RNA–Protein interactions for RNA: ENST00000520944.5

SNHG6-203, Transcript of small nucleolar RNA host gene 6, humanhuman

TSL 1 (best) BASIC

Gene SNHG6, Length 638 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG6-203ENST00000520944 USP31Q70CQ4 1352 aa28.84■■■□□ 2.21
SNHG6-203ENST00000520944 CD163L1Q9NR16 1453 aa28.84■■■□□ 2.21
SNHG6-203ENST00000520944 APBA3O96018 575 aa28.83■■■□□ 2.21
SNHG6-203ENST00000520944 PCGF6Q9BYE7 350 aa28.83■■■□□ 2.21
SNHG6-203ENST00000520944 C11orf95C9JLR9 678 aaPredicted RBP28.82■■■□□ 2.2
SNHG6-203ENST00000520944 EDC4Q6P2E9 1401 aaKnown RBP28.81■■■□□ 2.2
SNHG6-203ENST00000520944 DDB1Q16531 1140 aa28.81■■■□□ 2.2
SNHG6-203ENST00000520944 CDCA7Q9BWT1 371 aaPredicted RBP28.81■■■□□ 2.2
SNHG6-203ENST00000520944 RGPD1P0DJD0 1748 aa28.8■■■□□ 2.2
SNHG6-203ENST00000520944 A0A1W2PP64 1363 aa28.8■■■□□ 2.2
SNHG6-203ENST00000520944 NINLQ9Y2I6 1382 aa28.8■■■□□ 2.2
SNHG6-203ENST00000520944 TIMELESSQ9UNS1 1208 aa28.8■■■□□ 2.2
SNHG6-203ENST00000520944 CARD10Q9BWT7 1032 aa28.79■■■□□ 2.2
SNHG6-203ENST00000520944 DISP2A7MBM2 1401 aa28.78■■■□□ 2.2
SNHG6-203ENST00000520944 MON2Q7Z3U7 1717 aa28.78■■■□□ 2.2
SNHG6-203ENST00000520944 TMF1P82094 1093 aa28.78■■■□□ 2.2
SNHG6-203ENST00000520944 EZH2Q15910 746 aaKnown RBP28.78■■■□□ 2.2
SNHG6-203ENST00000520944 COL18A1P39060 1754 aa28.77■■■□□ 2.2
SNHG6-203ENST00000520944 NFAT5O94916 1531 aa28.76■■■□□ 2.19
SNHG6-203ENST00000520944 CAMKK2Q96RR4 588 aa28.76■■■□□ 2.19
SNHG6-203ENST00000520944 USP47Q96K76 1375 aa28.75■■■□□ 2.19
SNHG6-203ENST00000520944 CLSPNQ9HAW4 1339 aa28.75■■■□□ 2.19
SNHG6-203ENST00000520944 PSDA5PKW4 1024 aaPredicted RBP28.75■■■□□ 2.19
SNHG6-203ENST00000520944 PARD3Q8TEW0 1356 aa28.72■■■□□ 2.19
SNHG6-203ENST00000520944 PARP4Q9UKK3 1724 aaKnown RBP28.72■■■□□ 2.19
SNHG6-203ENST00000520944 OVOS2A0A0G2JMS6 1433 aa28.71■■■□□ 2.19
SNHG6-203ENST00000520944 OVOS2A0A0J9YW53 1432 aa28.71■■■□□ 2.19
SNHG6-203ENST00000520944 OVOS2Q6IE36 1432 aa28.71■■■□□ 2.19
SNHG6-203ENST00000520944 CDCA8Q53HL2 280 aa28.71■■■□□ 2.19
SNHG6-203ENST00000520944 CCDC7Q96M83 1385 aa28.71■■■□□ 2.19
SNHG6-203ENST00000520944 EXOC5O00471 708 aa28.7■■■□□ 2.18
SNHG6-203ENST00000520944 COG3Q96JB2 828 aa28.7■■■□□ 2.18
SNHG6-203ENST00000520944 NLRP2Q9NX02 1062 aa28.7■■■□□ 2.18
SNHG6-203ENST00000520944 ABCC6O95255 1503 aa28.69■■■□□ 2.18
SNHG6-203ENST00000520944 R3HDM1Q15032 1099 aaKnown RBP28.69■■■□□ 2.18
SNHG6-203ENST00000520944 TNS1Q9HBL0 1735 aaKnown RBP28.69■■■□□ 2.18
SNHG6-203ENST00000520944 ANKRD24Q8TF21 1146 aa28.67■■■□□ 2.18
SNHG6-203ENST00000520944 ERBB3P21860 1342 aa28.67■■■□□ 2.18
SNHG6-203ENST00000520944 ANKRD36BQ8N2N9 1353 aa28.66■■■□□ 2.18
SNHG6-203ENST00000520944 MARCH10Q8NA82 808 aaPredicted RBP28.66■■■□□ 2.18
SNHG6-203ENST00000520944 NBPF14Q5TI25 921 aa28.64■■■□□ 2.18
SNHG6-203ENST00000520944 USP54Q70EL1 1684 aa28.64■■■□□ 2.17
SNHG6-203ENST00000520944 RGPD5Q99666 1765 aa28.63■■■□□ 2.17
SNHG6-203ENST00000520944 IP6K1Q92551 441 aa28.63■■■□□ 2.17
SNHG6-203ENST00000520944 BCL11BQ9C0K0 894 aaPredicted RBP28.63■■■□□ 2.17
SNHG6-203ENST00000520944 LRRC37A3O60309 1634 aa28.61■■■□□ 2.17
SNHG6-203ENST00000520944 IL2RBP14784 551 aa28.6■■■□□ 2.17
SNHG6-203ENST00000520944 PLSCR1O15162 318 aa28.58■■■□□ 2.17
SNHG6-203ENST00000520944 AMPHP49418 695 aa28.58■■■□□ 2.17
SNHG6-203ENST00000520944 CCER1Q8TC90 406 aaPredicted RBP28.58■■■□□ 2.17
SNHG6-203ENST00000520944 LTV1Q96GA3 475 aaPredicted RBP28.58■■■□□ 2.17
SNHG6-203ENST00000520944 BCL9O00512 1426 aa28.57■■■□□ 2.16
SNHG6-203ENST00000520944 FYB1O15117 783 aa28.56■■■□□ 2.16
SNHG6-203ENST00000520944 GGNBP2Q9H3C7 697 aa28.56■■■□□ 2.16
SNHG6-203ENST00000520944 PEAK1Q9H792 1746 aa28.55■■■□□ 2.16
SNHG6-203ENST00000520944 MAP3K19Q56UN5 1328 aa28.55■■■□□ 2.16
SNHG6-203ENST00000520944 LTN1O94822 1766 aa28.55■■■□□ 2.16
SNHG6-203ENST00000520944 FBLN1P23142 703 aa28.54■■■□□ 2.16
SNHG6-203ENST00000520944 HOXC9P31274 260 aa28.54■■■□□ 2.16
SNHG6-203ENST00000520944 PTF1AQ7RTS3 328 aa28.54■■■□□ 2.16
SNHG6-203ENST00000520944 TNS2Q63HR2 1409 aa28.53■■■□□ 2.16
SNHG6-203ENST00000520944 WNK3Q9BYP7 1800 aa28.52■■■□□ 2.16
SNHG6-203ENST00000520944 RRS1Q15050 365 aaKnown RBP28.48■■■□□ 2.15
SNHG6-203ENST00000520944 LRP5O75197 1615 aa28.47■■■□□ 2.15
SNHG6-203ENST00000520944 RREB1Q92766 1687 aa28.46■■■□□ 2.15
SNHG6-203ENST00000520944 KCNQ2O43526 872 aa28.46■■■□□ 2.15
SNHG6-203ENST00000520944 ACSBG1Q96GR2 724 aa28.46■■■□□ 2.15
SNHG6-203ENST00000520944 POLR3GLQ9BT43 218 aa28.45■■■□□ 2.14
SNHG6-203ENST00000520944 CARD14Q9BXL6 1004 aa28.45■■■□□ 2.14
SNHG6-203ENST00000520944 SBF2Q86WG5 1849 aa28.45■■■□□ 2.14
SNHG6-203ENST00000520944 EIF4G2P78344 907 aaKnown RBP eCLIP28.44■■■□□ 2.14
SNHG6-203ENST00000520944 DDX54Q8TDD1 881 aaKnown RBP28.44■■■□□ 2.14
SNHG6-203ENST00000520944 RTL1A6NKG5 1358 aa28.44■■■□□ 2.14
SNHG6-203ENST00000520944 PROM2Q8N271 834 aa28.43■■■□□ 2.14
SNHG6-203ENST00000520944 NUP188Q5SRE5 1749 aa28.43■■■□□ 2.14
SNHG6-203ENST00000520944 TXNRD1Q16881 649 aa28.42■■■□□ 2.14
SNHG6-203ENST00000520944 NSD3Q9BZ95 1437 aa28.41■■■□□ 2.14
SNHG6-203ENST00000520944 SMG6Q86US8 1419 aaKnown RBP28.39■■■□□ 2.14
SNHG6-203ENST00000520944 RGPD3A6NKT7 1758 aaPredicted RBP28.37■■■□□ 2.13
SNHG6-203ENST00000520944 RGPD4Q7Z3J3 1758 aa28.37■■■□□ 2.13
SNHG6-203ENST00000520944 HSPA5P11021 654 aaKnown RBP28.37■■■□□ 2.13
SNHG6-203ENST00000520944 HSP90AB2PQ58FF8 381 aa28.37■■■□□ 2.13
SNHG6-203ENST00000520944 NBPF6Q5VWK0 638 aa28.37■■■□□ 2.13
SNHG6-203ENST00000520944 ZCRB1Q8TBF4 217 aaKnown RBP28.37■■■□□ 2.13
SNHG6-203ENST00000520944 NBPF4Q96M43 638 aa28.37■■■□□ 2.13
SNHG6-203ENST00000520944 CGNL1Q0VF96 1302 aa28.37■■■□□ 2.13
SNHG6-203ENST00000520944 SPON1Q9HCB6 807 aa28.36■■■□□ 2.13
SNHG6-203ENST00000520944 ANO8Q9HCE9 1232 aaPredicted RBP28.36■■■□□ 2.13
SNHG6-203ENST00000520944 STK32BQ9NY57 414 aa28.36■■■□□ 2.13
SNHG6-203ENST00000520944 FAM208AQ9UK61 1670 aaKnown RBP28.35■■■□□ 2.13
SNHG6-203ENST00000520944 RAPGEF4Q8WZA2 1011 aa28.35■■■□□ 2.13
SNHG6-203ENST00000520944 FLT4P35916 1363 aa28.35■■■□□ 2.13
SNHG6-203ENST00000520944 KIF24Q5T7B8 1368 aa28.35■■■□□ 2.13
SNHG6-203ENST00000520944 INSRP06213 1382 aa28.34■■■□□ 2.13
SNHG6-203ENST00000520944 USHBP1Q8N6Y0 703 aa28.33■■■□□ 2.13
SNHG6-203ENST00000520944 PPM1GO15355 546 aaPredicted RBP28.32■■■□□ 2.12
SNHG6-203ENST00000520944 SYTL4Q96C24 671 aaPredicted RBP28.31■■■□□ 2.12
SNHG6-203ENST00000520944 PPP1R1BQ9UD71 204 aaPredicted RBP28.31■■■□□ 2.12
SNHG6-203ENST00000520944 TATP17735 454 aaPredicted RBP28.3■■■□□ 2.12
SNHG6-203ENST00000520944 SLC15A2Q16348 729 aa28.3■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms