RNA–Protein interactions for RNA: ENST00000519336.1

LINC01339-203, Transcript of long intergenic non-protein coding RNA 1339, humanhuman

TSL 3 BASIC

Gene LINC01339, Length 561 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01339-203ENST00000519336 CCDC9Q9Y3X0 531 aaKnown RBP8.63□□□□□ -1.03
LINC01339-203ENST00000519336 GIGYF1O75420 1035 aaPredicted RBP8.62□□□□□ -1.03
LINC01339-203ENST00000519336 ERFEQ4G0M1 354 aa8.62□□□□□ -1.03
LINC01339-203ENST00000519336 PHTF2Q8N3S3 785 aa8.62□□□□□ -1.03
LINC01339-203ENST00000519336 BRD1O95696 1058 aa8.61□□□□□ -1.03
LINC01339-203ENST00000519336 TSGA10IPQ3SY00 556 aa8.61□□□□□ -1.03
LINC01339-203ENST00000519336 OXLD1Q5BKU9 147 aa8.61□□□□□ -1.03
LINC01339-203ENST00000519336 SH3RF1Q7Z6J0 888 aa8.61□□□□□ -1.03
LINC01339-203ENST00000519336 HCSTQ9UBK5 93 aa8.61□□□□□ -1.03
LINC01339-203ENST00000519336 DOLKQ9UPQ8 538 aa8.61□□□□□ -1.03
LINC01339-203ENST00000519336 USP17L15C9J2P7 530 aa8.6□□□□□ -1.03
LINC01339-203ENST00000519336 USP17L10C9JJH3 530 aa8.6□□□□□ -1.03
LINC01339-203ENST00000519336 USP17L13C9JLJ4 530 aa8.6□□□□□ -1.03
LINC01339-203ENST00000519336 USP17L12C9JPN9 530 aa8.6□□□□□ -1.03
LINC01339-203ENST00000519336 USP17L11C9JVI0 530 aa8.6□□□□□ -1.03
LINC01339-203ENST00000519336 USP17L21D6R901 530 aa8.6□□□□□ -1.03
LINC01339-203ENST00000519336 USP17L18D6R9N7 530 aa8.6□□□□□ -1.03
LINC01339-203ENST00000519336 USP17L22D6RA61 530 aa8.6□□□□□ -1.03
LINC01339-203ENST00000519336 USP17L17D6RBQ6 530 aa8.6□□□□□ -1.03
LINC01339-203ENST00000519336 USP17L19D6RCP7 530 aa8.6□□□□□ -1.03
LINC01339-203ENST00000519336 USP17L20D6RJB6 530 aa8.6□□□□□ -1.03
LINC01339-203ENST00000519336 ATP5J2-PTCD1G3V325 749 aa8.6□□□□□ -1.03
LINC01339-203ENST00000519336 RAB15P59190 212 aa8.6□□□□□ -1.03
LINC01339-203ENST00000519336 USP17L24Q0WX57 530 aa8.6□□□□□ -1.03
LINC01339-203ENST00000519336 MAP7D1Q3KQU3 841 aa8.6□□□□□ -1.03
LINC01339-203ENST00000519336 CRTC2Q53ET0 693 aaPredicted RBP8.6□□□□□ -1.03
LINC01339-203ENST00000519336 C4orf48Q5BLP8 95 aa8.6□□□□□ -1.03
LINC01339-203ENST00000519336 STK32AQ8WU08 396 aa8.6□□□□□ -1.03
LINC01339-203ENST00000519336 TMEM88BA6NKF7 163 aa8.59□□□□□ -1.03
LINC01339-203ENST00000519336 PATL2C9JE40 543 aaKnown RBP8.59□□□□□ -1.03
LINC01339-203ENST00000519336 LZTS3O60299 673 aaPredicted RBP8.59□□□□□ -1.03
LINC01339-203ENST00000519336 GGCXP38435 758 aa8.59□□□□□ -1.03
LINC01339-203ENST00000519336 SH3BP2P78314 561 aa8.59□□□□□ -1.03
LINC01339-203ENST00000519336 TMEM164Q5U3C3 297 aa8.59□□□□□ -1.03
LINC01339-203ENST00000519336 ZNF594Q96JF6 807 aaPredicted RBP8.59□□□□□ -1.03
LINC01339-203ENST00000519336 CCDC85AQ96PX6 553 aaPredicted RBP8.59□□□□□ -1.03
LINC01339-203ENST00000519336 ZMIZ1Q9ULJ6 1067 aa8.59□□□□□ -1.03
LINC01339-203ENST00000519336 NOD1Q9Y239 953 aa8.59□□□□□ -1.03
LINC01339-203ENST00000519336 FAM196BA6NMK8 535 aa8.58□□□□□ -1.04
LINC01339-203ENST00000519336 RNF223E7ERA6 249 aa8.58□□□□□ -1.04
LINC01339-203ENST00000519336 KCNA1Q09470 495 aa8.58□□□□□ -1.04
LINC01339-203ENST00000519336 ELOAQ14241 798 aaKnown RBP8.58□□□□□ -1.04
LINC01339-203ENST00000519336 NBPF20Q3BBV1 942 aa8.58□□□□□ -1.04
LINC01339-203ENST00000519336 RNF20Q5VTR2 975 aa8.58□□□□□ -1.04
LINC01339-203ENST00000519336 FAM200AQ8TCP9 573 aa8.58□□□□□ -1.04
LINC01339-203ENST00000519336 RNF166Q96A37 237 aaPredicted RBP8.58□□□□□ -1.04
LINC01339-203ENST00000519336 TMCO4Q5TGY1 634 aa8.57□□□□□ -1.04
LINC01339-203ENST00000519336 TRIM50Q86XT4 487 aa8.57□□□□□ -1.04
LINC01339-203ENST00000519336 OGFOD1Q8N543 542 aa8.57□□□□□ -1.04
LINC01339-203ENST00000519336 PCDHB11Q9Y5F2 797 aa8.57□□□□□ -1.04
LINC01339-203ENST00000519336 PSME1Q06323 249 aa8.56□□□□□ -1.04
LINC01339-203ENST00000519336 TRIM32Q13049 653 aa8.56□□□□□ -1.04
LINC01339-203ENST00000519336 PTK7Q13308 1070 aa8.56□□□□□ -1.04
LINC01339-203ENST00000519336 TRAF7Q6Q0C0 670 aa8.56□□□□□ -1.04
LINC01339-203ENST00000519336 DNAAF2Q9NVR5 837 aaKnown RBP8.56□□□□□ -1.04
LINC01339-203ENST00000519336 RBM19Q9Y4C8 960 aaKnown RBP8.56□□□□□ -1.04
LINC01339-203ENST00000519336 ATP1A2P50993 1020 aa8.55□□□□□ -1.04
LINC01339-203ENST00000519336 ARID5BQ14865 1188 aa8.55□□□□□ -1.04
LINC01339-203ENST00000519336 PLA2G2CQ5R387 149 aa8.55□□□□□ -1.04
LINC01339-203ENST00000519336 B4GALNT3Q6L9W6 998 aa8.55□□□□□ -1.04
LINC01339-203ENST00000519336 ANKMY2Q8IV38 441 aa8.55□□□□□ -1.04
LINC01339-203ENST00000519336 ANKLE1Q8NAG6 615 aa8.55□□□□□ -1.04
LINC01339-203ENST00000519336 CHIC2Q9UKJ5 165 aa8.55□□□□□ -1.04
LINC01339-203ENST00000519336 GTF2IP78347 998 aa8.54□□□□□ -1.04
LINC01339-203ENST00000519336 CLDN10P78369 228 aa8.54□□□□□ -1.04
LINC01339-203ENST00000519336 DPYDQ12882 1025 aa8.54□□□□□ -1.04
LINC01339-203ENST00000519336 CDCA7Q9BWT1 371 aaPredicted RBP8.54□□□□□ -1.04
LINC01339-203ENST00000519336 C1QTNF2Q9BXJ5 285 aa8.54□□□□□ -1.04
LINC01339-203ENST00000519336 CDV3Q9UKY7 258 aaKnown RBP8.54□□□□□ -1.04
LINC01339-203ENST00000519336 IVNS1ABPQ9Y6Y0 642 aa8.54□□□□□ -1.04
LINC01339-203ENST00000519336 ITGBL1O95965 494 aaPredicted RBP8.53□□□□□ -1.04
LINC01339-203ENST00000519336 PPP1R18Q6NYC8 613 aa8.53□□□□□ -1.04
LINC01339-203ENST00000519336 VASH1Q7L8A9 365 aaPredicted RBP8.53□□□□□ -1.04
LINC01339-203ENST00000519336 KCTD15Q96SI1 283 aaPredicted RBP8.53□□□□□ -1.04
LINC01339-203ENST00000519336 ESF1Q9H501 851 aaKnown RBP8.53□□□□□ -1.04
LINC01339-203ENST00000519336 VARSP26640 1264 aaKnown RBP8.52□□□□□ -1.05
LINC01339-203ENST00000519336 SKOR1P84550 965 aa8.52□□□□□ -1.05
LINC01339-203ENST00000519336 USP4Q13107 963 aa8.52□□□□□ -1.05
LINC01339-203ENST00000519336 EHBP1Q8NDI1 1231 aa8.52□□□□□ -1.05
LINC01339-203ENST00000519336 SIRT1Q96EB6 747 aa8.52□□□□□ -1.05
LINC01339-203ENST00000519336 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.52□□□□□ -1.05
LINC01339-203ENST00000519336 WNT7BP56706 349 aa8.51□□□□□ -1.05
LINC01339-203ENST00000519336 TRMT44Q8IYL2 757 aaKnown RBP8.51□□□□□ -1.05
LINC01339-203ENST00000519336 LARGE2Q8N3Y3 721 aa8.51□□□□□ -1.05
LINC01339-203ENST00000519336 ESPNB1AK53 854 aa8.5□□□□□ -1.05
LINC01339-203ENST00000519336 CD2BP2O95400 341 aaKnown RBP8.5□□□□□ -1.05
LINC01339-203ENST00000519336 MYCP01106 439 aaPredicted RBP8.5□□□□□ -1.05
LINC01339-203ENST00000519336 CCDC102BQ68D86 513 aa8.5□□□□□ -1.05
LINC01339-203ENST00000519336 SEPT12Q8IYM1 358 aa8.5□□□□□ -1.05
LINC01339-203ENST00000519336 TPCN2Q8NHX9 752 aa8.5□□□□□ -1.05
LINC01339-203ENST00000519336 KIAA1024Q9UPX6 916 aa8.5□□□□□ -1.05
LINC01339-203ENST00000519336 MFAP1P55081 439 aaKnown RBP8.49□□□□□ -1.05
LINC01339-203ENST00000519336 RC3H1Q5TC82 1133 aaKnown RBP8.49□□□□□ -1.05
LINC01339-203ENST00000519336 NPM2Q86SE8 214 aaKnown RBP8.49□□□□□ -1.05
LINC01339-203ENST00000519336 SPNS2Q8IVW8 549 aa8.49□□□□□ -1.05
LINC01339-203ENST00000519336 PCDH10Q9P2E7 1040 aa8.49□□□□□ -1.05
LINC01339-203ENST00000519336 SFI1A8K8P3 1242 aa8.48□□□□□ -1.05
LINC01339-203ENST00000519336 ZBTB7BO15156 539 aaPredicted RBP8.48□□□□□ -1.05
LINC01339-203ENST00000519336 RPIAP49247 311 aa8.48□□□□□ -1.05
LINC01339-203ENST00000519336 SEC13P55735 322 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms