RNA–Protein interactions for RNA: ENST00000525207.1

SF3B2-204, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-204ENST00000525207 USP47Q96K76 1375 aa13.37□□□□□ -0.27
SF3B2-204ENST00000525207 FAM182BQ5T319 152 aa13.37□□□□□ -0.27
SF3B2-204ENST00000525207 KCNH5Q8NCM2 988 aa13.37□□□□□ -0.27
SF3B2-204ENST00000525207 ZRANB1Q9UGI0 708 aa13.37□□□□□ -0.27
SF3B2-204ENST00000525207 THRAP3Q9Y2W1 955 aaKnown RBP13.37□□□□□ -0.27
SF3B2-204ENST00000525207 MYOM1P52179 1685 aa13.37□□□□□ -0.27
SF3B2-204ENST00000525207 BAG6P46379 1132 aa13.36□□□□□ -0.27
SF3B2-204ENST00000525207 MAPK8IP2Q13387 824 aaPredicted RBP13.36□□□□□ -0.27
SF3B2-204ENST00000525207 ARHGEF25Q86VW2 580 aa13.36□□□□□ -0.27
SF3B2-204ENST00000525207 PUS7Q96PZ0 661 aaKnown RBP13.36□□□□□ -0.27
SF3B2-204ENST00000525207 SBF2Q86WG5 1849 aa13.36□□□□□ -0.27
SF3B2-204ENST00000525207 LRP5O75197 1615 aa13.35□□□□□ -0.27
SF3B2-204ENST00000525207 RGPD3A6NKT7 1758 aaPredicted RBP13.35□□□□□ -0.27
SF3B2-204ENST00000525207 RGPD4Q7Z3J3 1758 aa13.35□□□□□ -0.27
SF3B2-204ENST00000525207 ZBTB7CA1YPR0 619 aa13.35□□□□□ -0.27
SF3B2-204ENST00000525207 NUP188Q5SRE5 1749 aa13.35□□□□□ -0.27
SF3B2-204ENST00000525207 WDR17Q8IZU2 1322 aa13.35□□□□□ -0.27
SF3B2-204ENST00000525207 CLSPNQ9HAW4 1339 aa13.35□□□□□ -0.27
SF3B2-204ENST00000525207 FAM208AQ9UK61 1670 aaKnown RBP13.34□□□□□ -0.27
SF3B2-204ENST00000525207 ST20-MTHFSA0A0A6YYL1 179 aa13.34□□□□□ -0.27
SF3B2-204ENST00000525207 HDGFL2Q7Z4V5 671 aaPredicted RBP13.34□□□□□ -0.27
SF3B2-204ENST00000525207 TMC1Q8TDI8 760 aa13.34□□□□□ -0.27
SF3B2-204ENST00000525207 SLC12A5Q9H2X9 1139 aa13.34□□□□□ -0.27
SF3B2-204ENST00000525207 OVOS2A0A0G2JMS6 1433 aa13.33□□□□□ -0.28
SF3B2-204ENST00000525207 SOX12O15370 315 aa13.33□□□□□ -0.28
SF3B2-204ENST00000525207 FAM196AQ6ZSG2 479 aa13.33□□□□□ -0.28
SF3B2-204ENST00000525207 NME9Q86XW9 330 aa13.33□□□□□ -0.28
SF3B2-204ENST00000525207 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.33□□□□□ -0.28
SF3B2-204ENST00000525207 AXIN2Q9Y2T1 843 aa13.33□□□□□ -0.28
SF3B2-204ENST00000525207 KIF20BQ96Q89 1820 aa13.33□□□□□ -0.28
SF3B2-204ENST00000525207 TERF2IPQ9NYB0 399 aa13.32□□□□□ -0.28
SF3B2-204ENST00000525207 SRCAPQ6ZRS2 3230 aa13.32□□□□□ -0.28
SF3B2-204ENST00000525207 ANKRD36BQ8N2N9 1353 aa13.32□□□□□ -0.28
SF3B2-204ENST00000525207 TNS2Q63HR2 1409 aa13.31□□□□□ -0.28
SF3B2-204ENST00000525207 PDE3BQ13370 1112 aa13.31□□□□□ -0.28
SF3B2-204ENST00000525207 TOM1L2Q6ZVM7 507 aa13.31□□□□□ -0.28
SF3B2-204ENST00000525207 PARD3Q8TEW0 1356 aa13.31□□□□□ -0.28
SF3B2-204ENST00000525207 SLC24A1O60721 1099 aa13.3□□□□□ -0.28
SF3B2-204ENST00000525207 EN1Q05925 392 aaPredicted RBP13.3□□□□□ -0.28
SF3B2-204ENST00000525207 ERBB3P21860 1342 aa13.3□□□□□ -0.28
SF3B2-204ENST00000525207 CCDC7Q96M83 1385 aa13.3□□□□□ -0.28
SF3B2-204ENST00000525207 TRIM37O94972 964 aa13.29□□□□□ -0.28
SF3B2-204ENST00000525207 CARD10Q9BWT7 1032 aa13.28□□□□□ -0.28
SF3B2-204ENST00000525207 TIMELESSQ9UNS1 1208 aa13.28□□□□□ -0.28
SF3B2-204ENST00000525207 BCL9O00512 1426 aa13.28□□□□□ -0.28
SF3B2-204ENST00000525207 NHSQ6T4R5 1651 aa13.28□□□□□ -0.28
SF3B2-204ENST00000525207 CSB-PGBD3P0DP91 1061 aa13.27□□□□□ -0.29
SF3B2-204ENST00000525207 KCNA4P22459 653 aa13.27□□□□□ -0.29
SF3B2-204ENST00000525207 TMF1P82094 1093 aa13.27□□□□□ -0.29
SF3B2-204ENST00000525207 CDCA7Q9BWT1 371 aaPredicted RBP13.27□□□□□ -0.29
SF3B2-204ENST00000525207 C11orf95C9JLR9 678 aaPredicted RBP13.26□□□□□ -0.29
SF3B2-204ENST00000525207 EZH2Q15910 746 aaKnown RBP13.26□□□□□ -0.29
SF3B2-204ENST00000525207 DDB1Q16531 1140 aa13.26□□□□□ -0.29
SF3B2-204ENST00000525207 CAMKK2Q96RR4 588 aa13.26□□□□□ -0.29
SF3B2-204ENST00000525207 PCGF6Q9BYE7 350 aa13.25□□□□□ -0.29
SF3B2-204ENST00000525207 RGPD2P0DJD1 1756 aa13.25□□□□□ -0.29
SF3B2-204ENST00000525207 RTL1A6NKG5 1358 aa13.24□□□□□ -0.29
SF3B2-204ENST00000525207 APBA3O96018 575 aa13.24□□□□□ -0.29
SF3B2-204ENST00000525207 SHANK3Q9BYB0 1731 aa13.24□□□□□ -0.29
SF3B2-204ENST00000525207 ANKRD26Q9UPS8 1709 aa13.24□□□□□ -0.29
SF3B2-204ENST00000525207 PSDA5PKW4 1024 aaPredicted RBP13.23□□□□□ -0.29
SF3B2-204ENST00000525207 CDCA8Q53HL2 280 aa13.22□□□□□ -0.29
SF3B2-204ENST00000525207 MARCH10Q8NA82 808 aaPredicted RBP13.22□□□□□ -0.29
SF3B2-204ENST00000525207 ANKRD24Q8TF21 1146 aa13.22□□□□□ -0.29
SF3B2-204ENST00000525207 COG3Q96JB2 828 aa13.22□□□□□ -0.29
SF3B2-204ENST00000525207 MAP3K19Q56UN5 1328 aa13.21□□□□□ -0.29
SF3B2-204ENST00000525207 NSD3Q9BZ95 1437 aa13.21□□□□□ -0.3
SF3B2-204ENST00000525207 BTAF1O14981 1849 aa13.2□□□□□ -0.3
SF3B2-204ENST00000525207 R3HDM1Q15032 1099 aaKnown RBP13.2□□□□□ -0.3
SF3B2-204ENST00000525207 IP6K1Q92551 441 aa13.2□□□□□ -0.3
SF3B2-204ENST00000525207 NLRP2Q9NX02 1062 aa13.2□□□□□ -0.3
SF3B2-204ENST00000525207 CASZ1Q86V15 1759 aa13.2□□□□□ -0.3
SF3B2-204ENST00000525207 DOT1LQ8TEK3 1739 aa13.19□□□□□ -0.3
SF3B2-204ENST00000525207 IL2RBP14784 551 aa13.19□□□□□ -0.3
SF3B2-204ENST00000525207 PAPPAQ13219 1627 aa13.18□□□□□ -0.3
SF3B2-204ENST00000525207 FYB1O15117 783 aa13.18□□□□□ -0.3
SF3B2-204ENST00000525207 HOXC9P31274 260 aa13.18□□□□□ -0.3
SF3B2-204ENST00000525207 BCL11BQ9C0K0 894 aaPredicted RBP13.18□□□□□ -0.3
SF3B2-204ENST00000525207 MEGF6O75095 1541 aa13.18□□□□□ -0.3
SF3B2-204ENST00000525207 EXOC5O00471 708 aa13.17□□□□□ -0.3
SF3B2-204ENST00000525207 PLSCR1O15162 318 aa13.17□□□□□ -0.3
SF3B2-204ENST00000525207 NCBP3Q53F19 620 aaKnown RBP13.17□□□□□ -0.3
SF3B2-204ENST00000525207 PTF1AQ7RTS3 328 aa13.17□□□□□ -0.3
SF3B2-204ENST00000525207 GGNBP2Q9H3C7 697 aa13.17□□□□□ -0.3
SF3B2-204ENST00000525207 SMG6Q86US8 1419 aaKnown RBP13.16□□□□□ -0.3
SF3B2-204ENST00000525207 FBLN1P23142 703 aa13.16□□□□□ -0.3
SF3B2-204ENST00000525207 FLT4P35916 1363 aa13.16□□□□□ -0.3
SF3B2-204ENST00000525207 KIF24Q5T7B8 1368 aa13.16□□□□□ -0.3
SF3B2-204ENST00000525207 AMPHP49418 695 aa13.15□□□□□ -0.3
SF3B2-204ENST00000525207 RRS1Q15050 365 aaKnown RBP13.15□□□□□ -0.3
SF3B2-204ENST00000525207 POTEDQ86YR6 584 aa13.15□□□□□ -0.3
SF3B2-204ENST00000525207 CCER1Q8TC90 406 aaPredicted RBP13.15□□□□□ -0.3
SF3B2-204ENST00000525207 CNKSR2Q8WXI2 1034 aa13.15□□□□□ -0.3
SF3B2-204ENST00000525207 PKD1L3Q7Z443 1732 aa13.14□□□□□ -0.31
SF3B2-204ENST00000525207 LTV1Q96GA3 475 aaPredicted RBP13.14□□□□□ -0.31
SF3B2-204ENST00000525207 CARD14Q9BXL6 1004 aa13.14□□□□□ -0.31
SF3B2-204ENST00000525207 ANO8Q9HCE9 1232 aaPredicted RBP13.14□□□□□ -0.31
SF3B2-204ENST00000525207 MAP2P11137 1827 aaKnown RBP13.13□□□□□ -0.31
SF3B2-204ENST00000525207 KAT6BQ8WYB5 2073 aa13.13□□□□□ -0.31
SF3B2-204ENST00000525207 INSRP06213 1382 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms