RNA–Protein interactions for RNA: ENST00000520170.1

HDAC2-207, Transcript of histone deacetylase 2, humanhuman

TSL 2

Gene HDAC2, Length 690 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-207ENST00000520170 OVOS2Q6IE36 1432 aa28.67■■■□□ 2.18
HDAC2-207ENST00000520170 PEAK1Q9H792 1746 aa28.66■■■□□ 2.18
HDAC2-207ENST00000520170 LRRC37A3O60309 1634 aa28.66■■■□□ 2.18
HDAC2-207ENST00000520170 WDR17Q8IZU2 1322 aa28.65■■■□□ 2.18
HDAC2-207ENST00000520170 ARHGEF25Q86VW2 580 aa28.64■■■□□ 2.18
HDAC2-207ENST00000520170 KCNH5Q8NCM2 988 aa28.64■■■□□ 2.18
HDAC2-207ENST00000520170 CPSF1Q10570 1443 aaKnown RBP28.63■■■□□ 2.17
HDAC2-207ENST00000520170 WNK3Q9BYP7 1800 aa28.63■■■□□ 2.17
HDAC2-207ENST00000520170 CSB-PGBD3P0DP91 1061 aa28.61■■■□□ 2.17
HDAC2-207ENST00000520170 TTC21AQ8NDW8 1320 aa28.61■■■□□ 2.17
HDAC2-207ENST00000520170 KTN1Q86UP2 1357 aaKnown RBP28.6■■■□□ 2.17
HDAC2-207ENST00000520170 PTF1AQ7RTS3 328 aa28.58■■■□□ 2.17
HDAC2-207ENST00000520170 CDCA7Q9BWT1 371 aaPredicted RBP28.58■■■□□ 2.17
HDAC2-207ENST00000520170 PLSCR1O15162 318 aa28.57■■■□□ 2.16
HDAC2-207ENST00000520170 MARCH10Q8NA82 808 aaPredicted RBP28.57■■■□□ 2.16
HDAC2-207ENST00000520170 BCL11BQ9C0K0 894 aaPredicted RBP28.57■■■□□ 2.16
HDAC2-207ENST00000520170 RGPD3A6NKT7 1758 aaPredicted RBP28.56■■■□□ 2.16
HDAC2-207ENST00000520170 RGPD4Q7Z3J3 1758 aa28.56■■■□□ 2.16
HDAC2-207ENST00000520170 CARD10Q9BWT7 1032 aa28.56■■■□□ 2.16
HDAC2-207ENST00000520170 SPON1Q9HCB6 807 aa28.55■■■□□ 2.16
HDAC2-207ENST00000520170 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.54■■■□□ 2.16
HDAC2-207ENST00000520170 PPP1R1BQ9UD71 204 aaPredicted RBP28.54■■■□□ 2.16
HDAC2-207ENST00000520170 MON2Q7Z3U7 1717 aa28.54■■■□□ 2.16
HDAC2-207ENST00000520170 NFAT5O94916 1531 aa28.53■■■□□ 2.16
HDAC2-207ENST00000520170 KCNQ2O43526 872 aa28.53■■■□□ 2.16
HDAC2-207ENST00000520170 EXOC5O00471 708 aa28.5■■■□□ 2.15
HDAC2-207ENST00000520170 CARD11Q9BXL7 1154 aa28.49■■■□□ 2.15
HDAC2-207ENST00000520170 ANO8Q9HCE9 1232 aaPredicted RBP28.49■■■□□ 2.15
HDAC2-207ENST00000520170 TMC1Q8TDI8 760 aa28.48■■■□□ 2.15
HDAC2-207ENST00000520170 BCL9O00512 1426 aa28.47■■■□□ 2.15
HDAC2-207ENST00000520170 NME9Q86XW9 330 aa28.47■■■□□ 2.15
HDAC2-207ENST00000520170 PROM2Q8N271 834 aa28.47■■■□□ 2.15
HDAC2-207ENST00000520170 KAT6BQ8WYB5 2073 aa28.47■■■□□ 2.15
HDAC2-207ENST00000520170 CCDC7Q96M83 1385 aa28.47■■■□□ 2.15
HDAC2-207ENST00000520170 SBNO2Q9Y2G9 1366 aa28.46■■■□□ 2.15
HDAC2-207ENST00000520170 LTN1O94822 1766 aa28.45■■■□□ 2.15
HDAC2-207ENST00000520170 ABCC6O95255 1503 aa28.44■■■□□ 2.14
HDAC2-207ENST00000520170 USP31Q70CQ4 1352 aa28.44■■■□□ 2.14
HDAC2-207ENST00000520170 CD163L1Q9NR16 1453 aa28.43■■■□□ 2.14
HDAC2-207ENST00000520170 SLC12A5Q9H2X9 1139 aa28.43■■■□□ 2.14
HDAC2-207ENST00000520170 NLRP2Q9NX02 1062 aa28.43■■■□□ 2.14
HDAC2-207ENST00000520170 CASZ1Q86V15 1759 aa28.42■■■□□ 2.14
HDAC2-207ENST00000520170 TXNRD1Q16881 649 aa28.42■■■□□ 2.14
HDAC2-207ENST00000520170 HDGFL2Q7Z4V5 671 aaPredicted RBP28.42■■■□□ 2.14
HDAC2-207ENST00000520170 PDGFDQ9GZP0 370 aaPredicted RBP28.42■■■□□ 2.14
HDAC2-207ENST00000520170 USP54Q70EL1 1684 aa28.42■■■□□ 2.14
HDAC2-207ENST00000520170 TNS2Q63HR2 1409 aa28.41■■■□□ 2.14
HDAC2-207ENST00000520170 ERBB3P21860 1342 aa28.39■■■□□ 2.13
HDAC2-207ENST00000520170 ZBTB7AO95365 584 aa28.38■■■□□ 2.13
HDAC2-207ENST00000520170 YY1P25490 414 aa28.38■■■□□ 2.13
HDAC2-207ENST00000520170 NINLQ9Y2I6 1382 aa28.37■■■□□ 2.13
HDAC2-207ENST00000520170 DCAF8L1A6NGE4 600 aa28.37■■■□□ 2.13
HDAC2-207ENST00000520170 ACSBG1Q96GR2 724 aa28.37■■■□□ 2.13
HDAC2-207ENST00000520170 STK32BQ9NY57 414 aa28.37■■■□□ 2.13
HDAC2-207ENST00000520170 ANKRD24Q8TF21 1146 aa28.36■■■□□ 2.13
HDAC2-207ENST00000520170 TERF2IPQ9NYB0 399 aa28.36■■■□□ 2.13
HDAC2-207ENST00000520170 TONSLQ96HA7 1378 aa28.36■■■□□ 2.13
HDAC2-207ENST00000520170 EDC4Q6P2E9 1401 aaKnown RBP28.35■■■□□ 2.13
HDAC2-207ENST00000520170 IL2RBP14784 551 aa28.35■■■□□ 2.13
HDAC2-207ENST00000520170 NHSQ6T4R5 1651 aa28.35■■■□□ 2.13
HDAC2-207ENST00000520170 ATF5Q9Y2D1 282 aaPredicted RBP28.34■■■□□ 2.13
HDAC2-207ENST00000520170 SLC15A2Q16348 729 aa28.33■■■□□ 2.13
HDAC2-207ENST00000520170 A0A1W2PP64 1363 aa28.33■■■□□ 2.13
HDAC2-207ENST00000520170 BTAF1O14981 1849 aa28.29■■■□□ 2.12
HDAC2-207ENST00000520170 MYOM1P52179 1685 aa28.29■■■□□ 2.12
HDAC2-207ENST00000520170 PTGER2P43116 358 aa28.28■■■□□ 2.12
HDAC2-207ENST00000520170 PUS7Q96PZ0 661 aaKnown RBP28.28■■■□□ 2.12
HDAC2-207ENST00000520170 LTV1Q96GA3 475 aaPredicted RBP28.27■■■□□ 2.12
HDAC2-207ENST00000520170 IP6K1Q92551 441 aa28.26■■■□□ 2.11
HDAC2-207ENST00000520170 ST20-MTHFSA0A0A6YYL1 179 aa28.23■■■□□ 2.11
HDAC2-207ENST00000520170 DDX54Q8TDD1 881 aaKnown RBP28.22■■■□□ 2.11
HDAC2-207ENST00000520170 TESK2Q96S53 571 aa28.22■■■□□ 2.11
HDAC2-207ENST00000520170 MTFR1LQ9H019 292 aa28.22■■■□□ 2.11
HDAC2-207ENST00000520170 COG3Q96JB2 828 aa28.21■■■□□ 2.11
HDAC2-207ENST00000520170 FAM208AQ9UK61 1670 aaKnown RBP28.21■■■□□ 2.11
HDAC2-207ENST00000520170 FHDC1Q9C0D6 1143 aaPredicted RBP28.19■■■□□ 2.1
HDAC2-207ENST00000520170 RGPD2P0DJD1 1756 aa28.19■■■□□ 2.1
HDAC2-207ENST00000520170 PAPPAQ13219 1627 aa28.18■■■□□ 2.1
HDAC2-207ENST00000520170 FBLN1P23142 703 aa28.18■■■□□ 2.1
HDAC2-207ENST00000520170 AMPHP49418 695 aa28.17■■■□□ 2.1
HDAC2-207ENST00000520170 SYT17Q9BSW7 474 aa28.17■■■□□ 2.1
HDAC2-207ENST00000520170 LRRC4BQ9NT99 713 aa28.17■■■□□ 2.1
HDAC2-207ENST00000520170 MAP3K19Q56UN5 1328 aa28.17■■■□□ 2.1
HDAC2-207ENST00000520170 HOXC9P31274 260 aa28.16■■■□□ 2.1
HDAC2-207ENST00000520170 ZNF827Q17R98 1081 aa28.16■■■□□ 2.1
HDAC2-207ENST00000520170 SGIP1Q9BQI5 828 aa28.15■■■□□ 2.1
HDAC2-207ENST00000520170 SLC24A1O60721 1099 aa28.13■■■□□ 2.09
HDAC2-207ENST00000520170 SYTL4Q96C24 671 aaPredicted RBP28.13■■■□□ 2.09
HDAC2-207ENST00000520170 ARXQ96QS3 562 aa28.12■■■□□ 2.09
HDAC2-207ENST00000520170 PRIM1P49642 420 aaKnown RBP28.1■■■□□ 2.09
HDAC2-207ENST00000520170 ANKRD36BQ8N2N9 1353 aa28.1■■■□□ 2.09
HDAC2-207ENST00000520170 SLC27A3Q5K4L6 730 aa28.09■■■□□ 2.09
HDAC2-207ENST00000520170 ZCRB1Q8TBF4 217 aaKnown RBP28.09■■■□□ 2.09
HDAC2-207ENST00000520170 DOT1LQ8TEK3 1739 aa28.09■■■□□ 2.09
HDAC2-207ENST00000520170 KCNQ4P56696 695 aa28.08■■■□□ 2.09
HDAC2-207ENST00000520170 AKT1S1Q96B36 256 aa28.08■■■□□ 2.09
HDAC2-207ENST00000520170 UTRNP46939 3433 aa28.08■■■□□ 2.09
HDAC2-207ENST00000520170 SHANK3Q9BYB0 1731 aa28.07■■■□□ 2.08
HDAC2-207ENST00000520170 RRS1Q15050 365 aaKnown RBP28.07■■■□□ 2.08
HDAC2-207ENST00000520170 GGNBP2Q9H3C7 697 aa28.07■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms