RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 LOC102724159A0A0B4J2E5 919 aa5.71□□□□□ -1.5
SKP1-209ENST00000522552 TLDC2A0PJX2 215 aa5.71□□□□□ -1.5
SKP1-209ENST00000522552 DDX11L8A8MPP1 907 aa5.71□□□□□ -1.5
SKP1-209ENST00000522552 SCAMP3O14828 347 aaKnown RBP5.71□□□□□ -1.5
SKP1-209ENST00000522552 EIF4G2P78344 907 aaKnown RBP eCLIP5.71□□□□□ -1.5
SKP1-209ENST00000522552 RAD51AP2Q09MP3 1159 aa5.71□□□□□ -1.5
SKP1-209ENST00000522552 PWP2Q15269 919 aaKnown RBP5.71□□□□□ -1.5
SKP1-209ENST00000522552 SULF1Q8IWU6 871 aa5.71□□□□□ -1.5
SKP1-209ENST00000522552 TATDN2Q93075 761 aa5.71□□□□□ -1.5
SKP1-209ENST00000522552 GPATCH3Q96I76 525 aa5.71□□□□□ -1.5
SKP1-209ENST00000522552 CDCA7Q9BWT1 371 aaPredicted RBP5.71□□□□□ -1.5
SKP1-209ENST00000522552 RCCD1A6NED2 376 aa5.7□□□□□ -1.5
SKP1-209ENST00000522552 PLEKHD1A6NEE1 506 aa5.7□□□□□ -1.5
SKP1-209ENST00000522552 NBPF26B4DH59 902 aa5.7□□□□□ -1.5
SKP1-209ENST00000522552 MRPL58Q14197 206 aaKnown RBP5.7□□□□□ -1.5
SKP1-209ENST00000522552 HELBQ8NG08 1087 aaPredicted RBP5.7□□□□□ -1.5
SKP1-209ENST00000522552 WNT2BQ93097 391 aa5.7□□□□□ -1.5
SKP1-209ENST00000522552 ASB16Q96NS5 453 aa5.7□□□□□ -1.5
SKP1-209ENST00000522552 BCL11AQ9H165 835 aa5.7□□□□□ -1.5
SKP1-209ENST00000522552 RBM27Q9P2N5 1060 aaKnown RBP5.7□□□□□ -1.5
SKP1-209ENST00000522552 USP17L5A8MUK1 530 aa5.69□□□□□ -1.5
SKP1-209ENST00000522552 H3BRB1 525 aa5.69□□□□□ -1.5
SKP1-209ENST00000522552 MAPK1P28482 360 aa5.69□□□□□ -1.5
SKP1-209ENST00000522552 PTPN5P54829 565 aa5.69□□□□□ -1.5
SKP1-209ENST00000522552 PTK7Q13308 1070 aa5.69□□□□□ -1.5
SKP1-209ENST00000522552 TICAM2Q86XR7 235 aa5.69□□□□□ -1.5
SKP1-209ENST00000522552 PLEKHM2Q8IWE5 1019 aa5.69□□□□□ -1.5
SKP1-209ENST00000522552 LARGE2Q8N3Y3 721 aa5.69□□□□□ -1.5
SKP1-209ENST00000522552 NFATC2IPQ8NCF5 419 aa5.69□□□□□ -1.5
SKP1-209ENST00000522552 FAM200AQ8TCP9 573 aa5.69□□□□□ -1.5
SKP1-209ENST00000522552 TSC1Q92574 1164 aa5.69□□□□□ -1.5
SKP1-209ENST00000522552 DHX38Q92620 1227 aaKnown RBP5.69□□□□□ -1.5
SKP1-209ENST00000522552 ZFRQ96KR1 1074 aaKnown RBP5.69□□□□□ -1.5
SKP1-209ENST00000522552 TINF2Q9BSI4 451 aa5.69□□□□□ -1.5
SKP1-209ENST00000522552 TUT1Q9H6E5 874 aaKnown RBP5.69□□□□□ -1.5
SKP1-209ENST00000522552 SUGT1Q9Y2Z0 365 aa5.69□□□□□ -1.5
SKP1-209ENST00000522552 LZTS3O60299 673 aaPredicted RBP5.69□□□□□ -1.5
SKP1-209ENST00000522552 BCAMP50895 628 aa5.69□□□□□ -1.5
SKP1-209ENST00000522552 FAM98CQ17RN3 349 aaKnown RBP5.69□□□□□ -1.5
SKP1-209ENST00000522552 CCDC144BQ3MJ40 725 aa5.69□□□□□ -1.5
SKP1-209ENST00000522552 LDLRAD1Q5T700 205 aa5.69□□□□□ -1.5
SKP1-209ENST00000522552 EGFLAMQ63HQ2 1017 aa5.69□□□□□ -1.5
SKP1-209ENST00000522552 DEPDC4Q8N2C3 294 aa5.69□□□□□ -1.5
SKP1-209ENST00000522552 RNF40O75150 1001 aa5.68□□□□□ -1.5
SKP1-209ENST00000522552 ABL1P00519 1130 aa5.68□□□□□ -1.5
SKP1-209ENST00000522552 FDX1P10109 184 aa5.68□□□□□ -1.5
SKP1-209ENST00000522552 SKIP12755 728 aa5.68□□□□□ -1.5
SKP1-209ENST00000522552 ZNF211Q13398 564 aaPredicted RBP5.68□□□□□ -1.5
SKP1-209ENST00000522552 TAF7LQ5H9L4 462 aa5.68□□□□□ -1.5
SKP1-209ENST00000522552 SDE2Q6IQ49 451 aa5.68□□□□□ -1.5
SKP1-209ENST00000522552 PNMA1Q8ND90 353 aa5.68□□□□□ -1.5
SKP1-209ENST00000522552 C1orf216Q8TAB5 229 aa5.68□□□□□ -1.5
SKP1-209ENST00000522552 PRDM16Q9HAZ2 1276 aa5.68□□□□□ -1.5
SKP1-209ENST00000522552 PRKAG2Q9UGJ0 569 aa5.68□□□□□ -1.5
SKP1-209ENST00000522552 MKRN1Q9UHC7 482 aaKnown RBP5.68□□□□□ -1.5
SKP1-209ENST00000522552 EGFL7Q9UHF1 273 aa5.68□□□□□ -1.5
SKP1-209ENST00000522552 PCDHGC3Q9UN70 934 aa5.68□□□□□ -1.5
SKP1-209ENST00000522552 CLSTN1O94985 981 aa5.67□□□□□ -1.5
SKP1-209ENST00000522552 RASA1P20936 1047 aa5.67□□□□□ -1.5
SKP1-209ENST00000522552 COL19A1Q14993 1142 aa5.67□□□□□ -1.5
SKP1-209ENST00000522552 NR6A1Q15406 480 aa5.67□□□□□ -1.5
SKP1-209ENST00000522552 EAPPQ56P03 285 aaPredicted RBP5.67□□□□□ -1.5
SKP1-209ENST00000522552 LARP1Q6PKG0 1096 aaKnown RBP5.67□□□□□ -1.5
SKP1-209ENST00000522552 LAPTM4BQ86VI4 370 aa5.67□□□□□ -1.5
SKP1-209ENST00000522552 NT5DC4Q86YG4 428 aa5.67□□□□□ -1.5
SKP1-209ENST00000522552 ANKK1Q8NFD2 765 aa5.67□□□□□ -1.5
SKP1-209ENST00000522552 ANO2Q9NQ90 1003 aa5.67□□□□□ -1.5
SKP1-209ENST00000522552 BCCIPQ9P287 314 aaKnown RBP eCLIP5.67□□□□□ -1.5
SKP1-209ENST00000522552 DCTN4Q9UJW0 460 aa5.67□□□□□ -1.5
SKP1-209ENST00000522552 CFAP99D6REC4 459 aa5.66□□□□□ -1.5
SKP1-209ENST00000522552 HOXA2O43364 376 aa5.66□□□□□ -1.5
SKP1-209ENST00000522552 ICMTO60725 284 aa5.66□□□□□ -1.5
SKP1-209ENST00000522552 RGS20O76081 388 aa5.66□□□□□ -1.5
SKP1-209ENST00000522552 SWI5Q1ZZU3 235 aa5.66□□□□□ -1.5
SKP1-209ENST00000522552 SAMD7Q7Z3H4 446 aa5.66□□□□□ -1.5
SKP1-209ENST00000522552 METTL16Q86W50 562 aaKnown RBP5.66□□□□□ -1.5
SKP1-209ENST00000522552 ANKMY2Q8IV38 441 aa5.66□□□□□ -1.5
SKP1-209ENST00000522552 GLYCTKQ8IVS8 523 aa5.66□□□□□ -1.5
SKP1-209ENST00000522552 SLF2Q8IX21 1173 aa5.66□□□□□ -1.5
SKP1-209ENST00000522552 SPACA7Q96KW9 195 aa5.66□□□□□ -1.5
SKP1-209ENST00000522552 SLC52A1Q9NWF4 448 aa5.66□□□□□ -1.5
SKP1-209ENST00000522552 KLHL42Q9P2K6 505 aa5.66□□□□□ -1.5
SKP1-209ENST00000522552 TBX22Q9Y458 520 aa5.66□□□□□ -1.5
SKP1-209ENST00000522552 ATP2B1P20020 1258 aa5.66□□□□□ -1.5
SKP1-209ENST00000522552 GTF2F1P35269 517 aaKnown RBP eCLIP5.66□□□□□ -1.5
SKP1-209ENST00000522552 MTMR2Q13614 643 aa5.66□□□□□ -1.5
SKP1-209ENST00000522552 THSD4Q6ZMP0 1018 aa5.66□□□□□ -1.5
SKP1-209ENST00000522552 ZSCAN29Q8IWY8 852 aaPredicted RBP5.66□□□□□ -1.5
SKP1-209ENST00000522552 FAM174AQ8TBP5 190 aa5.66□□□□□ -1.5
SKP1-209ENST00000522552 EYA1Q99502 592 aa5.66□□□□□ -1.5
SKP1-209ENST00000522552 PIF1Q9H611 641 aa5.66□□□□□ -1.5
SKP1-209ENST00000522552 METTL14Q9HCE5 456 aaKnown RBP5.66□□□□□ -1.5
SKP1-209ENST00000522552 IQSEC3Q9UPP2 1182 aaPredicted RBP5.66□□□□□ -1.5
SKP1-209ENST00000522552 GUCA2AQ02747 115 aa5.65□□□□□ -1.51
SKP1-209ENST00000522552 NR1H3Q13133 447 aa5.65□□□□□ -1.51
SKP1-209ENST00000522552 ECM1Q16610 540 aa5.65□□□□□ -1.51
SKP1-209ENST00000522552 NLGN1Q8N2Q7 840 aa5.65□□□□□ -1.51
SKP1-209ENST00000522552 SLC43A3Q8NBI5 491 aa5.65□□□□□ -1.51
SKP1-209ENST00000522552 LRCH3Q96II8 777 aa5.65□□□□□ -1.51
SKP1-209ENST00000522552 MYH16Q9H6N6 1097 aa5.65□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms