RNA–Protein interactions for RNA: ENST00000520451.1

CSMD1-207, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-207ENST00000520451 NFAT5O94916 1531 aa21.52■■□□□ 1.04
CSMD1-207ENST00000520451 DDB1Q16531 1140 aa21.52■■□□□ 1.04
CSMD1-207ENST00000520451 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.52■■□□□ 1.04
CSMD1-207ENST00000520451 TMC1Q8TDI8 760 aa21.52■■□□□ 1.04
CSMD1-207ENST00000520451 OVOS2A0A0G2JMS6 1433 aa21.52■■□□□ 1.04
CSMD1-207ENST00000520451 OVOS2A0A0J9YW53 1432 aa21.52■■□□□ 1.04
CSMD1-207ENST00000520451 OVOS2Q6IE36 1432 aa21.52■■□□□ 1.04
CSMD1-207ENST00000520451 MON2Q7Z3U7 1717 aa21.52■■□□□ 1.03
CSMD1-207ENST00000520451 LRRC37A3O60309 1634 aa21.51■■□□□ 1.03
CSMD1-207ENST00000520451 C11orf95C9JLR9 678 aaPredicted RBP21.51■■□□□ 1.03
CSMD1-207ENST00000520451 CSB-PGBD3P0DP91 1061 aa21.51■■□□□ 1.03
CSMD1-207ENST00000520451 CD163L1Q9NR16 1453 aa21.5■■□□□ 1.03
CSMD1-207ENST00000520451 RREB1Q92766 1687 aa21.48■■□□□ 1.03
CSMD1-207ENST00000520451 HDGFL2Q7Z4V5 671 aaPredicted RBP21.48■■□□□ 1.03
CSMD1-207ENST00000520451 NME9Q86XW9 330 aa21.48■■□□□ 1.03
CSMD1-207ENST00000520451 CDCA7Q9BWT1 371 aaPredicted RBP21.48■■□□□ 1.03
CSMD1-207ENST00000520451 CARD10Q9BWT7 1032 aa21.48■■□□□ 1.03
CSMD1-207ENST00000520451 SLC12A5Q9H2X9 1139 aa21.48■■□□□ 1.03
CSMD1-207ENST00000520451 PEAK1Q9H792 1746 aa21.48■■□□□ 1.03
CSMD1-207ENST00000520451 USP31Q70CQ4 1352 aa21.48■■□□□ 1.03
CSMD1-207ENST00000520451 RGPD5Q99666 1765 aa21.47■■□□□ 1.03
CSMD1-207ENST00000520451 WNK3Q9BYP7 1800 aa21.47■■□□□ 1.03
CSMD1-207ENST00000520451 ABCC6O95255 1503 aa21.46■■□□□ 1.03
CSMD1-207ENST00000520451 NUP188Q5SRE5 1749 aa21.46■■□□□ 1.03
CSMD1-207ENST00000520451 NBPF14Q5TI25 921 aa21.45■■□□□ 1.02
CSMD1-207ENST00000520451 EDC4Q6P2E9 1401 aaKnown RBP21.45■■□□□ 1.02
CSMD1-207ENST00000520451 MARCH10Q8NA82 808 aaPredicted RBP21.44■■□□□ 1.02
CSMD1-207ENST00000520451 TERF2IPQ9NYB0 399 aa21.44■■□□□ 1.02
CSMD1-207ENST00000520451 USP54Q70EL1 1684 aa21.44■■□□□ 1.02
CSMD1-207ENST00000520451 A0A1W2PP64 1363 aa21.43■■□□□ 1.02
CSMD1-207ENST00000520451 CCDC7Q96M83 1385 aa21.43■■□□□ 1.02
CSMD1-207ENST00000520451 TRIM26Q12899 539 aaPredicted RBP21.42■■□□□ 1.02
CSMD1-207ENST00000520451 PUS7Q96PZ0 661 aaKnown RBP21.42■■□□□ 1.02
CSMD1-207ENST00000520451 BCL11BQ9C0K0 894 aaPredicted RBP21.41■■□□□ 1.02
CSMD1-207ENST00000520451 ST20-MTHFSA0A0A6YYL1 179 aa21.4■■□□□ 1.02
CSMD1-207ENST00000520451 EXOC5O00471 708 aa21.4■■□□□ 1.02
CSMD1-207ENST00000520451 PTF1AQ7RTS3 328 aa21.4■■□□□ 1.02
CSMD1-207ENST00000520451 TESK2Q96S53 571 aa21.4■■□□□ 1.02
CSMD1-207ENST00000520451 SBF2Q86WG5 1849 aa21.4■■□□□ 1.02
CSMD1-207ENST00000520451 BCL9O00512 1426 aa21.39■■□□□ 1.02
CSMD1-207ENST00000520451 ERBB3P21860 1342 aa21.39■■□□□ 1.01
CSMD1-207ENST00000520451 PLSCR1O15162 318 aa21.38■■□□□ 1.01
CSMD1-207ENST00000520451 NLRP2Q9NX02 1062 aa21.38■■□□□ 1.01
CSMD1-207ENST00000520451 TNS2Q63HR2 1409 aa21.38■■□□□ 1.01
CSMD1-207ENST00000520451 NINLQ9Y2I6 1382 aa21.37■■□□□ 1.01
CSMD1-207ENST00000520451 RGPD3A6NKT7 1758 aaPredicted RBP21.37■■□□□ 1.01
CSMD1-207ENST00000520451 LTN1O94822 1766 aa21.37■■□□□ 1.01
CSMD1-207ENST00000520451 RGPD4Q7Z3J3 1758 aa21.37■■□□□ 1.01
CSMD1-207ENST00000520451 ANKRD24Q8TF21 1146 aa21.36■■□□□ 1.01
CSMD1-207ENST00000520451 SLC24A1O60721 1099 aa21.34■■□□□ 1.01
CSMD1-207ENST00000520451 IL2RBP14784 551 aa21.32■■□□□ 1
CSMD1-207ENST00000520451 ANO8Q9HCE9 1232 aaPredicted RBP21.32■■□□□ 1
CSMD1-207ENST00000520451 COG3Q96JB2 828 aa21.31■■□□□ 1
CSMD1-207ENST00000520451 PROM2Q8N271 834 aa21.3■■□□□ 1
CSMD1-207ENST00000520451 IP6K1Q92551 441 aa21.3■■□□□ 1
CSMD1-207ENST00000520451 USP47Q96K76 1375 aa21.3■■□□□ 1
CSMD1-207ENST00000520451 KCNQ2O43526 872 aa21.29■■□□□ 1
CSMD1-207ENST00000520451 SPON1Q9HCB6 807 aa21.29■■□□□ 1
CSMD1-207ENST00000520451 ANKRD36BQ8N2N9 1353 aa21.28■■□□□ 1
CSMD1-207ENST00000520451 TMF1P82094 1093 aa21.28■■□□□ 1
CSMD1-207ENST00000520451 LTV1Q96GA3 475 aaPredicted RBP21.28■■□□□ 1
CSMD1-207ENST00000520451 ACSBG1Q96GR2 724 aa21.28■■□□□ 1
CSMD1-207ENST00000520451 TXNRD1Q16881 649 aa21.27■■□□□ 1
CSMD1-207ENST00000520451 PPP1R1BQ9UD71 204 aaPredicted RBP21.27■■□□□ 1
CSMD1-207ENST00000520451 MAP3K19Q56UN5 1328 aa21.27■□□□□ 0.99
CSMD1-207ENST00000520451 NHSQ6T4R5 1651 aa21.26■□□□□ 0.99
CSMD1-207ENST00000520451 FBLN1P23142 703 aa21.24■□□□□ 0.99
CSMD1-207ENST00000520451 AMPHP49418 695 aa21.24■□□□□ 0.99
CSMD1-207ENST00000520451 STK32BQ9NY57 414 aa21.24■□□□□ 0.99
CSMD1-207ENST00000520451 HOXC9P31274 260 aa21.23■□□□□ 0.99
CSMD1-207ENST00000520451 FAM208AQ9UK61 1670 aaKnown RBP21.23■□□□□ 0.99
CSMD1-207ENST00000520451 PDGFDQ9GZP0 370 aaPredicted RBP21.22■□□□□ 0.99
CSMD1-207ENST00000520451 CASZ1Q86V15 1759 aa21.22■□□□□ 0.99
CSMD1-207ENST00000520451 GGNBP2Q9H3C7 697 aa21.21■□□□□ 0.99
CSMD1-207ENST00000520451 FYB1O15117 783 aa21.2■□□□□ 0.98
CSMD1-207ENST00000520451 CDCA8Q53HL2 280 aa21.2■□□□□ 0.98
CSMD1-207ENST00000520451 DDX54Q8TDD1 881 aaKnown RBP21.2■□□□□ 0.98
CSMD1-207ENST00000520451 ZBTB7AO95365 584 aa21.19■□□□□ 0.98
CSMD1-207ENST00000520451 RRS1Q15050 365 aaKnown RBP21.19■□□□□ 0.98
CSMD1-207ENST00000520451 SLC15A2Q16348 729 aa21.19■□□□□ 0.98
CSMD1-207ENST00000520451 RTL1A6NKG5 1358 aa21.19■□□□□ 0.98
CSMD1-207ENST00000520451 BTAF1O14981 1849 aa21.18■□□□□ 0.98
CSMD1-207ENST00000520451 KAT6BQ8WYB5 2073 aa21.14■□□□□ 0.98
CSMD1-207ENST00000520451 TIMELESSQ9UNS1 1208 aa21.14■□□□□ 0.97
CSMD1-207ENST00000520451 ATF5Q9Y2D1 282 aaPredicted RBP21.14■□□□□ 0.97
CSMD1-207ENST00000520451 MEGF6O75095 1541 aa21.14■□□□□ 0.97
CSMD1-207ENST00000520451 SMG6Q86US8 1419 aaKnown RBP21.13■□□□□ 0.97
CSMD1-207ENST00000520451 RGPD2P0DJD1 1756 aa21.13■□□□□ 0.97
CSMD1-207ENST00000520451 ZCRB1Q8TBF4 217 aaKnown RBP21.13■□□□□ 0.97
CSMD1-207ENST00000520451 PCGF6Q9BYE7 350 aa21.13■□□□□ 0.97
CSMD1-207ENST00000520451 PAPPAQ13219 1627 aa21.12■□□□□ 0.97
CSMD1-207ENST00000520451 PTGER2P43116 358 aa21.12■□□□□ 0.97
CSMD1-207ENST00000520451 NBPF6Q5VWK0 638 aa21.12■□□□□ 0.97
CSMD1-207ENST00000520451 USHBP1Q8N6Y0 703 aa21.12■□□□□ 0.97
CSMD1-207ENST00000520451 SYTL4Q96C24 671 aaPredicted RBP21.12■□□□□ 0.97
CSMD1-207ENST00000520451 NBPF4Q96M43 638 aa21.12■□□□□ 0.97
CSMD1-207ENST00000520451 KIF20BQ96Q89 1820 aa21.12■□□□□ 0.97
CSMD1-207ENST00000520451 LRRC4BQ9NT99 713 aa21.11■□□□□ 0.97
CSMD1-207ENST00000520451 NSD3Q9BZ95 1437 aa21.11■□□□□ 0.97
CSMD1-207ENST00000520451 CLSPNQ9HAW4 1339 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms