RNA–Protein interactions for RNA: ENST00000520513.1

LINC00535-204, long intergenic non-protein coding RNA 535, humanhuman

TSL 3 BASIC

Gene LINC00535, Length 305 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00535-204ENST00000520513 PURBQ96QR8 312 aaKnown RBP10.84□□□□□ -0.67
LINC00535-204ENST00000520513 GPR37L1O60883 481 aa10.83□□□□□ -0.68
LINC00535-204ENST00000520513 TMEM132AQ24JP5 1023 aa10.83□□□□□ -0.68
LINC00535-204ENST00000520513 SOBPA7XYQ1 873 aa10.82□□□□□ -0.68
LINC00535-204ENST00000520513 WFS1O76024 890 aa10.82□□□□□ -0.68
LINC00535-204ENST00000520513 ZBTB33Q86T24 672 aa10.82□□□□□ -0.68
LINC00535-204ENST00000520513 CCDC116Q8IYX3 515 aa10.81□□□□□ -0.68
LINC00535-204ENST00000520513 KCTD15Q96SI1 283 aaPredicted RBP10.81□□□□□ -0.68
LINC00535-204ENST00000520513 PTK2Q05397 1052 aa10.8□□□□□ -0.68
LINC00535-204ENST00000520513 PPP1R26Q5T8A7 1209 aaPredicted RBP10.8□□□□□ -0.68
LINC00535-204ENST00000520513 MEIOBQ8N635 442 aa10.8□□□□□ -0.68
LINC00535-204ENST00000520513 SLC10A4Q96EP9 437 aa10.8□□□□□ -0.68
LINC00535-204ENST00000520513 GPSM3Q9Y4H4 160 aa10.8□□□□□ -0.68
LINC00535-204ENST00000520513 INTS6LQ5JSJ4 861 aaKnown RBP10.79□□□□□ -0.68
LINC00535-204ENST00000520513 MTMR14Q8NCE2 650 aa10.79□□□□□ -0.68
LINC00535-204ENST00000520513 SNRKQ9NRH2 765 aa10.79□□□□□ -0.68
LINC00535-204ENST00000520513 TERTO14746 1132 aaKnown RBP10.78□□□□□ -0.68
LINC00535-204ENST00000520513 CBLBQ13191 982 aa10.78□□□□□ -0.68
LINC00535-204ENST00000520513 SCARF1Q14162 830 aa10.78□□□□□ -0.68
LINC00535-204ENST00000520513 C6orf118Q5T5N4 469 aa10.78□□□□□ -0.68
LINC00535-204ENST00000520513 LINC00528Q8N1L1 170 aa10.76□□□□□ -0.69
LINC00535-204ENST00000520513 CDV3Q9UKY7 258 aaKnown RBP10.76□□□□□ -0.69
LINC00535-204ENST00000520513 EMILIN1Q9Y6C2 1016 aa10.76□□□□□ -0.69
LINC00535-204ENST00000520513 FBXO45P0C2W1 286 aa10.75□□□□□ -0.69
LINC00535-204ENST00000520513 VEGFBP49765 207 aa10.75□□□□□ -0.69
LINC00535-204ENST00000520513 PNMA1Q8ND90 353 aa10.75□□□□□ -0.69
LINC00535-204ENST00000520513 TMPRSS4Q9NRS4 437 aa10.74□□□□□ -0.69
LINC00535-204ENST00000520513 NXF1Q9UBU9 619 aaKnown RBP10.74□□□□□ -0.69
LINC00535-204ENST00000520513 Q6ZVU0 165 aa10.73□□□□□ -0.69
LINC00535-204ENST00000520513 NPAS3Q8IXF0 933 aa10.73□□□□□ -0.69
LINC00535-204ENST00000520513 BANK1Q8NDB2 785 aa10.73□□□□□ -0.69
LINC00535-204ENST00000520513 ESPNB1AK53 854 aa10.72□□□□□ -0.69
LINC00535-204ENST00000520513 WIPF1O43516 503 aa10.72□□□□□ -0.69
LINC00535-204ENST00000520513 BMP2P12643 396 aa10.71□□□□□ -0.69
LINC00535-204ENST00000520513 RAB15P59190 212 aa10.71□□□□□ -0.69
LINC00535-204ENST00000520513 SOS2Q07890 1332 aaPredicted RBP10.7□□□□□ -0.7
LINC00535-204ENST00000520513 ZBBXA8MT70 800 aa10.7□□□□□ -0.7
LINC00535-204ENST00000520513 UPP2O95045 317 aa10.7□□□□□ -0.7
LINC00535-204ENST00000520513 DZIP3Q86Y13 1208 aaKnown RBP10.7□□□□□ -0.7
LINC00535-204ENST00000520513 SLC16A10Q8TF71 515 aa10.7□□□□□ -0.7
LINC00535-204ENST00000520513 AGBL1Q96MI9 1066 aa10.7□□□□□ -0.7
LINC00535-204ENST00000520513 DNMT3LQ9UJW3 386 aa10.7□□□□□ -0.7
LINC00535-204ENST00000520513 ERVH48-1M5A8F1 160 aa10.69□□□□□ -0.7
LINC00535-204ENST00000520513 LILRA1O75019 489 aa10.69□□□□□ -0.7
LINC00535-204ENST00000520513 KDF1Q8NAX2 398 aaPredicted RBP10.69□□□□□ -0.7
LINC00535-204ENST00000520513 ZNF784Q8NCA9 323 aaPredicted RBP10.69□□□□□ -0.7
LINC00535-204ENST00000520513 ERBB4Q15303 1308 aa10.68□□□□□ -0.7
LINC00535-204ENST00000520513 ADD1P35611 737 aaKnown RBP10.68□□□□□ -0.7
LINC00535-204ENST00000520513 PGPEP1Q9NXJ5 209 aa10.68□□□□□ -0.7
LINC00535-204ENST00000520513 H3BM21 787 aa10.67□□□□□ -0.7
LINC00535-204ENST00000520513 SOCS7O14512 581 aa10.67□□□□□ -0.7
LINC00535-204ENST00000520513 GIGYF1O75420 1035 aaPredicted RBP10.67□□□□□ -0.7
LINC00535-204ENST00000520513 DHX9Q08211 1270 aaKnown RBP10.67□□□□□ -0.7
LINC00535-204ENST00000520513 NBPF20Q3BBV1 942 aa10.67□□□□□ -0.7
LINC00535-204ENST00000520513 TSEN34Q9BSV6 310 aaKnown RBP10.67□□□□□ -0.7
LINC00535-204ENST00000520513 PCDHB9Q9Y5E1 797 aa10.66□□□□□ -0.7
LINC00535-204ENST00000520513 SPINT1O43278 529 aa10.65□□□□□ -0.7
LINC00535-204ENST00000520513 MAN1A2O60476 641 aa10.65□□□□□ -0.7
LINC00535-204ENST00000520513 INSM1Q01101 510 aaPredicted RBP10.64□□□□□ -0.71
LINC00535-204ENST00000520513 RELBQ01201 579 aa10.64□□□□□ -0.71
LINC00535-204ENST00000520513 ERICH6Q7L0X2 663 aa10.64□□□□□ -0.71
LINC00535-204ENST00000520513 IRF7Q92985 503 aa10.64□□□□□ -0.71
LINC00535-204ENST00000520513 TBC1D2BQ9UPU7 963 aa10.64□□□□□ -0.71
LINC00535-204ENST00000520513 GTF3C3Q9Y5Q9 886 aa10.64□□□□□ -0.71
LINC00535-204ENST00000520513 NDUFB9Q9Y6M9 179 aa10.64□□□□□ -0.71
LINC00535-204ENST00000520513 NR1H3Q13133 447 aa10.63□□□□□ -0.71
LINC00535-204ENST00000520513 FIGNL2A6NMB9 653 aa10.62□□□□□ -0.71
LINC00535-204ENST00000520513 GMPRP36959 345 aa10.62□□□□□ -0.71
LINC00535-204ENST00000520513 CTSOP43234 321 aaPredicted RBP10.62□□□□□ -0.71
LINC00535-204ENST00000520513 ZNF395Q9H8N7 513 aaPredicted RBP10.62□□□□□ -0.71
LINC00535-204ENST00000520513 CYLDQ9NQC7 956 aa10.62□□□□□ -0.71
LINC00535-204ENST00000520513 TTLL8A6PVC2 850 aa10.61□□□□□ -0.71
LINC00535-204ENST00000520513 INSM2Q96T92 566 aaPredicted RBP10.61□□□□□ -0.71
LINC00535-204ENST00000520513 IRF5Q13568 498 aa10.6□□□□□ -0.71
LINC00535-204ENST00000520513 ADH1AP07327 375 aa10.59□□□□□ -0.71
LINC00535-204ENST00000520513 LORP23490 312 aaPredicted RBP10.59□□□□□ -0.71
LINC00535-204ENST00000520513 SEPT12Q8IYM1 358 aa10.59□□□□□ -0.71
LINC00535-204ENST00000520513 PPFIA3O75145 1194 aa10.58□□□□□ -0.72
LINC00535-204ENST00000520513 SCTRP47872 440 aa10.57□□□□□ -0.72
LINC00535-204ENST00000520513 FOXD4L5Q5VV16 416 aaPredicted RBP10.57□□□□□ -0.72
LINC00535-204ENST00000520513 STK17AQ9UEE5 414 aa10.57□□□□□ -0.72
LINC00535-204ENST00000520513 VSIG8P0DPA2 414 aa10.56□□□□□ -0.72
LINC00535-204ENST00000520513 PTGIRP43119 386 aa10.56□□□□□ -0.72
LINC00535-204ENST00000520513 PTSQ03393 145 aa10.56□□□□□ -0.72
LINC00535-204ENST00000520513 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.55□□□□□ -0.72
LINC00535-204ENST00000520513 RNF217Q8TC41 542 aa10.55□□□□□ -0.72
LINC00535-204ENST00000520513 TRIM52Q96A61 297 aa10.54□□□□□ -0.72
LINC00535-204ENST00000520513 ERVK-9P63128 1117 aa10.53□□□□□ -0.72
LINC00535-204ENST00000520513 GDPD2Q9HCC8 539 aa10.53□□□□□ -0.72
LINC00535-204ENST00000520513 POLMQ9NP87 494 aaPredicted RBP10.53□□□□□ -0.72
LINC00535-204ENST00000520513 SENP3-EIF4A1A0A087X0R7 540 aa10.52□□□□□ -0.73
LINC00535-204ENST00000520513 APBB1O00213 710 aa10.52□□□□□ -0.73
LINC00535-204ENST00000520513 MCM6Q14566 821 aa10.52□□□□□ -0.73
LINC00535-204ENST00000520513 TSGA10IPQ3SY00 556 aa10.52□□□□□ -0.73
LINC00535-204ENST00000520513 CCDC85AQ96PX6 553 aaPredicted RBP10.52□□□□□ -0.73
LINC00535-204ENST00000520513 GPR161Q8N6U8 529 aaKnown RBP10.51□□□□□ -0.73
LINC00535-204ENST00000520513 CDCA7Q9BWT1 371 aaPredicted RBP10.51□□□□□ -0.73
LINC00535-204ENST00000520513 CEP126Q9P2H0 1117 aa10.51□□□□□ -0.73
LINC00535-204ENST00000520513 SLC35F4A4IF30 521 aa10.5□□□□□ -0.73
LINC00535-204ENST00000520513 CCDC125Q86Z20 511 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms