RNA–Protein interactions for RNA: ENST00000523204.1

AP3B1-208, Transcript of adaptor related protein complex 3 subunit beta 1, humanhuman

TSL 5

Gene AP3B1, Length 776 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1-208ENST00000523204 PNMA3Q9UL41 463 aa13.89□□□□□ -0.19
AP3B1-208ENST00000523204 SLIT1O75093 1534 aa13.89□□□□□ -0.19
AP3B1-208ENST00000523204 FGD6Q6ZV73 1430 aa13.89□□□□□ -0.19
AP3B1-208ENST00000523204 PRDM15P57071 1507 aaPredicted RBP13.88□□□□□ -0.19
AP3B1-208ENST00000523204 UBR1Q8IWV7 1749 aa13.87□□□□□ -0.19
AP3B1-208ENST00000523204 TMEM2Q9UHN6 1383 aa13.87□□□□□ -0.19
AP3B1-208ENST00000523204 TSPY4P0CV99 314 aa13.87□□□□□ -0.19
AP3B1-208ENST00000523204 TSPY10P0CW01 314 aa13.87□□□□□ -0.19
AP3B1-208ENST00000523204 RBM27Q9P2N5 1060 aaKnown RBP13.87□□□□□ -0.19
AP3B1-208ENST00000523204 RGS12O14924 1447 aa13.87□□□□□ -0.19
AP3B1-208ENST00000523204 COL16A1Q07092 1604 aaPredicted RBP13.86□□□□□ -0.19
AP3B1-208ENST00000523204 TIAM1Q13009 1591 aa13.85□□□□□ -0.19
AP3B1-208ENST00000523204 NKTRP30414 1462 aaKnown RBP13.85□□□□□ -0.19
AP3B1-208ENST00000523204 C3orf80F5H4A9 247 aa13.84□□□□□ -0.19
AP3B1-208ENST00000523204 C8orf37Q96NL8 207 aa13.84□□□□□ -0.19
AP3B1-208ENST00000523204 QTRT2Q9H974 415 aaKnown RBP13.84□□□□□ -0.19
AP3B1-208ENST00000523204 RBM6P78332 1123 aaKnown RBP13.83□□□□□ -0.2
AP3B1-208ENST00000523204 RSPH4AQ5TD94 716 aa13.83□□□□□ -0.2
AP3B1-208ENST00000523204 ATAD2Q6PL18 1390 aa13.83□□□□□ -0.2
AP3B1-208ENST00000523204 CAMSAP2Q08AD1 1489 aa13.82□□□□□ -0.2
AP3B1-208ENST00000523204 HDGFP51858 240 aaKnown RBP13.82□□□□□ -0.2
AP3B1-208ENST00000523204 NUDT18Q6ZVK8 323 aa13.82□□□□□ -0.2
AP3B1-208ENST00000523204 SETBP1Q9Y6X0 1596 aa13.82□□□□□ -0.2
AP3B1-208ENST00000523204 ATF3P18847 181 aa13.8□□□□□ -0.2
AP3B1-208ENST00000523204 RNF40O75150 1001 aa13.79□□□□□ -0.2
AP3B1-208ENST00000523204 NGLY1Q96IV0 654 aa13.79□□□□□ -0.2
AP3B1-208ENST00000523204 PADI6Q6TGC4 694 aa13.78□□□□□ -0.2
AP3B1-208ENST00000523204 ARHGEF1Q92888 912 aaKnown RBP13.78□□□□□ -0.2
AP3B1-208ENST00000523204 TSHZ2Q9NRE2 1034 aa13.78□□□□□ -0.2
AP3B1-208ENST00000523204 EFCAB6Q5THR3 1501 aa13.78□□□□□ -0.2
AP3B1-208ENST00000523204 PPP1R15AO75807 674 aaPredicted RBP13.77□□□□□ -0.21
AP3B1-208ENST00000523204 NWD1Q149M9 1564 aa13.77□□□□□ -0.21
AP3B1-208ENST00000523204 EHBP1L1Q8N3D4 1523 aa13.77□□□□□ -0.21
AP3B1-208ENST00000523204 NPDC1Q9NQX5 325 aaPredicted RBP13.77□□□□□ -0.21
AP3B1-208ENST00000523204 PIK3C2BO00750 1634 aa13.76□□□□□ -0.21
AP3B1-208ENST00000523204 CEP162Q5TB80 1403 aa13.76□□□□□ -0.21
AP3B1-208ENST00000523204 TJAP1Q5JTD0 557 aa13.76□□□□□ -0.21
AP3B1-208ENST00000523204 TTC13Q8NBP0 860 aa13.76□□□□□ -0.21
AP3B1-208ENST00000523204 SHPRHQ149N8 1683 aa13.75□□□□□ -0.21
AP3B1-208ENST00000523204 ADAMTS2O95450 1211 aa13.75□□□□□ -0.21
AP3B1-208ENST00000523204 IDI1Q13907 227 aa13.75□□□□□ -0.21
AP3B1-208ENST00000523204 CEP152O94986 1710 aa13.75□□□□□ -0.21
AP3B1-208ENST00000523204 AHDC1Q5TGY3 1603 aaPredicted RBP13.75□□□□□ -0.21
AP3B1-208ENST00000523204 BRINP3Q76B58 766 aa13.74□□□□□ -0.21
AP3B1-208ENST00000523204 TET3O43151 1660 aa13.74□□□□□ -0.21
AP3B1-208ENST00000523204 KDM5AP29375 1690 aaKnown RBP13.74□□□□□ -0.21
AP3B1-208ENST00000523204 NECTIN2Q92692 538 aa13.73□□□□□ -0.21
AP3B1-208ENST00000523204 MTRQ99707 1265 aa13.73□□□□□ -0.21
AP3B1-208ENST00000523204 IL21Q9HBE4 155 aa13.73□□□□□ -0.21
AP3B1-208ENST00000523204 ARHGAP31Q2M1Z3 1444 aa13.73□□□□□ -0.21
AP3B1-208ENST00000523204 MROH1Q8NDA8 1641 aa13.72□□□□□ -0.21
AP3B1-208ENST00000523204 KCNV2Q8TDN2 545 aa13.72□□□□□ -0.21
AP3B1-208ENST00000523204 C19orf44Q9H6X5 657 aa13.72□□□□□ -0.21
AP3B1-208ENST00000523204 CFAP65Q6ZU64 1925 aaKnown RBP13.71□□□□□ -0.21
AP3B1-208ENST00000523204 MLLT3P42568 568 aaPredicted RBP13.71□□□□□ -0.21
AP3B1-208ENST00000523204 EIF2AK4Q9P2K8 1649 aaKnown RBP13.7□□□□□ -0.22
AP3B1-208ENST00000523204 ARHGEF5Q12774 1597 aa13.7□□□□□ -0.22
AP3B1-208ENST00000523204 KANK1Q14678 1352 aa13.7□□□□□ -0.22
AP3B1-208ENST00000523204 APLP1P51693 650 aa13.69□□□□□ -0.22
AP3B1-208ENST00000523204 SWT1Q5T5J6 900 aaKnown RBP13.69□□□□□ -0.22
AP3B1-208ENST00000523204 SLF2Q8IX21 1173 aa13.69□□□□□ -0.22
AP3B1-208ENST00000523204 LRRC59Q96AG4 307 aaKnown RBP13.69□□□□□ -0.22
AP3B1-208ENST00000523204 USP21Q9UK80 565 aa13.69□□□□□ -0.22
AP3B1-208ENST00000523204 DIP2AQ14689 1571 aa13.68□□□□□ -0.22
AP3B1-208ENST00000523204 NCOA3Q9Y6Q9 1424 aa13.68□□□□□ -0.22
AP3B1-208ENST00000523204 SLC4A3P48751 1232 aa13.68□□□□□ -0.22
AP3B1-208ENST00000523204 TRPC5Q9UL62 973 aaPredicted RBP13.68□□□□□ -0.22
AP3B1-208ENST00000523204 MAST1Q9Y2H9 1570 aa13.67□□□□□ -0.22
AP3B1-208ENST00000523204 CCDC125Q86Z20 511 aa13.67□□□□□ -0.22
AP3B1-208ENST00000523204 PLEKHG1Q9ULL1 1385 aa13.67□□□□□ -0.22
AP3B1-208ENST00000523204 SETD5Q9C0A6 1442 aa13.66□□□□□ -0.22
AP3B1-208ENST00000523204 DDX17Q92841 729 aaKnown RBP13.66□□□□□ -0.22
AP3B1-208ENST00000523204 RRP7BPQ9NSQ0 103 aa13.66□□□□□ -0.22
AP3B1-208ENST00000523204 ADGRB3O60242 1522 aa13.65□□□□□ -0.22
AP3B1-208ENST00000523204 ASXL1Q8IXJ9 1541 aa13.65□□□□□ -0.22
AP3B1-208ENST00000523204 DUOX2Q9NRD8 1548 aa13.65□□□□□ -0.22
AP3B1-208ENST00000523204 EYA1Q99502 592 aa13.65□□□□□ -0.22
AP3B1-208ENST00000523204 PNPLA6Q8IY17 1366 aa13.65□□□□□ -0.22
AP3B1-208ENST00000523204 KIF15Q9NS87 1388 aa13.65□□□□□ -0.22
AP3B1-208ENST00000523204 ZNF516Q92618 1163 aa13.64□□□□□ -0.23
AP3B1-208ENST00000523204 TBX22Q9Y458 520 aa13.64□□□□□ -0.23
AP3B1-208ENST00000523204 RIMS2Q9UQ26 1411 aa13.64□□□□□ -0.23
AP3B1-208ENST00000523204 Q6ZNB5 142 aa13.63□□□□□ -0.23
AP3B1-208ENST00000523204 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.62□□□□□ -0.23
AP3B1-208ENST00000523204 PTGDRQ13258 359 aa13.62□□□□□ -0.23
AP3B1-208ENST00000523204 SF3B2Q13435 895 aaKnown RBP13.62□□□□□ -0.23
AP3B1-208ENST00000523204 PPP1R18Q6NYC8 613 aa13.62□□□□□ -0.23
AP3B1-208ENST00000523204 DEFB132Q7Z7B7 95 aa13.62□□□□□ -0.23
AP3B1-208ENST00000523204 SLC52A1Q9NWF4 448 aa13.62□□□□□ -0.23
AP3B1-208ENST00000523204 ERBINQ96RT1 1412 aa13.61□□□□□ -0.23
AP3B1-208ENST00000523204 AMOTL2Q9Y2J4 779 aa13.6□□□□□ -0.23
AP3B1-208ENST00000523204 ZFYVE9O95405 1425 aa13.59□□□□□ -0.23
AP3B1-208ENST00000523204 COPS2P61201 443 aa13.59□□□□□ -0.23
AP3B1-208ENST00000523204 LAPTM4AQ15012 233 aa13.59□□□□□ -0.23
AP3B1-208ENST00000523204 PRKD2Q9BZL6 878 aa13.59□□□□□ -0.23
AP3B1-208ENST00000523204 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.58□□□□□ -0.24
AP3B1-208ENST00000523204 PRR14Q9BWN1 585 aa13.58□□□□□ -0.24
AP3B1-208ENST00000523204 CHD2O14647 1828 aaKnown RBP13.57□□□□□ -0.24
AP3B1-208ENST00000523204 ATRNO75882 1429 aa13.57□□□□□ -0.24
AP3B1-208ENST00000523204 NOS1P29475 1434 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms