RNA–Protein interactions for RNA: ENST00000520880.1

CTHRC1-204, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 4 BASIC

Gene CTHRC1, Length 560 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-204ENST00000520880 CCDC116Q8IYX3 515 aa10.2□□□□□ -0.78
CTHRC1-204ENST00000520880 PTK2Q05397 1052 aa10.19□□□□□ -0.78
CTHRC1-204ENST00000520880 MEIOBQ8N635 442 aa10.19□□□□□ -0.78
CTHRC1-204ENST00000520880 ADAM32Q8TC27 787 aa10.19□□□□□ -0.78
CTHRC1-204ENST00000520880 SLC10A4Q96EP9 437 aa10.19□□□□□ -0.78
CTHRC1-204ENST00000520880 TRIM34Q9BYJ4 488 aa10.19□□□□□ -0.78
CTHRC1-204ENST00000520880 TMEM259Q4ZIN3 620 aa10.18□□□□□ -0.78
CTHRC1-204ENST00000520880 C6orf118Q5T5N4 469 aa10.18□□□□□ -0.78
CTHRC1-204ENST00000520880 KCTD15Q96SI1 283 aaPredicted RBP10.18□□□□□ -0.78
CTHRC1-204ENST00000520880 NXF1Q9UBU9 619 aaKnown RBP10.18□□□□□ -0.78
CTHRC1-204ENST00000520880 GPSM3Q9Y4H4 160 aa10.18□□□□□ -0.78
CTHRC1-204ENST00000520880 EMILIN1Q9Y6C2 1016 aa10.18□□□□□ -0.78
CTHRC1-204ENST00000520880 SOBPA7XYQ1 873 aa10.17□□□□□ -0.78
CTHRC1-204ENST00000520880 PPP1R26Q5T8A7 1209 aaPredicted RBP10.17□□□□□ -0.78
CTHRC1-204ENST00000520880 LINC00528Q8N1L1 170 aa10.16□□□□□ -0.78
CTHRC1-204ENST00000520880 CDV3Q9UKY7 258 aaKnown RBP10.16□□□□□ -0.78
CTHRC1-204ENST00000520880 PNMA1Q8ND90 353 aa10.15□□□□□ -0.78
CTHRC1-204ENST00000520880 BMP2P12643 396 aa10.14□□□□□ -0.79
CTHRC1-204ENST00000520880 VEGFBP49765 207 aa10.14□□□□□ -0.79
CTHRC1-204ENST00000520880 INTS6LQ5JSJ4 861 aaKnown RBP10.14□□□□□ -0.79
CTHRC1-204ENST00000520880 GJD4Q96KN9 370 aaPredicted RBP10.14□□□□□ -0.79
CTHRC1-204ENST00000520880 WIPF1O43516 503 aa10.13□□□□□ -0.79
CTHRC1-204ENST00000520880 UPP2O95045 317 aa10.13□□□□□ -0.79
CTHRC1-204ENST00000520880 CBLBQ13191 982 aa10.13□□□□□ -0.79
CTHRC1-204ENST00000520880 PGPEP1Q9NXJ5 209 aa10.12□□□□□ -0.79
CTHRC1-204ENST00000520880 NPAS3Q8IXF0 933 aa10.11□□□□□ -0.79
CTHRC1-204ENST00000520880 SLC16A10Q8TF71 515 aa10.11□□□□□ -0.79
CTHRC1-204ENST00000520880 TSEN34Q9BSV6 310 aaKnown RBP10.11□□□□□ -0.79
CTHRC1-204ENST00000520880 H3BM21 787 aa10.1□□□□□ -0.79
CTHRC1-204ENST00000520880 MAN1A2O60476 641 aa10.1□□□□□ -0.79
CTHRC1-204ENST00000520880 Q6ZVU0 165 aa10.1□□□□□ -0.79
CTHRC1-204ENST00000520880 SOS2Q07890 1332 aaPredicted RBP10.09□□□□□ -0.79
CTHRC1-204ENST00000520880 DHX9Q08211 1270 aaKnown RBP10.09□□□□□ -0.79
CTHRC1-204ENST00000520880 NBPF20Q3BBV1 942 aa10.09□□□□□ -0.79
CTHRC1-204ENST00000520880 DZIP3Q86Y13 1208 aaKnown RBP10.09□□□□□ -0.79
CTHRC1-204ENST00000520880 RAB15P59190 212 aa10.08□□□□□ -0.8
CTHRC1-204ENST00000520880 TMPRSS4Q9NRS4 437 aa10.08□□□□□ -0.8
CTHRC1-204ENST00000520880 DNMT3LQ9UJW3 386 aa10.08□□□□□ -0.8
CTHRC1-204ENST00000520880 ERBB4Q15303 1308 aa10.07□□□□□ -0.8
CTHRC1-204ENST00000520880 ESPNB1AK53 854 aa10.06□□□□□ -0.8
CTHRC1-204ENST00000520880 FBXO45P0C2W1 286 aa10.06□□□□□ -0.8
CTHRC1-204ENST00000520880 BANK1Q8NDB2 785 aa10.06□□□□□ -0.8
CTHRC1-204ENST00000520880 IRF7Q92985 503 aa10.06□□□□□ -0.8
CTHRC1-204ENST00000520880 ZBBXA8MT70 800 aa10.05□□□□□ -0.8
CTHRC1-204ENST00000520880 ERVH48-1M5A8F1 160 aa10.05□□□□□ -0.8
CTHRC1-204ENST00000520880 GMPRP36959 345 aa10.05□□□□□ -0.8
CTHRC1-204ENST00000520880 ZNF784Q8NCA9 323 aaPredicted RBP10.05□□□□□ -0.8
CTHRC1-204ENST00000520880 MTMR14Q8NCE2 650 aa10.05□□□□□ -0.8
CTHRC1-204ENST00000520880 AGBL1Q96MI9 1066 aa10.05□□□□□ -0.8
CTHRC1-204ENST00000520880 TTLL8A6PVC2 850 aa10.04□□□□□ -0.8
CTHRC1-204ENST00000520880 SPINT1O43278 529 aa10.04□□□□□ -0.8
CTHRC1-204ENST00000520880 GPR37L1O60883 481 aa10.04□□□□□ -0.8
CTHRC1-204ENST00000520880 RELBQ01201 579 aa10.03□□□□□ -0.8
CTHRC1-204ENST00000520880 SNRKQ9NRH2 765 aa10.03□□□□□ -0.8
CTHRC1-204ENST00000520880 LILRA1O75019 489 aa10.02□□□□□ -0.81
CTHRC1-204ENST00000520880 INSM1Q01101 510 aaPredicted RBP10.02□□□□□ -0.81
CTHRC1-204ENST00000520880 PCDHB9Q9Y5E1 797 aa10.02□□□□□ -0.81
CTHRC1-204ENST00000520880 FIGNL2A6NMB9 653 aa10.01□□□□□ -0.81
CTHRC1-204ENST00000520880 SOCS7O14512 581 aa10.01□□□□□ -0.81
CTHRC1-204ENST00000520880 GIGYF1O75420 1035 aaPredicted RBP10.01□□□□□ -0.81
CTHRC1-204ENST00000520880 ADD1P35611 737 aaKnown RBP10.01□□□□□ -0.81
CTHRC1-204ENST00000520880 PPFIA3O75145 1194 aa10□□□□□ -0.81
CTHRC1-204ENST00000520880 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10□□□□□ -0.81
CTHRC1-204ENST00000520880 SEPT12Q8IYM1 358 aa10□□□□□ -0.81
CTHRC1-204ENST00000520880 ADH1AP07327 375 aa9.99□□□□□ -0.81
CTHRC1-204ENST00000520880 VSIG8P0DPA2 414 aa9.99□□□□□ -0.81
CTHRC1-204ENST00000520880 PRKCSHP14314 528 aaPredicted RBP9.99□□□□□ -0.81
CTHRC1-204ENST00000520880 CTSOP43234 321 aaPredicted RBP9.99□□□□□ -0.81
CTHRC1-204ENST00000520880 KDF1Q8NAX2 398 aaPredicted RBP9.99□□□□□ -0.81
CTHRC1-204ENST00000520880 INSM2Q96T92 566 aaPredicted RBP9.99□□□□□ -0.81
CTHRC1-204ENST00000520880 ZNF395Q9H8N7 513 aaPredicted RBP9.99□□□□□ -0.81
CTHRC1-204ENST00000520880 NDUFB9Q9Y6M9 179 aa9.99□□□□□ -0.81
CTHRC1-204ENST00000520880 NR1H3Q13133 447 aa9.98□□□□□ -0.81
CTHRC1-204ENST00000520880 CYLDQ9NQC7 956 aa9.98□□□□□ -0.81
CTHRC1-204ENST00000520880 PTSQ03393 145 aa9.97□□□□□ -0.81
CTHRC1-204ENST00000520880 STK17AQ9UEE5 414 aa9.97□□□□□ -0.81
CTHRC1-204ENST00000520880 LORP23490 312 aaPredicted RBP9.96□□□□□ -0.82
CTHRC1-204ENST00000520880 POLMQ9NP87 494 aaPredicted RBP9.95□□□□□ -0.82
CTHRC1-204ENST00000520880 PTGIRP43119 386 aa9.94□□□□□ -0.82
CTHRC1-204ENST00000520880 RNF217Q8TC41 542 aa9.94□□□□□ -0.82
CTHRC1-204ENST00000520880 APBB1O00213 710 aa9.93□□□□□ -0.82
CTHRC1-204ENST00000520880 FOXD4L5Q5VV16 416 aaPredicted RBP9.92□□□□□ -0.82
CTHRC1-204ENST00000520880 CCDC155Q8N6L0 562 aa9.92□□□□□ -0.82
CTHRC1-204ENST00000520880 TBC1D2BQ9UPU7 963 aa9.92□□□□□ -0.82
CTHRC1-204ENST00000520880 MCCD1P59942 119 aaPredicted RBP9.91□□□□□ -0.82
CTHRC1-204ENST00000520880 SLC35F4A4IF30 521 aa9.9□□□□□ -0.82
CTHRC1-204ENST00000520880 ERVK-9P63128 1117 aa9.9□□□□□ -0.82
CTHRC1-204ENST00000520880 RNF20Q5VTR2 975 aa9.9□□□□□ -0.82
CTHRC1-204ENST00000520880 ZSCAN1Q8NBB4 408 aa9.9□□□□□ -0.82
CTHRC1-204ENST00000520880 ZNF330Q9Y3S2 320 aaPredicted RBP9.9□□□□□ -0.82
CTHRC1-204ENST00000520880 SCTRP47872 440 aa9.89□□□□□ -0.83
CTHRC1-204ENST00000520880 CCDC125Q86Z20 511 aa9.89□□□□□ -0.83
CTHRC1-204ENST00000520880 GPR161Q8N6U8 529 aaKnown RBP9.89□□□□□ -0.83
CTHRC1-204ENST00000520880 SENP3-EIF4A1A0A087X0R7 540 aa9.88□□□□□ -0.83
CTHRC1-204ENST00000520880 ATP5J2-PTCD1G3V325 749 aa9.88□□□□□ -0.83
CTHRC1-204ENST00000520880 CC2D2BQ6DHV5 1058 aa9.88□□□□□ -0.83
CTHRC1-204ENST00000520880 ZNF592Q92610 1267 aa9.88□□□□□ -0.83
CTHRC1-204ENST00000520880 PCDHB11Q9Y5F2 797 aa9.88□□□□□ -0.83
CTHRC1-204ENST00000520880 IRF5Q13568 498 aa9.87□□□□□ -0.83
CTHRC1-204ENST00000520880 TRIM52Q96A61 297 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms