RNA–Protein interactions for RNA: ENST00000522912.5

SREK1-212, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best)

Gene SREK1, Length 2,047 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-212ENST00000522912 TSR2Q969E8 191 aaKnown RBP21.89■■□□□ 1.1
SREK1-212ENST00000522912 FANCIQ9NVI1 1328 aa21.89■■□□□ 1.09
SREK1-212ENST00000522912 ABTB2Q8N961 1025 aa21.89■■□□□ 1.09
SREK1-212ENST00000522912 SBNO1A3KN83 1393 aa21.88■■□□□ 1.09
SREK1-212ENST00000522912 RARSP54136 660 aaKnown RBP21.88■■□□□ 1.09
SREK1-212ENST00000522912 HSPA2P54652 639 aa21.87■■□□□ 1.09
SREK1-212ENST00000522912 AEBP1Q8IUX7 1158 aa21.87■■□□□ 1.09
SREK1-212ENST00000522912 FLT4P35916 1363 aa21.86■■□□□ 1.09
SREK1-212ENST00000522912 KDM4FA0A1W2PPD8 638 aa21.85■■□□□ 1.09
SREK1-212ENST00000522912 SULT6B1Q6IMI4 303 aa21.85■■□□□ 1.09
SREK1-212ENST00000522912 ORAI2Q96SN7 254 aa21.85■■□□□ 1.09
SREK1-212ENST00000522912 PSME1Q06323 249 aa21.84■■□□□ 1.09
SREK1-212ENST00000522912 AMPHP49418 695 aa21.84■■□□□ 1.09
SREK1-212ENST00000522912 EXOSC9Q06265 439 aaKnown RBP21.84■■□□□ 1.09
SREK1-212ENST00000522912 C19orf44Q9H6X5 657 aa21.82■■□□□ 1.08
SREK1-212ENST00000522912 THUMPD2Q9BTF0 503 aaKnown RBP21.82■■□□□ 1.08
SREK1-212ENST00000522912 CT47B1P0C2W7 299 aaPredicted RBP21.81■■□□□ 1.08
SREK1-212ENST00000522912 ARHGEF10O15013 1369 aa21.81■■□□□ 1.08
SREK1-212ENST00000522912 C1orf167Q5SNV9 1468 aa21.8■■□□□ 1.08
SREK1-212ENST00000522912 LTN1O94822 1766 aa21.79■■□□□ 1.08
SREK1-212ENST00000522912 KIF24Q5T7B8 1368 aa21.79■■□□□ 1.08
SREK1-212ENST00000522912 FOXO3O43524 673 aa21.79■■□□□ 1.08
SREK1-212ENST00000522912 PDE3AQ14432 1141 aa21.79■■□□□ 1.08
SREK1-212ENST00000522912 BCL2L13Q9BXK5 485 aa21.79■■□□□ 1.08
SREK1-212ENST00000522912 TMEM94Q12767 1356 aa21.79■■□□□ 1.08
SREK1-212ENST00000522912 HOXC9P31274 260 aa21.79■■□□□ 1.08
SREK1-212ENST00000522912 FRAT1Q92837 279 aaPredicted RBP21.78■■□□□ 1.08
SREK1-212ENST00000522912 LMTK3Q96Q04 1460 aa21.78■■□□□ 1.08
SREK1-212ENST00000522912 NFAT5O94916 1531 aa21.77■■□□□ 1.08
SREK1-212ENST00000522912 KIF1AQ12756 1690 aa21.77■■□□□ 1.08
SREK1-212ENST00000522912 STRCQ7RTU9 1775 aa21.77■■□□□ 1.08
SREK1-212ENST00000522912 CANXP27824 592 aaKnown RBP21.77■■□□□ 1.07
SREK1-212ENST00000522912 XPCQ01831 940 aaPredicted RBP21.77■■□□□ 1.07
SREK1-212ENST00000522912 LMOD3Q0VAK6 560 aa21.77■■□□□ 1.07
SREK1-212ENST00000522912 EYA1Q99502 592 aa21.77■■□□□ 1.07
SREK1-212ENST00000522912 TRPM3Q9HCF6 1732 aaPredicted RBP21.77■■□□□ 1.07
SREK1-212ENST00000522912 FAM83GA6ND36 823 aa21.76■■□□□ 1.07
SREK1-212ENST00000522912 CALD1Q05682 793 aaKnown RBP21.76■■□□□ 1.07
SREK1-212ENST00000522912 PANK1Q8TE04 598 aa21.76■■□□□ 1.07
SREK1-212ENST00000522912 LAS1LQ9Y4W2 734 aaKnown RBP21.76■■□□□ 1.07
SREK1-212ENST00000522912 IGSF1Q8N6C5 1336 aa21.76■■□□□ 1.07
SREK1-212ENST00000522912 KDRP35968 1356 aa21.75■■□□□ 1.07
SREK1-212ENST00000522912 ZNF853P0CG23 659 aa21.75■■□□□ 1.07
SREK1-212ENST00000522912 NCOA3Q9Y6Q9 1424 aa21.75■■□□□ 1.07
SREK1-212ENST00000522912 IFT57Q9NWB7 429 aa21.74■■□□□ 1.07
SREK1-212ENST00000522912 TNNQ9UQP3 1299 aa21.74■■□□□ 1.07
SREK1-212ENST00000522912 MST1RQ04912 1400 aa21.74■■□□□ 1.07
SREK1-212ENST00000522912 DCTN1Q14203 1278 aa21.73■■□□□ 1.07
SREK1-212ENST00000522912 GNAI1P63096 354 aa21.73■■□□□ 1.07
SREK1-212ENST00000522912 RTL1A6NKG5 1358 aa21.72■■□□□ 1.07
SREK1-212ENST00000522912 ATF3P18847 181 aa21.72■■□□□ 1.07
SREK1-212ENST00000522912 SSH1Q8WYL5 1049 aa21.72■■□□□ 1.07
SREK1-212ENST00000522912 DCCP43146 1447 aa21.72■■□□□ 1.07
SREK1-212ENST00000522912 KRT28Q7Z3Y7 464 aa21.72■■□□□ 1.07
SREK1-212ENST00000522912 XIRP1Q702N8 1843 aaKnown RBP21.71■■□□□ 1.07
SREK1-212ENST00000522912 RLBP1P12271 317 aa21.71■■□□□ 1.07
SREK1-212ENST00000522912 COG6Q9Y2V7 657 aa21.71■■□□□ 1.07
SREK1-212ENST00000522912 CFAP44Q96MT7 982 aa21.7■■□□□ 1.06
SREK1-212ENST00000522912 MBIPQ9NS73 344 aa21.7■■□□□ 1.06
SREK1-212ENST00000522912 SMC4Q9NTJ3 1288 aa21.7■■□□□ 1.06
SREK1-212ENST00000522912 RBM19Q9Y4C8 960 aaKnown RBP21.7■■□□□ 1.06
SREK1-212ENST00000522912 KCNH5Q8NCM2 988 aa21.7■■□□□ 1.06
SREK1-212ENST00000522912 IP6K1Q92551 441 aa21.7■■□□□ 1.06
SREK1-212ENST00000522912 KDM2BQ8NHM5 1336 aa21.7■■□□□ 1.06
SREK1-212ENST00000522912 SLIT3O75094 1523 aa21.69■■□□□ 1.06
SREK1-212ENST00000522912 PHRF1Q9P1Y6 1649 aaKnown RBP21.69■■□□□ 1.06
SREK1-212ENST00000522912 LTV1Q96GA3 475 aaPredicted RBP21.69■■□□□ 1.06
SREK1-212ENST00000522912 MTHFSDQ2M296 383 aaKnown RBP21.68■■□□□ 1.06
SREK1-212ENST00000522912 ZKSCAN2Q63HK3 967 aa21.67■■□□□ 1.06
SREK1-212ENST00000522912 ALS2Q96Q42 1657 aa21.67■■□□□ 1.06
SREK1-212ENST00000522912 GCP02774 474 aa21.67■■□□□ 1.06
SREK1-212ENST00000522912 MCM10Q7L590 875 aa21.67■■□□□ 1.06
SREK1-212ENST00000522912 LMOD2Q6P5Q4 547 aa21.66■■□□□ 1.06
SREK1-212ENST00000522912 TSPYL6Q8N831 410 aa21.66■■□□□ 1.06
SREK1-212ENST00000522912 CLUAP1Q96AJ1 413 aa21.66■■□□□ 1.06
SREK1-212ENST00000522912 USP19O94966 1318 aa21.65■■□□□ 1.06
SREK1-212ENST00000522912 VAMP4O75379 141 aa21.65■■□□□ 1.06
SREK1-212ENST00000522912 ALDH1L2Q3SY69 923 aa21.65■■□□□ 1.06
SREK1-212ENST00000522912 CADPS2Q86UW7 1296 aa21.65■■□□□ 1.06
SREK1-212ENST00000522912 RGPD2P0DJD1 1756 aa21.64■■□□□ 1.05
SREK1-212ENST00000522912 DDX17Q92841 729 aaKnown RBP21.64■■□□□ 1.05
SREK1-212ENST00000522912 ZBTB7CA1YPR0 619 aa21.63■■□□□ 1.05
SREK1-212ENST00000522912 PLEKHG5O94827 1062 aa21.63■■□□□ 1.05
SREK1-212ENST00000522912 CENPQQ7L2Z9 268 aaPredicted RBP21.63■■□□□ 1.05
SREK1-212ENST00000522912 ARHGEF25Q86VW2 580 aa21.63■■□□□ 1.05
SREK1-212ENST00000522912 ZNF428Q96B54 188 aa21.63■■□□□ 1.05
SREK1-212ENST00000522912 NOB1Q9ULX3 412 aaKnown RBP21.63■■□□□ 1.05
SREK1-212ENST00000522912 MSH6P52701 1360 aa21.63■■□□□ 1.05
SREK1-212ENST00000522912 DZIP1LQ8IYY4 767 aaKnown RBP21.63■■□□□ 1.05
SREK1-212ENST00000522912 TRIM27P14373 513 aa21.62■■□□□ 1.05
SREK1-212ENST00000522912 CRB1P82279 1406 aa21.62■■□□□ 1.05
SREK1-212ENST00000522912 C8orf58Q8NAV2 365 aa21.62■■□□□ 1.05
SREK1-212ENST00000522912 CHL1O00533 1208 aa21.62■■□□□ 1.05
SREK1-212ENST00000522912 ATF7IPQ6VMQ6 1270 aa21.62■■□□□ 1.05
SREK1-212ENST00000522912 USHBP1Q8N6Y0 703 aa21.62■■□□□ 1.05
SREK1-212ENST00000522912 GAS2L2Q8NHY3 880 aa21.62■■□□□ 1.05
SREK1-212ENST00000522912 ELL2O00472 640 aaPredicted RBP21.61■■□□□ 1.05
SREK1-212ENST00000522912 BRPF1P55201 1214 aaPredicted RBP21.61■■□□□ 1.05
SREK1-212ENST00000522912 MS4A1P11836 297 aa21.6■■□□□ 1.05
SREK1-212ENST00000522912 MVPQ14764 893 aaKnown RBP21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms