RNA–Protein interactions for RNA: ENST00000523993.5

FAM49B-228, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 3

Gene FAM49B, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-228ENST00000523993 FAM212AQ96EL1 285 aa8.69□□□□□ -1.02
FAM49B-228ENST00000523993 HIRIP3Q9BW71 556 aaPredicted RBP8.69□□□□□ -1.02
FAM49B-228ENST00000523993 BCL11BQ9C0K0 894 aaPredicted RBP8.69□□□□□ -1.02
FAM49B-228ENST00000523993 STK24Q9Y6E0 443 aa8.69□□□□□ -1.02
FAM49B-228ENST00000523993 GPRASP1Q5JY77 1395 aa8.69□□□□□ -1.02
FAM49B-228ENST00000523993 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.68□□□□□ -1.02
FAM49B-228ENST00000523993 PLEKHG3A1L390 1219 aa8.68□□□□□ -1.02
FAM49B-228ENST00000523993 CCDC125Q86Z20 511 aa8.68□□□□□ -1.02
FAM49B-228ENST00000523993 ZFP91Q96JP5 570 aaPredicted RBP8.68□□□□□ -1.02
FAM49B-228ENST00000523993 DAXXQ9UER7 740 aaPredicted RBP8.68□□□□□ -1.02
FAM49B-228ENST00000523993 NBPF1Q3BBV0 1214 aa8.67□□□□□ -1.02
FAM49B-228ENST00000523993 CABLES1Q8TDN4 633 aa8.67□□□□□ -1.02
FAM49B-228ENST00000523993 NUDT16Q96DE0 195 aaKnown RBP8.67□□□□□ -1.02
FAM49B-228ENST00000523993 RYDENQ9NUL5 291 aaKnown RBP8.67□□□□□ -1.02
FAM49B-228ENST00000523993 CCDC61Q9Y6R9 512 aa8.67□□□□□ -1.02
FAM49B-228ENST00000523993 THSD7AQ9UPZ6 1657 aa8.66□□□□□ -1.02
FAM49B-228ENST00000523993 BRD4O60885 1362 aaPredicted RBP8.66□□□□□ -1.02
FAM49B-228ENST00000523993 FAM83GA6ND36 823 aa8.66□□□□□ -1.02
FAM49B-228ENST00000523993 DCBLD2Q96PD2 775 aa8.66□□□□□ -1.02
FAM49B-228ENST00000523993 CDK19Q9BWU1 502 aa8.66□□□□□ -1.02
FAM49B-228ENST00000523993 AKAP12Q02952 1782 aa8.66□□□□□ -1.02
FAM49B-228ENST00000523993 LMO7Q8WWI1 1683 aa8.65□□□□□ -1.02
FAM49B-228ENST00000523993 NGDNQ8NEJ9 315 aaKnown RBP8.65□□□□□ -1.02
FAM49B-228ENST00000523993 L3MBTL2Q969R5 705 aa8.65□□□□□ -1.02
FAM49B-228ENST00000523993 NRKQ7Z2Y5 1582 aa8.65□□□□□ -1.03
FAM49B-228ENST00000523993 CENPJQ9HC77 1338 aaPredicted RBP8.64□□□□□ -1.03
FAM49B-228ENST00000523993 NBPF8Q3BBV2 869 aa8.64□□□□□ -1.03
FAM49B-228ENST00000523993 LMOD2Q6P5Q4 547 aa8.64□□□□□ -1.03
FAM49B-228ENST00000523993 KCNV2Q8TDN2 545 aa8.64□□□□□ -1.03
FAM49B-228ENST00000523993 SGIP1Q9BQI5 828 aa8.64□□□□□ -1.03
FAM49B-228ENST00000523993 BLMP54132 1417 aaPredicted RBP8.63□□□□□ -1.03
FAM49B-228ENST00000523993 ACEP12821 1306 aa8.63□□□□□ -1.03
FAM49B-228ENST00000523993 CHRM1P11229 460 aaPredicted RBP8.63□□□□□ -1.03
FAM49B-228ENST00000523993 FARP1Q9Y4F1 1045 aaPredicted RBP8.63□□□□□ -1.03
FAM49B-228ENST00000523993 RGPD1P0DJD0 1748 aa8.63□□□□□ -1.03
FAM49B-228ENST00000523993 PPIP5K1Q6PFW1 1433 aa8.63□□□□□ -1.03
FAM49B-228ENST00000523993 SSH2Q76I76 1423 aa8.63□□□□□ -1.03
FAM49B-228ENST00000523993 USP54Q70EL1 1684 aa8.62□□□□□ -1.03
FAM49B-228ENST00000523993 CPDO75976 1380 aa8.62□□□□□ -1.03
FAM49B-228ENST00000523993 SBNO2Q9Y2G9 1366 aa8.62□□□□□ -1.03
FAM49B-228ENST00000523993 USP19O94966 1318 aa8.62□□□□□ -1.03
FAM49B-228ENST00000523993 SEPT12Q8IYM1 358 aa8.62□□□□□ -1.03
FAM49B-228ENST00000523993 BTG4Q9NY30 223 aa8.62□□□□□ -1.03
FAM49B-228ENST00000523993 COL18A1P39060 1754 aa8.62□□□□□ -1.03
FAM49B-228ENST00000523993 PIK3C2AO00443 1686 aa8.62□□□□□ -1.03
FAM49B-228ENST00000523993 SPATA31A5Q5VU36 1347 aa8.61□□□□□ -1.03
FAM49B-228ENST00000523993 SPATA31A7Q8IWB4 1347 aa8.61□□□□□ -1.03
FAM49B-228ENST00000523993 SLIT3O75094 1523 aa8.61□□□□□ -1.03
FAM49B-228ENST00000523993 MON2Q7Z3U7 1717 aa8.61□□□□□ -1.03
FAM49B-228ENST00000523993 TNS1Q9HBL0 1735 aaKnown RBP8.61□□□□□ -1.03
FAM49B-228ENST00000523993 POTEIP0CG38 1075 aa8.61□□□□□ -1.03
FAM49B-228ENST00000523993 HOMEZQ8IX15 550 aa8.61□□□□□ -1.03
FAM49B-228ENST00000523993 RASEFQ8IZ41 740 aa8.61□□□□□ -1.03
FAM49B-228ENST00000523993 USP6P35125 1406 aa8.61□□□□□ -1.03
FAM49B-228ENST00000523993 KIAA0232Q92628 1395 aa8.61□□□□□ -1.03
FAM49B-228ENST00000523993 PARP4Q9UKK3 1724 aaKnown RBP8.6□□□□□ -1.03
FAM49B-228ENST00000523993 CAMTA1Q9Y6Y1 1673 aa8.6□□□□□ -1.03
FAM49B-228ENST00000523993 PAK3O75914 559 aaPredicted RBP8.6□□□□□ -1.03
FAM49B-228ENST00000523993 KRT27Q7Z3Y8 459 aa8.6□□□□□ -1.03
FAM49B-228ENST00000523993 SIN3AQ96ST3 1273 aa8.6□□□□□ -1.03
FAM49B-228ENST00000523993 CREBZFQ9NS37 354 aa8.6□□□□□ -1.03
FAM49B-228ENST00000523993 WNK3Q9BYP7 1800 aa8.59□□□□□ -1.03
FAM49B-228ENST00000523993 EVC2Q86UK5 1308 aa8.59□□□□□ -1.03
FAM49B-228ENST00000523993 MNX1P50219 401 aaPredicted RBP8.59□□□□□ -1.03
FAM49B-228ENST00000523993 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.59□□□□□ -1.03
FAM49B-228ENST00000523993 PRDM11Q9NQV5 511 aa8.59□□□□□ -1.03
FAM49B-228ENST00000523993 DISP2A7MBM2 1401 aa8.59□□□□□ -1.03
FAM49B-228ENST00000523993 CPSF1Q10570 1443 aaKnown RBP8.59□□□□□ -1.03
FAM49B-228ENST00000523993 ROCK2O75116 1388 aaKnown RBP8.59□□□□□ -1.03
FAM49B-228ENST00000523993 RGPD5Q99666 1765 aa8.58□□□□□ -1.04
FAM49B-228ENST00000523993 SPATA31A1Q5TZJ5 1347 aa8.58□□□□□ -1.04
FAM49B-228ENST00000523993 PYGBP11216 843 aa8.58□□□□□ -1.04
FAM49B-228ENST00000523993 BRPF1P55201 1214 aaPredicted RBP8.58□□□□□ -1.04
FAM49B-228ENST00000523993 SRPK2P78362 688 aaKnown RBP8.58□□□□□ -1.04
FAM49B-228ENST00000523993 NLRP13Q86W25 1043 aa8.58□□□□□ -1.04
FAM49B-228ENST00000523993 ABTB2Q8N961 1025 aa8.58□□□□□ -1.04
FAM49B-228ENST00000523993 CABP2Q9NPB3 220 aa8.58□□□□□ -1.04
FAM49B-228ENST00000523993 WDR70Q9NW82 654 aa8.58□□□□□ -1.04
FAM49B-228ENST00000523993 SBF2Q86WG5 1849 aa8.58□□□□□ -1.04
FAM49B-228ENST00000523993 ABCC6O95255 1503 aa8.58□□□□□ -1.04
FAM49B-228ENST00000523993 GCP02774 474 aa8.57□□□□□ -1.04
FAM49B-228ENST00000523993 FAM98CQ17RN3 349 aaKnown RBP8.57□□□□□ -1.04
FAM49B-228ENST00000523993 BARGINQ6ZT62 677 aa8.57□□□□□ -1.04
FAM49B-228ENST00000523993 CABP1Q9NZU7 370 aa8.57□□□□□ -1.04
FAM49B-228ENST00000523993 COL5A2P05997 1499 aaPredicted RBP8.57□□□□□ -1.04
FAM49B-228ENST00000523993 ZRANB1Q9UGI0 708 aa8.56□□□□□ -1.04
FAM49B-228ENST00000523993 THRAP3Q9Y2W1 955 aaKnown RBP8.56□□□□□ -1.04
FAM49B-228ENST00000523993 CCDC9Q9Y3X0 531 aaKnown RBP8.56□□□□□ -1.04
FAM49B-228ENST00000523993 PEAK1Q9H792 1746 aa8.56□□□□□ -1.04
FAM49B-228ENST00000523993 AATKQ6ZMQ8 1374 aa8.56□□□□□ -1.04
FAM49B-228ENST00000523993 RREB1Q92766 1687 aa8.56□□□□□ -1.04
FAM49B-228ENST00000523993 RGPD3A6NKT7 1758 aaPredicted RBP8.56□□□□□ -1.04
FAM49B-228ENST00000523993 RGPD4Q7Z3J3 1758 aa8.56□□□□□ -1.04
FAM49B-228ENST00000523993 LRP5O75197 1615 aa8.55□□□□□ -1.04
FAM49B-228ENST00000523993 ZC3H6P61129 1189 aaKnown RBP8.55□□□□□ -1.04
FAM49B-228ENST00000523993 CHRNA2Q15822 529 aa8.55□□□□□ -1.04
FAM49B-228ENST00000523993 PUS7Q96PZ0 661 aaKnown RBP8.55□□□□□ -1.04
FAM49B-228ENST00000523993 CD163L1Q9NR16 1453 aa8.55□□□□□ -1.04
FAM49B-228ENST00000523993 LTN1O94822 1766 aa8.55□□□□□ -1.04
FAM49B-228ENST00000523993 TTC21AQ8NDW8 1320 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms