RNA–Protein interactions for RNA: ENST00000524238.3

HMBOX1-211, Transcript of homeobox containing 1, humanhuman

TSL 2 BASIC

Gene HMBOX1, Length 1,731 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-211ENST00000524238 MCM2P49736 904 aa9.23□□□□□ -0.93
HMBOX1-211ENST00000524238 UVSSAQ2YD98 709 aa9.23□□□□□ -0.93
HMBOX1-211ENST00000524238 GTPBP4Q9BZE4 634 aaKnown RBP9.23□□□□□ -0.93
HMBOX1-211ENST00000524238 RBSNQ9H1K0 784 aa9.23□□□□□ -0.93
HMBOX1-211ENST00000524238 RPGRIP1LQ68CZ1 1315 aa9.22□□□□□ -0.93
HMBOX1-211ENST00000524238 MYRIPQ8NFW9 859 aa9.22□□□□□ -0.93
HMBOX1-211ENST00000524238 TSR2Q969E8 191 aaKnown RBP9.22□□□□□ -0.93
HMBOX1-211ENST00000524238 PLEKHF1Q96S99 279 aa9.22□□□□□ -0.93
HMBOX1-211ENST00000524238 ADGRB3O60242 1522 aa9.22□□□□□ -0.93
HMBOX1-211ENST00000524238 EFCAB6Q5THR3 1501 aa9.22□□□□□ -0.93
HMBOX1-211ENST00000524238 UHRF1BP1LA0JNW5 1464 aa9.22□□□□□ -0.93
HMBOX1-211ENST00000524238 ADGRF5Q8IZF2 1346 aa9.22□□□□□ -0.93
HMBOX1-211ENST00000524238 REC8O95072 547 aa9.22□□□□□ -0.93
HMBOX1-211ENST00000524238 PTMAP06454 111 aaKnown RBP9.22□□□□□ -0.93
HMBOX1-211ENST00000524238 PRIM1P49642 420 aaKnown RBP9.22□□□□□ -0.93
HMBOX1-211ENST00000524238 XPCQ01831 940 aaPredicted RBP9.22□□□□□ -0.93
HMBOX1-211ENST00000524238 DMTNQ08495 405 aa9.22□□□□□ -0.93
HMBOX1-211ENST00000524238 FOXD4L1Q9NU39 408 aa9.22□□□□□ -0.93
HMBOX1-211ENST00000524238 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.22□□□□□ -0.93
HMBOX1-211ENST00000524238 TRIM35Q9UPQ4 493 aa9.22□□□□□ -0.93
HMBOX1-211ENST00000524238 LMTK2Q8IWU2 1503 aa9.21□□□□□ -0.93
HMBOX1-211ENST00000524238 CD109Q6YHK3 1445 aa9.21□□□□□ -0.93
HMBOX1-211ENST00000524238 ASXL2Q76L83 1435 aa9.21□□□□□ -0.93
HMBOX1-211ENST00000524238 ZBTB7BO15156 539 aaPredicted RBP9.21□□□□□ -0.94
HMBOX1-211ENST00000524238 KIF20AO95235 890 aa9.21□□□□□ -0.94
HMBOX1-211ENST00000524238 CD2BP2O95400 341 aaKnown RBP9.21□□□□□ -0.94
HMBOX1-211ENST00000524238 GTF2F1P35269 517 aaKnown RBP eCLIP9.21□□□□□ -0.94
HMBOX1-211ENST00000524238 SLC12A5Q9H2X9 1139 aa9.21□□□□□ -0.94
HMBOX1-211ENST00000524238 ATP7AQ04656 1500 aa9.21□□□□□ -0.94
HMBOX1-211ENST00000524238 PPLO60437 1756 aa9.21□□□□□ -0.94
HMBOX1-211ENST00000524238 CDC42BPGQ6DT37 1551 aa9.2□□□□□ -0.94
HMBOX1-211ENST00000524238 LETM1O95202 739 aaPredicted RBP9.2□□□□□ -0.94
HMBOX1-211ENST00000524238 TPM3P06753 285 aa9.2□□□□□ -0.94
HMBOX1-211ENST00000524238 HAP1P54257 671 aaPredicted RBP9.2□□□□□ -0.94
HMBOX1-211ENST00000524238 TAF3Q5VWG9 929 aa9.2□□□□□ -0.94
HMBOX1-211ENST00000524238 API5Q9BZZ5 524 aaKnown RBP9.2□□□□□ -0.94
HMBOX1-211ENST00000524238 TSPY26PQ9H489 355 aa9.2□□□□□ -0.94
HMBOX1-211ENST00000524238 C14orf93Q9H972 538 aaKnown RBP9.2□□□□□ -0.94
HMBOX1-211ENST00000524238 COL3A1P02461 1466 aaPredicted RBP9.2□□□□□ -0.94
HMBOX1-211ENST00000524238 ZFYVE9O95405 1425 aa9.2□□□□□ -0.94
HMBOX1-211ENST00000524238 MROH2AA6NES4 1674 aa9.2□□□□□ -0.94
HMBOX1-211ENST00000524238 PRPF40AO75400 957 aaKnown RBP9.19□□□□□ -0.94
HMBOX1-211ENST00000524238 DNTTIP2Q5QJE6 756 aaKnown RBP9.19□□□□□ -0.94
HMBOX1-211ENST00000524238 USP26Q9BXU7 913 aa9.19□□□□□ -0.94
HMBOX1-211ENST00000524238 ADGRB1O14514 1584 aa9.19□□□□□ -0.94
HMBOX1-211ENST00000524238 U2SURPO15042 1029 aaKnown RBP9.19□□□□□ -0.94
HMBOX1-211ENST00000524238 TTC22Q5TAA0 569 aa9.19□□□□□ -0.94
HMBOX1-211ENST00000524238 ABCA9Q8IUA7 1624 aa9.19□□□□□ -0.94
HMBOX1-211ENST00000524238 ABCC4O15439 1325 aa9.18□□□□□ -0.94
HMBOX1-211ENST00000524238 FCHSD2O94868 740 aa9.18□□□□□ -0.94
HMBOX1-211ENST00000524238 GNAI1P63096 354 aa9.18□□□□□ -0.94
HMBOX1-211ENST00000524238 CHAF1AQ13111 956 aaPredicted RBP9.18□□□□□ -0.94
HMBOX1-211ENST00000524238 PIBF1Q8WXW3 757 aa9.18□□□□□ -0.94
HMBOX1-211ENST00000524238 RBM42Q9BTD8 480 aaKnown RBP9.18□□□□□ -0.94
HMBOX1-211ENST00000524238 DIAPH3Q9NSV4 1193 aa9.18□□□□□ -0.94
HMBOX1-211ENST00000524238 ATAD2Q6PL18 1390 aa9.18□□□□□ -0.94
HMBOX1-211ENST00000524238 AK9Q5TCS8 1911 aa9.17□□□□□ -0.94
HMBOX1-211ENST00000524238 DIAPH1O60610 1272 aaKnown RBP9.17□□□□□ -0.94
HMBOX1-211ENST00000524238 GPT2Q8TD30 523 aa9.17□□□□□ -0.94
HMBOX1-211ENST00000524238 INTS4Q96HW7 963 aaKnown RBP9.17□□□□□ -0.94
HMBOX1-211ENST00000524238 MROH1Q8NDA8 1641 aa9.17□□□□□ -0.94
HMBOX1-211ENST00000524238 ARHGEF28Q8N1W1 1705 aaKnown RBP9.17□□□□□ -0.94
HMBOX1-211ENST00000524238 FRMPD1Q5SYB0 1578 aa9.17□□□□□ -0.94
HMBOX1-211ENST00000524238 SYCE3A1L190 88 aa9.17□□□□□ -0.94
HMBOX1-211ENST00000524238 MCCP23508 829 aa9.17□□□□□ -0.94
HMBOX1-211ENST00000524238 LMOD3Q0VAK6 560 aa9.17□□□□□ -0.94
HMBOX1-211ENST00000524238 PLEKHM2Q8IWE5 1019 aa9.17□□□□□ -0.94
HMBOX1-211ENST00000524238 RPAP2Q8IXW5 612 aaPredicted RBP9.17□□□□□ -0.94
HMBOX1-211ENST00000524238 MRPL50Q8N5N7 158 aaKnown RBP9.17□□□□□ -0.94
HMBOX1-211ENST00000524238 DCTPP1Q9H773 170 aa9.17□□□□□ -0.94
HMBOX1-211ENST00000524238 TERF2IPQ9NYB0 399 aa9.17□□□□□ -0.94
HMBOX1-211ENST00000524238 TMEM63CQ9P1W3 806 aa9.17□□□□□ -0.94
HMBOX1-211ENST00000524238 TRAK1Q9UPV9 953 aa9.17□□□□□ -0.94
HMBOX1-211ENST00000524238 KIF3AQ9Y496 699 aa9.17□□□□□ -0.94
HMBOX1-211ENST00000524238 ZCCHC11Q5TAX3 1644 aaKnown RBP9.16□□□□□ -0.94
HMBOX1-211ENST00000524238 GLI2P10070 1586 aa9.16□□□□□ -0.94
HMBOX1-211ENST00000524238 IFT57Q9NWB7 429 aa9.16□□□□□ -0.94
HMBOX1-211ENST00000524238 PNPLA6Q8IY17 1366 aa9.16□□□□□ -0.94
HMBOX1-211ENST00000524238 TULP4Q9NRJ4 1543 aa9.15□□□□□ -0.94
HMBOX1-211ENST00000524238 KIF3BO15066 747 aa9.15□□□□□ -0.94
HMBOX1-211ENST00000524238 ERC2O15083 957 aa9.15□□□□□ -0.94
HMBOX1-211ENST00000524238 EPB41L2O43491 1005 aaKnown RBP9.15□□□□□ -0.94
HMBOX1-211ENST00000524238 NOLC1Q14978 699 aaKnown RBP eCLIP9.15□□□□□ -0.94
HMBOX1-211ENST00000524238 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.15□□□□□ -0.94
HMBOX1-211ENST00000524238 GOLGA6L6A8MZA4 724 aa9.14□□□□□ -0.95
HMBOX1-211ENST00000524238 VAMP4O75379 141 aa9.14□□□□□ -0.95
HMBOX1-211ENST00000524238 BRD1O95696 1058 aa9.14□□□□□ -0.95
HMBOX1-211ENST00000524238 GSPT1P15170 499 aaKnown RBP9.14□□□□□ -0.95
HMBOX1-211ENST00000524238 ANAPC15P60006 121 aa9.14□□□□□ -0.95
HMBOX1-211ENST00000524238 UGGT1Q9NYU2 1555 aa9.14□□□□□ -0.95
HMBOX1-211ENST00000524238 FAM135BQ49AJ0 1406 aa9.14□□□□□ -0.95
HMBOX1-211ENST00000524238 ZSCAN20P17040 1043 aaPredicted RBP9.14□□□□□ -0.95
HMBOX1-211ENST00000524238 FEZ1Q99689 392 aa9.14□□□□□ -0.95
HMBOX1-211ENST00000524238 SPTLC3Q9NUV7 552 aa9.14□□□□□ -0.95
HMBOX1-211ENST00000524238 RBM27Q9P2N5 1060 aaKnown RBP9.14□□□□□ -0.95
HMBOX1-211ENST00000524238 FKBP5Q13451 457 aaPredicted RBP9.13□□□□□ -0.95
HMBOX1-211ENST00000524238 CUL4AQ13619 759 aa9.13□□□□□ -0.95
HMBOX1-211ENST00000524238 PDCL2Q8N4E4 241 aa9.13□□□□□ -0.95
HMBOX1-211ENST00000524238 ZDHHC9Q9Y397 364 aa9.13□□□□□ -0.95
HMBOX1-211ENST00000524238 SSH2Q76I76 1423 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms