RNA–Protein interactions for RNA: ENST00000520339.5

CTNNA1-221, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-221ENST00000520339 CDK19Q9BWU1 502 aa13.43□□□□□ -0.26
CTNNA1-221ENST00000520339 CCDC125Q86Z20 511 aa13.42□□□□□ -0.26
CTNNA1-221ENST00000520339 TULP4Q9NRJ4 1543 aa13.41□□□□□ -0.26
CTNNA1-221ENST00000520339 PPP1R37O75864 691 aa13.41□□□□□ -0.26
CTNNA1-221ENST00000520339 SEPT12Q8IYM1 358 aa13.41□□□□□ -0.26
CTNNA1-221ENST00000520339 FBXO22Q8NEZ5 403 aa13.4□□□□□ -0.26
CTNNA1-221ENST00000520339 USP32Q8NFA0 1604 aa13.39□□□□□ -0.27
CTNNA1-221ENST00000520339 PLEKHG3A1L390 1219 aa13.39□□□□□ -0.27
CTNNA1-221ENST00000520339 NBPF8Q3BBV2 869 aa13.39□□□□□ -0.27
CTNNA1-221ENST00000520339 CCDC9Q9Y3X0 531 aaKnown RBP13.39□□□□□ -0.27
CTNNA1-221ENST00000520339 L3MBTL2Q969R5 705 aa13.38□□□□□ -0.27
CTNNA1-221ENST00000520339 BTG4Q9NY30 223 aa13.38□□□□□ -0.27
CTNNA1-221ENST00000520339 ATP7BP35670 1465 aa13.37□□□□□ -0.27
CTNNA1-221ENST00000520339 ACEP12821 1306 aa13.37□□□□□ -0.27
CTNNA1-221ENST00000520339 GLI3P10071 1580 aa13.37□□□□□ -0.27
CTNNA1-221ENST00000520339 POLR3AO14802 1390 aaPredicted RBP13.36□□□□□ -0.27
CTNNA1-221ENST00000520339 SIN3AQ96ST3 1273 aa13.36□□□□□ -0.27
CTNNA1-221ENST00000520339 GOLGA2Q08379 1002 aa13.35□□□□□ -0.27
CTNNA1-221ENST00000520339 KRT27Q7Z3Y8 459 aa13.35□□□□□ -0.27
CTNNA1-221ENST00000520339 TMEM106CQ9BVX2 250 aa13.35□□□□□ -0.27
CTNNA1-221ENST00000520339 PRDM11Q9NQV5 511 aa13.35□□□□□ -0.27
CTNNA1-221ENST00000520339 CENPJQ9HC77 1338 aaPredicted RBP13.35□□□□□ -0.27
CTNNA1-221ENST00000520339 C19orf67A6NJJ6 358 aa13.34□□□□□ -0.27
CTNNA1-221ENST00000520339 FAM98CQ17RN3 349 aaKnown RBP13.34□□□□□ -0.27
CTNNA1-221ENST00000520339 NUTM2GQ5VZR2 741 aa13.34□□□□□ -0.27
CTNNA1-221ENST00000520339 MS4A3Q96HJ5 214 aa13.34□□□□□ -0.27
CTNNA1-221ENST00000520339 RGPD8O14715 1765 aaPredicted RBP13.34□□□□□ -0.27
CTNNA1-221ENST00000520339 SPATA31A5Q5VU36 1347 aa13.34□□□□□ -0.27
CTNNA1-221ENST00000520339 SPATA31A7Q8IWB4 1347 aa13.34□□□□□ -0.27
CTNNA1-221ENST00000520339 BLMP54132 1417 aaPredicted RBP13.33□□□□□ -0.28
CTNNA1-221ENST00000520339 SRPK2P78362 688 aaKnown RBP13.33□□□□□ -0.28
CTNNA1-221ENST00000520339 KIAA0232Q92628 1395 aa13.32□□□□□ -0.28
CTNNA1-221ENST00000520339 ZC3H6P61129 1189 aaKnown RBP13.32□□□□□ -0.28
CTNNA1-221ENST00000520339 CHRNA2Q15822 529 aa13.32□□□□□ -0.28
CTNNA1-221ENST00000520339 DEFB132Q7Z7B7 95 aa13.32□□□□□ -0.28
CTNNA1-221ENST00000520339 TRPC6Q9Y210 931 aa13.32□□□□□ -0.28
CTNNA1-221ENST00000520339 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.32□□□□□ -0.28
CTNNA1-221ENST00000520339 TRPM3Q9HCF6 1732 aaPredicted RBP13.31□□□□□ -0.28
CTNNA1-221ENST00000520339 MARF1Q9Y4F3 1742 aaKnown RBP13.31□□□□□ -0.28
CTNNA1-221ENST00000520339 NEUROD1Q13562 356 aa13.31□□□□□ -0.28
CTNNA1-221ENST00000520339 ABTB2Q8N961 1025 aa13.31□□□□□ -0.28
CTNNA1-221ENST00000520339 KCNV2Q8TDN2 545 aa13.31□□□□□ -0.28
CTNNA1-221ENST00000520339 A0A0G2JS52 829 aa13.3□□□□□ -0.28
CTNNA1-221ENST00000520339 MYT1Q01538 1121 aa13.3□□□□□ -0.28
CTNNA1-221ENST00000520339 CABP1Q9NZU7 370 aa13.3□□□□□ -0.28
CTNNA1-221ENST00000520339 ALS2Q96Q42 1657 aa13.29□□□□□ -0.28
CTNNA1-221ENST00000520339 SF3B2Q13435 895 aaKnown RBP13.29□□□□□ -0.28
CTNNA1-221ENST00000520339 ARHGEF28Q8N1W1 1705 aaKnown RBP13.29□□□□□ -0.28
CTNNA1-221ENST00000520339 USP19O94966 1318 aa13.29□□□□□ -0.28
CTNNA1-221ENST00000520339 SPATA31A1Q5TZJ5 1347 aa13.29□□□□□ -0.28
CTNNA1-221ENST00000520339 GCP02774 474 aa13.28□□□□□ -0.28
CTNNA1-221ENST00000520339 NLRP13Q86W25 1043 aa13.28□□□□□ -0.28
CTNNA1-221ENST00000520339 STRN4Q9NRL3 753 aa13.28□□□□□ -0.28
CTNNA1-221ENST00000520339 PPIP5K1Q6PFW1 1433 aa13.28□□□□□ -0.28
CTNNA1-221ENST00000520339 MS4A4AQ96JQ5 239 aa13.27□□□□□ -0.29
CTNNA1-221ENST00000520339 BRD4O60885 1362 aaPredicted RBP13.27□□□□□ -0.29
CTNNA1-221ENST00000520339 CPDO75976 1380 aa13.27□□□□□ -0.29
CTNNA1-221ENST00000520339 NWD2Q9ULI1 1742 aa13.27□□□□□ -0.29
CTNNA1-221ENST00000520339 KIAA1210Q9ULL0 1709 aa13.27□□□□□ -0.29
CTNNA1-221ENST00000520339 EVA1CP58658 441 aa13.26□□□□□ -0.29
CTNNA1-221ENST00000520339 MKRN3Q13064 507 aaKnown RBP13.26□□□□□ -0.29
CTNNA1-221ENST00000520339 EVC2Q86UK5 1308 aa13.26□□□□□ -0.29
CTNNA1-221ENST00000520339 ABCA3Q99758 1704 aa13.25□□□□□ -0.29
CTNNA1-221ENST00000520339 FAM182BQ5T319 152 aa13.25□□□□□ -0.29
CTNNA1-221ENST00000520339 LARP1Q6PKG0 1096 aaKnown RBP13.25□□□□□ -0.29
CTNNA1-221ENST00000520339 BARGINQ6ZT62 677 aa13.25□□□□□ -0.29
CTNNA1-221ENST00000520339 COL14A1Q05707 1796 aaKnown RBP13.25□□□□□ -0.29
CTNNA1-221ENST00000520339 PLCH1Q4KWH8 1693 aa13.24□□□□□ -0.29
CTNNA1-221ENST00000520339 ROCK2O75116 1388 aaKnown RBP13.24□□□□□ -0.29
CTNNA1-221ENST00000520339 USP6P35125 1406 aa13.23□□□□□ -0.29
CTNNA1-221ENST00000520339 SSH2Q76I76 1423 aa13.23□□□□□ -0.29
CTNNA1-221ENST00000520339 BAG6P46379 1132 aa13.23□□□□□ -0.29
CTNNA1-221ENST00000520339 USP35Q9P2H5 1018 aa13.23□□□□□ -0.29
CTNNA1-221ENST00000520339 EP400Q96L91 3159 aa13.22□□□□□ -0.29
CTNNA1-221ENST00000520339 NRAPQ86VF7 1730 aa13.22□□□□□ -0.29
CTNNA1-221ENST00000520339 TCP11L2Q8N4U5 519 aa13.22□□□□□ -0.29
CTNNA1-221ENST00000520339 EN1Q05925 392 aaPredicted RBP13.21□□□□□ -0.29
CTNNA1-221ENST00000520339 FAM196AQ6ZSG2 479 aa13.21□□□□□ -0.29
CTNNA1-221ENST00000520339 THRAP3Q9Y2W1 955 aaKnown RBP13.21□□□□□ -0.29
CTNNA1-221ENST00000520339 CAMTA1Q9Y6Y1 1673 aa13.21□□□□□ -0.3
CTNNA1-221ENST00000520339 TTC21BQ7Z4L5 1316 aa13.2□□□□□ -0.3
CTNNA1-221ENST00000520339 TIE1P35590 1138 aa13.2□□□□□ -0.3
CTNNA1-221ENST00000520339 E2F4Q16254 413 aa13.2□□□□□ -0.3
CTNNA1-221ENST00000520339 TOPAZ1Q8N9V7 1692 aa13.2□□□□□ -0.3
CTNNA1-221ENST00000520339 AATKQ6ZMQ8 1374 aa13.2□□□□□ -0.3
CTNNA1-221ENST00000520339 CRYBG1Q9Y4K1 1723 aa13.19□□□□□ -0.3
CTNNA1-221ENST00000520339 TTLL13PA6NNM8 815 aa13.19□□□□□ -0.3
CTNNA1-221ENST00000520339 PDE3BQ13370 1112 aa13.19□□□□□ -0.3
CTNNA1-221ENST00000520339 CARD11Q9BXL7 1154 aa13.19□□□□□ -0.3
CTNNA1-221ENST00000520339 ITSN1Q15811 1721 aa13.19□□□□□ -0.3
CTNNA1-221ENST00000520339 TRIM37O94972 964 aa13.18□□□□□ -0.3
CTNNA1-221ENST00000520339 POTEHQ6S545 545 aa13.18□□□□□ -0.3
CTNNA1-221ENST00000520339 LARP6Q9BRS8 491 aaKnown RBP13.18□□□□□ -0.3
CTNNA1-221ENST00000520339 SRCAPQ6ZRS2 3230 aa13.18□□□□□ -0.3
CTNNA1-221ENST00000520339 BRWD3Q6RI45 1802 aa13.18□□□□□ -0.3
CTNNA1-221ENST00000520339 DISP2A7MBM2 1401 aa13.17□□□□□ -0.3
CTNNA1-221ENST00000520339 ZBTB7CA1YPR0 619 aa13.17□□□□□ -0.3
CTNNA1-221ENST00000520339 PDE4AP27815 886 aa13.17□□□□□ -0.3
CTNNA1-221ENST00000520339 ARHGEF25Q86VW2 580 aa13.17□□□□□ -0.3
CTNNA1-221ENST00000520339 CAMKK2Q96RR4 588 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms