.59□□□□□ -0.87
ATM-208ENST00000525537 OCSTAMPQ9BR26 566 aa9.59□□□□□ -0.87
ATM-208ENST00000525537 PCDHB9Q9Y5E1 797 aa9.59□□□□□ -0.87
ATM-208ENST00000525537 TRIM50Q86XT4 487 aa9.58□□□□□ -0.88
ATM-208ENST00000525537 NR1I2O75469 434 aa9.57□□□□□ -0.88
ATM-208ENST00000525537 CCNYL3P0C7X3 344 aa9.57□□□□□ -0.88
ATM-208ENST00000525537 ATP1A2P50993 1020 aa9.57□□□□□ -0.88
ATM-208ENST00000525537 MARSP56192 900 aaKnown RBP9.57□□□□□ -0.88
ATM-208ENST00000525537 KCNH2Q12809 1159 aa9.57□□□□□ -0.88
ATM-208ENST00000525537 NOM1Q5C9Z4 860 aaKnown RBP9.57□□□□□ -0.88
ATM-208ENST00000525537 NBPF14Q5TI25 921 aa9.57□□□□□ -0.88
ATM-208ENST00000525537 MRRFQ96E11 262 aaKnown RBP9.57□□□□□ -0.88
ATM-208ENST00000525537 EVA1BQ9NVM1 165 aa9.57□□□□□ -0.88
ATM-208ENST00000525537 KIAA1522Q9P206 1035 aaPredicted RBP9.57□□□□□ -0.88
ATM-208ENST00000525537 ZNF16P17020 682 aaPredicted RBP9.56□□□□□ -0.88
ATM-208ENST00000525537 CLDN10P78369 228 aa9.56□□□□□ -0.88
ATM-208ENST00000525537 SPRYD7Q5W111 196 aa9.56□□□□□ -0.88
ATM-208ENST00000525537 DNAAF2Q9NVR5 837 aaKnown RBP9.56□□□□□ -0.88
ATM-208ENST00000525537 RNF223E7ERA6 249 aa9.55□□□□□ -0.88
ATM-208ENST00000525537 ZPR1O75312 459 aa9.55□□□□□ -0.88
ATM-208ENST00000525537 MSS51Q4VC12 460 aa9.55□□□□□ -0.88
ATM-208ENST00000525537 LARGE2Q8N3Y3 721 aa9.55□□□□□ -0.88
ATM-208ENST00000525537 ZNF594Q96JF6 807 aaPredicted RBP9.55□□□□□ -0.88
ATM-208ENST00000525537 BCL2L13Q9BXK5 485 aa9.55□□□□□ -0.88
ATM-208ENST00000525537 NOD1Q9Y239 953 aa9.55□□□□□ -0.88
ATM-208ENST00000525537 DXOO77932 396 aaKnown RBP9.54□□□□□ -0.88
ATM-208ENST00000525537 ZNF598Q86UK7 904 aaKnown RBP9.54□□□□□ -0.88
ATM-208ENST00000525537 SIX5Q8N196 739 aa9.54□□□□□ -0.88
ATM-208ENST00000525537 ADAM32Q8TC27 787 aa9.54□□□□□ -0.88
ATM-208ENST00000525537 NUDT12Q9BQG2 462 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms